Cow genome map

Conread name: rcut32_e21.y1

Conread position: 3-299
Cow position:
Alignm length: 324
Alignm identity: 229
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 11, 5

Conread position: 4-460
Cow position:
Alignm length: 502
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 378

Conread position: 8-296
Cow position:
Alignm length: 317
Alignm identity: 227
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 7, 284

Conread position: 8-299
Cow position:
Alignm length: 319
Alignm identity: 224
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 6, 47

Conread position: 8-460
Cow position:
Alignm length: 489
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 296

Conread position: 9-383
Cow position:
Alignm length: 416
Alignm identity: 285
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 19, 10

Conread position: 10-234
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 75, 10

Conread position: 10-285
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 15-299
Cow position:
Alignm length: 311
Alignm identity: 211
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 13, 34

Conread position: 22-293
Cow position:
Alignm length: 295
Alignm identity: 210
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 15, 0

Conread position: 23-142
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 26-287
Cow position:
Alignm length: 275
Alignm identity: 189
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 99, 138

Conread position: 26-300
Cow position:
Alignm length: 296
Alignm identity: 198
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 27-435
Cow position:
Alignm length: 459
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-435
Cow position:
Alignm length: 455
Alignm identity: 317
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 0

Conread position: 27-459
Cow position:
Alignm length: 483
Alignm identity: 334
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 0

Conread position: 27-460
Cow position:
Alignm length: 461
Alignm identity: 305
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 117

Conread position: 27-460
Cow position:
Alignm length: 480
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 321

Conread position: 27-460
Cow position:
Alignm length: 484
Alignm identity: 328
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 10, 0

Conread position: 29-280
Cow position:
Alignm length: 273
Alignm identity: 196
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 29-298
Cow position:
Alignm length: 295
Alignm identity: 210
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 67

Conread position: 29-299
Cow position:
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 29-451
Cow position:
Alignm length: 462
Alignm identity: 313
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 57, 321

Conread position: 29-459
Cow position:
Alignm length: 464
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 31

Conread position: 29-461
Cow position:
Alignm length: 462
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 86

Conread position: 29-465
Cow position:
Alignm length: 479
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 31-147
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 31-161
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 31-383
Cow position:
Alignm length: 380
Alignm identity: 267
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 53, 123

Conread position: 31-453
Cow position:
Alignm length: 467
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 40

Conread position: 31-460
Cow position:
Alignm length: 484
Alignm identity: 333
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 25, 15

Conread position: 31-460
Cow position:
Alignm length: 478
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 44

Conread position: 31-460
Cow position:
Alignm length: 468
Alignm identity: 311
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 55, 276

Conread position: 31-461
Cow position:
Alignm length: 477
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 31-461
Cow position:
Alignm length: 480
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 32-288
Cow position:
Alignm length: 271
Alignm identity: 202
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 107, 0

Conread position: 35-263
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 49, 12

Conread position: 35-299
Cow position:
Alignm length: 284
Alignm identity: 204
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 52, 5

Conread position: 36-255
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 36-271
Cow position:
Alignm length: 260
Alignm identity: 188
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 36-276
Cow position:
Alignm length: 258
Alignm identity: 179
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 36-288
Cow position:
Alignm length: 276
Alignm identity: 201
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 51, 0

Conread position: 36-288
Cow position:
Alignm length: 276
Alignm identity: 194
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 235

Conread position: 36-288
Cow position:
Alignm length: 276
Alignm identity: 197
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 36-288
Cow position:
Alignm length: 276
Alignm identity: 195
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position:
Alignm length: 264
Alignm identity: 189
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 17, 70

Conread position: 36-288
Cow position:
Alignm length: 278
Alignm identity: 193
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 36-288
Cow position:
Alignm length: 265
Alignm identity: 184
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 17, 125

Conread position: 36-288
Cow position:
Alignm length: 270
Alignm identity: 193
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position:
Alignm length: 276
Alignm identity: 198
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 36-296
Cow position:
Alignm length: 282
Alignm identity: 197
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 253

Conread position: 36-299
Cow position:
Alignm length: 287
Alignm identity: 198
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 36-299
Cow position:
Alignm length: 288
Alignm identity: 201
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 36-299
Cow position:
Alignm length: 287
Alignm identity: 205
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 47, 248

Conread position: 36-299
Cow position:
Alignm length: 287
Alignm identity: 199
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 241

Conread position: 36-299
Cow position:
Alignm length: 294
Alignm identity: 212
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 39, 0

Conread position: 36-299
Cow position:
Alignm length: 285
Alignm identity: 197
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 36-299
Cow position:
Alignm length: 287
Alignm identity: 209
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 47, 0

Conread position: 36-299
Cow position:
Alignm length: 287
Alignm identity: 201
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 243

Conread position: 36-299
Cow position:
Alignm length: 287
Alignm identity: 203
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 50, 31

Conread position: 36-299
Cow position:
Alignm length: 280
Alignm identity: 193
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 36-397
Cow position:
Alignm length: 411
Alignm identity: 288
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 36-434
Cow position:
Alignm length: 448
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-434
Cow position:
Alignm length: 447
Alignm identity: 306
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 49, 0

Conread position: 36-435
Cow position:
Alignm length: 435
Alignm identity: 293
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 50, 179

Conread position: 36-444
Cow position:
Alignm length: 453
Alignm identity: 317
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 50, 64

Conread position: 36-445
Cow position:
Alignm length: 424
Alignm identity: 287
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 51, 221

Conread position: 36-451
Cow position:
Alignm length: 455
Alignm identity: 298
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 91, 314

Conread position: 36-451
Cow position:
Alignm length: 451
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 401

Conread position: 36-459
Cow position:
Alignm length: 473
Alignm identity: 325
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position:
Alignm length: 472
Alignm identity: 326
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 45, 0

Conread position: 36-459
Cow position:
Alignm length: 452
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 201

Conread position: 36-459
Cow position:
Alignm length: 469
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 36-459
Cow position:
Alignm length: 473
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position:
Alignm length: 473
Alignm identity: 331
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 51, 232

Conread position: 36-459
Cow position:
Alignm length: 473
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position:
Alignm length: 473
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position:
Alignm length: 473
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position:
Alignm length: 471
Alignm identity: 324
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 51, 107

Conread position: 36-459
Cow position:
Alignm length: 473
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position:
Alignm length: 473
Alignm identity: 320
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 0

Conread position: 36-459
Cow position:
Alignm length: 473
Alignm identity: 323
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position:
Alignm length: 474
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 36-460
Cow position:
Alignm length: 469
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 36-460
Cow position:
Alignm length: 467
Alignm identity: 317
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 47, 74

Conread position: 36-460
Cow position:
Alignm length: 474
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 36-460
Cow position:
Alignm length: 474
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-460
Cow position:
Alignm length: 474
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 36-460
Cow position:
Alignm length: 474
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-461
Cow position:
Alignm length: 481
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 36-461
Cow position:
Alignm length: 472
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 36-461
Cow position:
Alignm length: 465
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 32

Conread position: 36-461
Cow position:
Alignm length: 475
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-465
Cow position:
Alignm length: 475
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 245

Conread position: 36-465
Cow position:
Alignm length: 478
Alignm identity: 320
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 76, 0

Conread position: 36-493
Cow position:
Alignm length: 479
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 7

Conread position: 37-276
Cow position:
Alignm length: 257
Alignm identity: 177
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 127

Conread position: 37-288
Cow position:
Alignm length: 269
Alignm identity: 183
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 85

Conread position: 37-293
Cow position:
Alignm length: 272
Alignm identity: 191
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 126, 46

Conread position: 37-460
Cow position:
Alignm length: 464
Alignm identity: 321
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 46, 320

Conread position: 39-472
Cow position:
Alignm length: 473
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 10

Conread position: 41-288
Cow position:
Alignm length: 272
Alignm identity: 193
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 43-287
Cow position:
Alignm length: 270
Alignm identity: 195
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 12

Conread position: 43-335
Cow position:
Alignm length: 310
Alignm identity: 222
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 79

Conread position: 44-299
Cow position:
Alignm length: 266
Alignm identity: 185
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 115, 54

Conread position: 46-495
Cow position:
Alignm length: 500
Alignm identity: 335
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 477

Conread position: 54-455
Cow position:
Alignm length: 441
Alignm identity: 306
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 59, 18

Conread position: 64-264
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 118, 17

Conread position: 70-461
Cow position:
Alignm length: 425
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 67

Conread position: 117-369
Cow position:
Alignm length: 278
Alignm identity: 199
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 127-459
Cow position:
Alignm length: 369
Alignm identity: 255
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 127-460
Cow position:
Alignm length: 365
Alignm identity: 256
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 32, 0

Conread position: 127-460
Cow position:
Alignm length: 363
Alignm identity: 250
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 77, 33

Conread position: 127-461
Cow position:
Alignm length: 376
Alignm identity: 263
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 130-365
Cow position:
Alignm length: 261
Alignm identity: 185
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 53, 105

Conread position: 130-436
Cow position:
Alignm length: 332
Alignm identity: 228
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 81, 41

Conread position: 132-459
Cow position:
Alignm length: 369
Alignm identity: 255
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 142-459
Cow position:
Alignm length: 359
Alignm identity: 249
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 195-460
Cow position:
Alignm length: 293
Alignm identity: 201
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 246-461
Cow position:
Alignm length: 224
Alignm identity: 166
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 87, 164

Conread position: 265-460
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 71, 17

Conread position: 270-459
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 280-451
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 280-452
Cow position:
Alignm length: 177
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 280-461
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 53, 160

Conread position: 288-465
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 10

Conread position: 292-461
Cow position:
Alignm length: 178
Alignm identity: 138
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 295-459
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 295-459
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 295-459
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 295-459
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 295-460
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 295-461
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 295-461
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 295-461
Cow position:
Alignm length: 174
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 161

Show alignments to all cow chromosomes.