Cow genome map


           Conread name:
           rcut15_b1.y1
        

               Conread position:
               1-162
               

               Cow position:
               chr29:34687833-34687997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               3-119
               

               Cow position:
               chr29:19244459-19244339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               3-123
               

               Cow position:
               chr29:40299020-40298897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               3-133
               

               Cow position:
               chr29:629538-629671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               6-145
               

               Cow position:
               chr29:11647097-11647239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               7-148
               

               Cow position:
               chr29:25333455-25333313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               45, 35
               

               Conread position:
               15-124
               

               Cow position:
               chr29:33393690-33393802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               25-157
               

               Cow position:
               chr29:1402788-1402926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               34-157
               

               Cow position:
               chr29:11822724-11822600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               18, 31
               

               Conread position:
               59-157
               

               Cow position:
               chr29:26735387-26735487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               35, 0
               
Show alignments to all cow chromosomes.