Cow genome map

Conread name: rcte39_n4.y1

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 1-145
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 1-149
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 1-179
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 1-184
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 1-209
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 103, 52

Conread position: 1-230
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 1-231
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-239
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 26, 47

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 1-242
Cow position:
Alignm length: 242
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 1-252
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 205, 46

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 37, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 39

Conread position: 1-253
Cow position:
Alignm length: 262
Alignm identity: 183
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 129

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 259
Alignm identity: 182
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 57

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 33, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 174

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 174
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 166, 55

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-253
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-254
Cow position:
Alignm length: 254
Alignm identity: 180
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 1-254
Cow position:
Alignm length: 254
Alignm identity: 175
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 1-254
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 181
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 1-255
Cow position:
Alignm length: 255
Alignm identity: 180
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 187
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 167, 53

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 258
Alignm identity: 190
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 172, 42

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 261
Alignm identity: 194
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 68, 18

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 46, 0

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 45, 0

Conread position: 1-256
Cow position:
Alignm length: 257
Alignm identity: 189
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 177, 42

Conread position: 1-257
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 53, 0

Conread position: 1-257
Cow position:
Alignm length: 257
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 1-257
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 1-257
Cow position:
Alignm length: 257
Alignm identity: 197
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 54, 0

Conread position: 2-191
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 101, 41

Conread position: 2-210
Cow position:
Alignm length: 209
Alignm identity: 128
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 2-235
Cow position:
Alignm length: 234
Alignm identity: 174
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 45, 0

Conread position: 2-236
Cow position:
Alignm length: 235
Alignm identity: 176
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 41, 0

Conread position: 2-240
Cow position:
Alignm length: 239
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 0

Conread position: 2-241
Cow position:
Alignm length: 241
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 126, 41

Conread position: 2-247
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 2-253
Cow position:
Alignm length: 255
Alignm identity: 171
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 184, 45

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 178
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 2-253
Cow position:
Alignm length: 252
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 51, 0

Conread position: 2-253
Cow position:
Alignm length: 265
Alignm identity: 202
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 69, 45

Conread position: 2-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 165, 52

Conread position: 2-253
Cow position:
Alignm length: 254
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 55

Conread position: 2-255
Cow position:
Alignm length: 254
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 2-255
Cow position:
Alignm length: 262
Alignm identity: 192
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 33, 52

Conread position: 2-255
Cow position:
Alignm length: 254
Alignm identity: 188
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 45, 0

Conread position: 2-256
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 141, 41

Conread position: 2-256
Cow position:
Alignm length: 255
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-257
Cow position:
Alignm length: 256
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-257
Cow position:
Alignm length: 256
Alignm identity: 177
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 3-250
Cow position:
Alignm length: 249
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 142, 51

Conread position: 3-253
Cow position:
Alignm length: 252
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 122, 44

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 180
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 44, 0

Conread position: 3-253
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 162, 19

Conread position: 3-253
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 192, 44

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 176
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 51, 0

Conread position: 3-256
Cow position:
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 41

Conread position: 3-257
Cow position:
Alignm length: 255
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 4-253
Cow position:
Alignm length: 250
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 63, 0

Conread position: 4-256
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 108, 43

Conread position: 5-254
Cow position:
Alignm length: 251
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 20

Conread position: 12-256
Cow position:
Alignm length: 246
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 35

Conread position: 13-256
Cow position:
Alignm length: 244
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 25-252
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 209, 22

Conread position: 79-256
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 80-241
Cow position:
Alignm length: 162
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 80-256
Cow position:
Alignm length: 178
Alignm identity: 139
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 98, 102

Conread position: 89-256
Cow position:
Alignm length: 169
Alignm identity: 133
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 33, 0

Conread position: 91-248
Cow position:
Alignm length: 158
Alignm identity: 127
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 0

Show alignments to all cow chromosomes.