Cow genome map

Conread name: rcte39_n4.y1

Conread position: 1-132
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 1-150
Cow position:
Alignm length: 150
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 1-166
Cow position:
Alignm length: 167
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 124, 42

Conread position: 1-186
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 1-188
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 174, 53

Conread position: 1-188
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 1-188
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 1-203
Cow position:
Alignm length: 203
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-230
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 1-230
Cow position:
Alignm length: 230
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-232
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 46, 0

Conread position: 1-239
Cow position:
Alignm length: 239
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-239
Cow position:
Alignm length: 240
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 41

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 176
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 246
Alignm identity: 184
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 166, 53

Conread position: 1-242
Cow position:
Alignm length: 249
Alignm identity: 182
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 148, 42

Conread position: 1-246
Cow position:
Alignm length: 246
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 1-247
Cow position:
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-249
Cow position:
Alignm length: 249
Alignm identity: 173
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-250
Cow position:
Alignm length: 252
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 95, 46

Conread position: 1-251
Cow position:
Alignm length: 251
Alignm identity: 187
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 52, 0

Conread position: 1-251
Cow position:
Alignm length: 251
Alignm identity: 178
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 46, 0

Conread position: 1-251
Cow position:
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 1-252
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 103, 42

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 102, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 257
Alignm identity: 190
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 174, 42

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 175
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 224, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 7, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 46

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 42, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 187
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 166, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 258
Alignm identity: 189
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 69, 41

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 54, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-253
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 191, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 92, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 262
Alignm identity: 187
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 146, 53

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-254
Cow position:
Alignm length: 255
Alignm identity: 182
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 33, 54

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 119, 45

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-256
Cow position:
Alignm length: 263
Alignm identity: 190
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 35, 86

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 196
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 194
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 11, 47

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 42

Conread position: 1-256
Cow position:
Alignm length: 259
Alignm identity: 182
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 135, 54

Conread position: 1-257
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 2-139
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 2-162
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 2-200
Cow position:
Alignm length: 199
Alignm identity: 160
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 41, 0

Conread position: 2-202
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 2-208
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 0

Conread position: 2-246
Cow position:
Alignm length: 245
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 2-250
Cow position:
Alignm length: 250
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 121, 71

Conread position: 2-250
Cow position:
Alignm length: 249
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 125, 52

Conread position: 2-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 88, 52

Conread position: 2-253
Cow position:
Alignm length: 254
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 144, 45

Conread position: 2-255
Cow position:
Alignm length: 254
Alignm identity: 183
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 2-256
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 74, 46

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 0

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 179
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 226, 51

Conread position: 2-257
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 3-138
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 3-239
Cow position:
Alignm length: 237
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 3-252
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 44, 0

Conread position: 3-252
Cow position:
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 3-252
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 140, 40

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 179
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 44, 0

Conread position: 3-253
Cow position:
Alignm length: 252
Alignm identity: 188
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 108, 40

Conread position: 3-256
Cow position:
Alignm length: 255
Alignm identity: 192
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 134, 42

Conread position: 3-256
Cow position:
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 3-257
Cow position:
Alignm length: 260
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 40, 84

Conread position: 4-238
Cow position:
Alignm length: 235
Alignm identity: 173
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 4-253
Cow position:
Alignm length: 250
Alignm identity: 182
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 50, 0

Conread position: 4-256
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 50, 0

Conread position: 4-256
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 42, 0

Conread position: 5-252
Cow position:
Alignm length: 251
Alignm identity: 186
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 197, 26

Conread position: 5-252
Cow position:
Alignm length: 250
Alignm identity: 182
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 95, 20

Conread position: 5-256
Cow position:
Alignm length: 252
Alignm identity: 183
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 49, 0

Conread position: 9-218
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 32, 0

Conread position: 24-239
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 83, 30

Conread position: 44-256
Cow position:
Alignm length: 214
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 27

Conread position: 44-257
Cow position:
Alignm length: 214
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 47-256
Cow position:
Alignm length: 210
Alignm identity: 161
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 36, 0

Conread position: 74-239
Cow position:
Alignm length: 167
Alignm identity: 130
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 77, 0

Conread position: 74-256
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 96, 0

Conread position: 79-253
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.