Cow genome map

Conread name: rcte39_n4.y1

Conread position: 1-139
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 42

Conread position: 1-145
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 98, 53

Conread position: 1-187
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1-192
Cow position:
Alignm length: 192
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-192
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 1-199
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 149, 53

Conread position: 1-202
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 1-211
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 1-217
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 1-220
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-226
Cow position:
Alignm length: 226
Alignm identity: 164
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 1-229
Cow position:
Alignm length: 229
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-230
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 126, 35

Conread position: 1-232
Cow position:
Alignm length: 232
Alignm identity: 174
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 42, 0

Conread position: 1-232
Cow position:
Alignm length: 232
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-235
Cow position:
Alignm length: 235
Alignm identity: 171
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-236
Cow position:
Alignm length: 236
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 181
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 178
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 244
Alignm identity: 179
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 129, 37

Conread position: 1-242
Cow position:
Alignm length: 242
Alignm identity: 182
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 43, 0

Conread position: 1-250
Cow position:
Alignm length: 251
Alignm identity: 179
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 117, 53

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 174
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-252
Cow position:
Alignm length: 253
Alignm identity: 172
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 126, 51

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 257
Alignm identity: 179
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 99, 53

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 180
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 166, 42

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 187
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 220, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 166, 46

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 255
Alignm identity: 182
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 117, 42

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 180
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 202, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 255
Alignm identity: 184
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 56, 82

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 257
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 40

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 42, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-254
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 175
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 43

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 42, 0

Conread position: 1-256
Cow position:
Alignm length: 261
Alignm identity: 187
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 214, 53

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 42

Conread position: 1-256
Cow position:
Alignm length: 266
Alignm identity: 199
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 127, 46

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 189
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 131, 47

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-189
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 2-192
Cow position:
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 2-235
Cow position:
Alignm length: 234
Alignm identity: 176
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 54, 0

Conread position: 2-246
Cow position:
Alignm length: 245
Alignm identity: 177
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 69, 0

Conread position: 2-248
Cow position:
Alignm length: 247
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 0

Conread position: 2-252
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 2-252
Cow position:
Alignm length: 251
Alignm identity: 176
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 2-252
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 71, 0

Conread position: 2-252
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 177, 45

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 52, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-255
Cow position:
Alignm length: 259
Alignm identity: 190
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 182, 15

Conread position: 2-255
Cow position:
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 2-255
Cow position:
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-256
Cow position:
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 71

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 45

Conread position: 2-257
Cow position:
Alignm length: 256
Alignm identity: 186
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 52, 0

Conread position: 2-257
Cow position:
Alignm length: 257
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 217, 45

Conread position: 2-257
Cow position:
Alignm length: 260
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 75

Conread position: 3-139
Cow position:
Alignm length: 137
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 3-174
Cow position:
Alignm length: 172
Alignm identity: 138
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 40, 0

Conread position: 3-204
Cow position:
Alignm length: 202
Alignm identity: 160
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 16, 0

Conread position: 3-218
Cow position:
Alignm length: 216
Alignm identity: 168
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 44, 0

Conread position: 3-250
Cow position:
Alignm length: 248
Alignm identity: 182
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 44, 0

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 4-239
Cow position:
Alignm length: 236
Alignm identity: 179
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 4-252
Cow position:
Alignm length: 257
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 194

Conread position: 4-257
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 76, 39

Conread position: 4-257
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 5-137
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 5-250
Cow position:
Alignm length: 246
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 5-253
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 5-256
Cow position:
Alignm length: 260
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 41

Conread position: 5-256
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 88, 38

Conread position: 5-256
Cow position:
Alignm length: 252
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 5-256
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 154, 42

Conread position: 6-256
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 48, 0

Conread position: 10-226
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 59

Conread position: 13-253
Cow position:
Alignm length: 241
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 29-256
Cow position:
Alignm length: 228
Alignm identity: 174
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 7, 0

Conread position: 40-256
Cow position:
Alignm length: 219
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 43

Conread position: 79-241
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 89-235
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 94-253
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.