Cow genome map


           Conread name:
           rcut09_p6.y1
        

               Conread position:
               22-250
               

               Cow position:
               chr8:45230960-45231184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               218, 43
               

               Conread position:
               22-252
               

               Cow position:
               chr8:7678274-7678496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               124, 49
               

               Conread position:
               23-249
               

               Cow position:
               chr8:6520352-6520132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               112, 22
               

               Conread position:
               30-212
               

               Cow position:
               chr8:18579626-18579799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               36-235
               

               Cow position:
               chr8:9127963-9128157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               40-246
               

               Cow position:
               chr8:6236001-6236198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               7, 58
               

               Conread position:
               42-254
               

               Cow position:
               chr8:48455517-48455733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               44, 89
               

               Conread position:
               49-246
               

               Cow position:
               chr8:2015832-2015643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               131, 69
               

               Conread position:
               63-238
               

               Cow position:
               chr8:39480519-39480347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               87-246
               

               Cow position:
               chr8:23100159-23100319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               61, 13
               

               Conread position:
               103-245
               

               Cow position:
               chr8:51970210-51970069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               111, 39
               

               Conread position:
               106-249
               

               Cow position:
               chr8:38994338-38994193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               45, 69
               
Show alignments to all cow chromosomes.