Cow genome map

Conread name: rcte39_n4.y1

Conread position: 1-145
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 1-184
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1-186
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1-187
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 1-199
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 54, 0

Conread position: 1-199
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-199
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 166, 46

Conread position: 1-202
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 183, 53

Conread position: 1-211
Cow position:
Alignm length: 211
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 46, 0

Conread position: 1-218
Cow position:
Alignm length: 219
Alignm identity: 164
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 202, 11

Conread position: 1-232
Cow position:
Alignm length: 233
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 42

Conread position: 1-235
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-239
Cow position:
Alignm length: 240
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 9

Conread position: 1-240
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 167, 9

Conread position: 1-241
Cow position:
Alignm length: 242
Alignm identity: 173
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 144, 53

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 172
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 242
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 24

Conread position: 1-242
Cow position:
Alignm length: 242
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 1-249
Cow position:
Alignm length: 250
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 45

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 177
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 166, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 174
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 255
Alignm identity: 183
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 126, 42

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 63, 37

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 187
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 165, 53

Conread position: 1-253
Cow position:
Alignm length: 255
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 71, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 183
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 166, 53

Conread position: 1-253
Cow position:
Alignm length: 261
Alignm identity: 179
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 70, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 158, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 88

Conread position: 1-254
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 235, 42

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 46

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 146, 42

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 192
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 183, 36

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 186
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 258
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 14

Conread position: 1-257
Cow position:
Alignm length: 257
Alignm identity: 193
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 0

Conread position: 1-257
Cow position:
Alignm length: 258
Alignm identity: 189
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 141, 36

Conread position: 2-192
Cow position:
Alignm length: 191
Alignm identity: 150
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 45, 0

Conread position: 2-230
Cow position:
Alignm length: 230
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 30

Conread position: 2-241
Cow position:
Alignm length: 240
Alignm identity: 171
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 2-251
Cow position:
Alignm length: 250
Alignm identity: 181
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 52, 0

Conread position: 2-251
Cow position:
Alignm length: 250
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-252
Cow position:
Alignm length: 251
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-253
Cow position:
Alignm length: 255
Alignm identity: 192
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 34, 73

Conread position: 2-253
Cow position:
Alignm length: 253
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 44

Conread position: 2-255
Cow position:
Alignm length: 259
Alignm identity: 193
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 177, 43

Conread position: 2-255
Cow position:
Alignm length: 254
Alignm identity: 183
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 71, 0

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 180
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 29

Conread position: 2-256
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 245, 41

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-256
Cow position:
Alignm length: 258
Alignm identity: 178
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 156, 45

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 186
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 13, 47

Conread position: 2-256
Cow position:
Alignm length: 256
Alignm identity: 191
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 44, 70

Conread position: 2-257
Cow position:
Alignm length: 258
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 46

Conread position: 3-164
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 3-178
Cow position:
Alignm length: 177
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 164, 51

Conread position: 3-206
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 3-230
Cow position:
Alignm length: 228
Alignm identity: 175
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 44, 0

Conread position: 3-232
Cow position:
Alignm length: 230
Alignm identity: 161
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 51, 0

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 40, 0

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 51, 0

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 51, 0

Conread position: 3-254
Cow position:
Alignm length: 258
Alignm identity: 186
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 164, 51

Conread position: 3-256
Cow position:
Alignm length: 254
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 3-256
Cow position:
Alignm length: 254
Alignm identity: 183
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 51, 0

Conread position: 4-253
Cow position:
Alignm length: 251
Alignm identity: 175
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 179, 43

Conread position: 4-253
Cow position:
Alignm length: 250
Alignm identity: 182
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 4-256
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 44, 0

Conread position: 4-256
Cow position:
Alignm length: 253
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 5-256
Cow position:
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 6-243
Cow position:
Alignm length: 238
Alignm identity: 172
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 10-257
Cow position:
Alignm length: 248
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 13-230
Cow position:
Alignm length: 219
Alignm identity: 167
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 114, 40

Conread position: 13-238
Cow position:
Alignm length: 226
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 14-239
Cow position:
Alignm length: 232
Alignm identity: 165
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 33, 58

Conread position: 14-256
Cow position:
Alignm length: 243
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 14-257
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 0

Conread position: 26-256
Cow position:
Alignm length: 231
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 45-252
Cow position:
Alignm length: 209
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 28

Conread position: 45-255
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 46-256
Cow position:
Alignm length: 216
Alignm identity: 166
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 72, 37

Conread position: 67-253
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 106, 0

Conread position: 78-197
Cow position:
Alignm length: 120
Alignm identity: 101
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 80-253
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 104-256
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 124, 0

Show alignments to all cow chromosomes.