Cow genome map


           Conread name:
           rcut09_p6.y1
        

               Conread position:
               17-249
               

               Cow position:
               chrX:16859899-16860119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               22-247
               

               Cow position:
               chrX:13234144-13234367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               35, 128
               

               Conread position:
               22-250
               

               Cow position:
               chrX:36854435-36854200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               63, 23
               

               Conread position:
               35-205
               

               Cow position:
               chrX:5119509-5119674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               35-244
               

               Cow position:
               chrX:44500780-44500990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               166
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               17, 12
               

               Conread position:
               35-246
               

               Cow position:
               chrX:3359293-3359503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               10, 66
               

               Conread position:
               35-252
               

               Cow position:
               chrX:6089634-6089848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               62, 47
               

               Conread position:
               79-253
               

               Cow position:
               chrX:42463346-42463506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               84-249
               

               Cow position:
               chrX:6511654-6511819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               48, 97
               

               Conread position:
               96-260
               

               Cow position:
               chrX:24056590-24056433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               26, 45
               
Show alignments to all cow chromosomes.