Cow genome map


           Conread name:
           rcut09_p6.y1
        

               Conread position:
               29-249
               

               Cow position:
               chr17:8476128-8475913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               119, 36
               

               Conread position:
               30-244
               

               Cow position:
               chr17:2502944-2502728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               118, 22
               

               Conread position:
               30-246
               

               Cow position:
               chr17:14632097-14632313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               34-238
               

               Cow position:
               chr17:19778399-19778194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               114, 60
               

               Conread position:
               36-250
               

               Cow position:
               chr17:36063753-36063542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               112, 54
               

               Conread position:
               41-259
               

               Cow position:
               chr17:5818161-5818378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               107, 41
               

               Conread position:
               44-252
               

               Cow position:
               chr17:11797659-11797449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               104, 62
               

               Conread position:
               52-254
               

               Cow position:
               chr17:10217055-10216848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               64-247
               

               Cow position:
               chr17:15902322-15902139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               83, 18
               

               Conread position:
               64-254
               

               Cow position:
               chr17:16894923-16894731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               83, 111
               
Show alignments to all cow chromosomes.