Cow genome map
| Conread name: | rcut15_b1.y1 |
| Conread position: | 1-116 |
| Cow position: | chr5:55795941-55795822 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 3-116 |
| Cow position: | chr5:44734697-44734581 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 3-117 |
| Cow position: | chr5:4267698-4267814 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 49, 108 |
| Conread position: | 3-127 |
| Cow position: | chr5:57101494-57101369 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 49, 26 |
| Conread position: | 3-131 |
| Cow position: | chr5:35247084-35246951 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 3-140 |
| Cow position: | chr5:66972457-66972597 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 3-146 |
| Cow position: | chr5:57150693-57150841 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 3-158 |
| Cow position: | chr5:43992352-43992510 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 3-159 |
| Cow position: | chr5:49623033-49622875 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 113 |
| Conread position: | 3-159 |
| Cow position: | chr5:54436784-54436942 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 3-159 |
| Cow position: | chr5:54767881-54767722 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 3-167 |
| Cow position: | chr5:63987417-63987250 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 49, 41 |
| Conread position: | 4-124 |
| Cow position: | chr5:42623150-42623028 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 40 |
| Conread position: | 4-129 |
| Cow position: | chr5:29828075-29828203 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 6-127 |
| Cow position: | chr5:70353953-70353828 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 6-128 |
| Cow position: | chr5:51125978-51125854 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 46, 113 |
| Conread position: | 6-139 |
| Cow position: | chr5:59627131-59627267 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 78 |
| Conread position: | 7-117 |
| Cow position: | chr5:37808631-37808518 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 7-135 |
| Cow position: | chr5:49501792-49501661 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 25-150 |
| Cow position: | chr5:4221028-4221155 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 27, 90 |
Show alignments to all cow chromosomes.