Cow genome map


           Conread name:
           rcut09_p6.y1
        

               Conread position:
               19-241
               

               Cow position:
               chr15:48679386-48679600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               22-253
               

               Cow position:
               chr15:17086909-17086682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               127, 35
               

               Conread position:
               22-257
               

               Cow position:
               chr15:1004946-1005181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               126, 74
               

               Conread position:
               30-252
               

               Cow position:
               chr15:24734311-24734518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               35-244
               

               Cow position:
               chr15:37120321-37120517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               35-249
               

               Cow position:
               chr15:24289328-24289540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               53, 104
               

               Conread position:
               35-249
               

               Cow position:
               chr15:27064737-27064528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               113, 144
               

               Conread position:
               35-256
               

               Cow position:
               chr15:44217137-44216913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               31, 66
               

               Conread position:
               41-252
               

               Cow position:
               chr15:40211457-40211247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               42-205
               

               Cow position:
               chr15:27028278-27028436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               67-246
               

               Cow position:
               chr15:49569228-49569062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               111-250
               

               Cow position:
               chr15:29598296-29598439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               36, 92
               
Show alignments to all cow chromosomes.