Cow genome map
| Conread name: | rcut32_e21.y1 |
| Conread position: | 1-451 |
| Cow position: | chr15:23173255-23172783 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 314 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 14, 7 |
| Conread position: | 3-458 |
| Cow position: | chr15:20173174-20172673 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 6-147 |
| Cow position: | chr15:1129177-1129032 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 24, 14 |
| Conread position: | 8-435 |
| Cow position: | chr15:18264941-18264461 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 335 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 8-451 |
| Cow position: | chr15:16784146-16784636 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 345 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 6, 167 |
| Conread position: | 8-459 |
| Cow position: | chr15:45244420-45244912 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 256 |
| Conread position: | 8-460 |
| Cow position: | chr15:17074542-17074038 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 346 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 6, 439 |
| Conread position: | 8-460 |
| Cow position: | chr15:21607595-21608086 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 10-461 |
| Cow position: | chr15:39091375-39090899 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 245 |
| Conread position: | 15-299 |
| Cow position: | chr15:25165275-25164966 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 15-465 |
| Cow position: | chr15:32701902-32701408 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 329 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 13, 91 |
| Conread position: | 24-394 |
| Cow position: | chr15:4895536-4895138 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 135, 62 |
| Conread position: | 25-299 |
| Cow position: | chr15:6648569-6648278 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 26-147 |
| Cow position: | chr15:25909765-25909643 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 26-299 |
| Cow position: | chr15:4629404-4629108 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 26-459 |
| Cow position: | chr15:1774289-1774768 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 327 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 11, 26 |
| Conread position: | 26-459 |
| Cow position: | chr15:6758636-6758153 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 26-461 |
| Cow position: | chr15:20352961-20352485 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 373 |
| Conread position: | 26-461 |
| Cow position: | chr15:51631964-51632409 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 27-180 |
| Cow position: | chr15:32647202-32647366 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-288 |
| Cow position: | chr15:33753438-33753155 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 10, 46 |
| Conread position: | 27-288 |
| Cow position: | chr15:42597410-42597125 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-401 |
| Cow position: | chr15:6563735-6564158 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 290 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 10, 131 |
| Conread position: | 27-434 |
| Cow position: | chr15:7847958-7847509 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 312 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 10, 145 |
| Conread position: | 27-457 |
| Cow position: | chr15:24043618-24044075 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 38 |
| Conread position: | 27-459 |
| Cow position: | chr15:2644504-2644024 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 326 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-459 |
| Cow position: | chr15:4081843-4082308 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 256 |
| Conread position: | 27-459 |
| Cow position: | chr15:7586939-7586464 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 10, 412 |
| Conread position: | 27-460 |
| Cow position: | chr15:7565845-7566327 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 333 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 11, 322 |
| Conread position: | 27-460 |
| Cow position: | chr15:21637113-21637598 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 333 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 10, 93 |
| Conread position: | 27-460 |
| Cow position: | chr15:21806691-21807174 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 28-299 |
| Cow position: | chr15:3721290-3721002 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 9, 29 |
| Conread position: | 29-143 |
| Cow position: | chr15:41359847-41359960 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 69 |
| Conread position: | 29-167 |
| Cow position: | chr15:30045242-30045382 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 29-284 |
| Cow position: | chr15:36423769-36423493 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 8, 82 |
| Conread position: | 29-288 |
| Cow position: | chr15:35404819-35405099 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 29-295 |
| Cow position: | chr15:36356225-36355935 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 29-384 |
| Cow position: | chr15:17237029-17236643 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 210 |
| Conread position: | 29-460 |
| Cow position: | chr15:32065443-32064969 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 30-327 |
| Cow position: | chr15:2592611-2592922 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 57, 16 |
| Conread position: | 30-435 |
| Cow position: | chr15:2590250-2590696 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 318 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 57, 16 |
| Conread position: | 31-284 |
| Cow position: | chr15:23774150-23774419 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 56, 85 |
| Conread position: | 31-285 |
| Cow position: | chr15:13076367-13076643 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 31-288 |
| Cow position: | chr15:13388500-13388222 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 267 |
| Conread position: | 31-460 |
| Cow position: | chr15:20404838-20404358 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 333 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 31-465 |
| Cow position: | chr15:35739087-35739559 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 325 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 60, 90 |
| Conread position: | 36-196 |
| Cow position: | chr15:18191-18359 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 81, 68 |
| Conread position: | 36-234 |
| Cow position: | chr15:3792939-3793159 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-269 |
| Cow position: | chr15:22760152-22759896 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-271 |
| Cow position: | chr15:8102303-8102554 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 36-271 |
| Cow position: | chr15:21644969-21644717 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 51, 135 |
| Conread position: | 36-276 |
| Cow position: | chr15:21940171-21939908 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-278 |
| Cow position: | chr15:2664240-2664502 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 51, 254 |
| Conread position: | 36-279 |
| Cow position: | chr15:35597-35857 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 36 |
| Conread position: | 36-285 |
| Cow position: | chr15:31270019-31269750 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 36-286 |
| Cow position: | chr15:4642055-4642325 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 91, 49 |
| Conread position: | 36-288 |
| Cow position: | chr15:481436-481706 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 47, 85 |
| Conread position: | 36-288 |
| Cow position: | chr15:793908-794179 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 51, 225 |
| Conread position: | 36-288 |
| Cow position: | chr15:2080183-2080457 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 50, 241 |
| Conread position: | 36-288 |
| Cow position: | chr15:2560271-2560546 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-288 |
| Cow position: | chr15:4388599-4388874 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-288 |
| Cow position: | chr15:7985575-7985300 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-288 |
| Cow position: | chr15:9522348-9522072 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 36-288 |
| Cow position: | chr15:16801126-16801401 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-288 |
| Cow position: | chr15:21662890-21662617 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 224 |
| Conread position: | 36-288 |
| Cow position: | chr15:22539985-22539712 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 15 |
| Conread position: | 36-288 |
| Cow position: | chr15:25553994-25554266 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-288 |
| Cow position: | chr15:35750444-35750170 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-288 |
| Cow position: | chr15:36329608-36329333 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-288 |
| Cow position: | chr15:42939763-42940037 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 212 |
| Conread position: | 36-291 |
| Cow position: | chr15:10736420-10736695 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 49, 32 |
| Conread position: | 36-296 |
| Cow position: | chr15:35416448-35416723 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 51, 222 |
| Conread position: | 36-299 |
| Cow position: | chr15:67707-67428 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 36-299 |
| Cow position: | chr15:2015326-2015608 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 24 |
| Conread position: | 36-299 |
| Cow position: | chr15:2899406-2899120 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-299 |
| Cow position: | chr15:5197807-5198093 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-299 |
| Cow position: | chr15:11575159-11574880 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 50, 276 |
| Conread position: | 36-299 |
| Cow position: | chr15:12442377-12442663 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 36-299 |
| Cow position: | chr15:18661339-18661624 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-299 |
| Cow position: | chr15:48556571-48556857 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 36-299 |
| Cow position: | chr15:50344878-50344597 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-301 |
| Cow position: | chr15:5640739-5640452 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 47, 285 |
| Conread position: | 36-401 |
| Cow position: | chr15:26157862-26158267 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 291 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 48, 11 |
| Conread position: | 36-423 |
| Cow position: | chr15:4122636-4123071 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 304 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-433 |
| Cow position: | chr15:677913-678359 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 314 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-435 |
| Cow position: | chr15:3892438-3892884 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 311 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 47, 245 |
| Conread position: | 36-435 |
| Cow position: | chr15:19734947-19734499 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-435 |
| Cow position: | chr15:26591494-26591050 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 306 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-452 |
| Cow position: | chr15:7963183-7962733 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 302 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 50, 60 |
| Conread position: | 36-459 |
| Cow position: | chr15:2533583-2534055 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 323 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-459 |
| Cow position: | chr15:4140057-4139590 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 44, 326 |
| Conread position: | 36-459 |
| Cow position: | chr15:4822217-4821747 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 318 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 36-459 |
| Cow position: | chr15:6616650-6617122 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 324 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 36-459 |
| Cow position: | chr15:7267453-7267925 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-459 |
| Cow position: | chr15:7547719-7548166 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 144 |
| Conread position: | 36-459 |
| Cow position: | chr15:13683195-13683656 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 55 |
| Conread position: | 36-459 |
| Cow position: | chr15:21152969-21152497 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-459 |
| Cow position: | chr15:25463672-25463204 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 326 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 47, 228 |
| Conread position: | 36-459 |
| Cow position: | chr15:45944844-45944374 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-460 |
| Cow position: | chr15:29456-28984 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-460 |
| Cow position: | chr15:442936-442465 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 324 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-460 |
| Cow position: | chr15:1785618-1786084 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 315 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 47, 386 |
| Conread position: | 36-460 |
| Cow position: | chr15:3007986-3007516 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 323 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 47, 58 |
| Conread position: | 36-460 |
| Cow position: | chr15:4214021-4214485 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 322 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 48, 93 |
| Conread position: | 36-460 |
| Cow position: | chr15:6463925-6464386 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 325 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 91, 22 |
| Conread position: | 36-460 |
| Cow position: | chr15:12417858-12417390 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 36-460 |
| Cow position: | chr15:34063808-34064265 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 214 |
| Conread position: | 36-460 |
| Cow position: | chr15:36940530-36940058 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-460 |
| Cow position: | chr15:42727235-42727698 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 206 |
| Conread position: | 36-461 |
| Cow position: | chr15:13546200-13545756 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 86 |
| Conread position: | 36-461 |
| Cow position: | chr15:23666642-23666168 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-461 |
| Cow position: | chr15:35643599-35643140 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 313 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 52, 86 |
| Conread position: | 36-461 |
| Cow position: | chr15:50142111-50142585 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-465 |
| Cow position: | chr15:6065875-6065415 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 309 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 103, 87 |
| Conread position: | 36-465 |
| Cow position: | chr15:42532902-42533368 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 339 |
| Conread position: | 36-471 |
| Cow position: | chr15:14573455-14572987 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 323 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 103, 39 |
| Conread position: | 37-383 |
| Cow position: | chr15:33527706-33527325 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 270 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 37-460 |
| Cow position: | chr15:7574655-7575127 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 315 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 44, 7 |
| Conread position: | 37-460 |
| Cow position: | chr15:28487276-28486818 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 231 |
| Conread position: | 40-198 |
| Cow position: | chr15:29341256-29341091 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 43-460 |
| Cow position: | chr15:37394586-37395027 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 152 |
| Conread position: | 49-444 |
| Cow position: | chr15:23560899-23561329 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 51-460 |
| Cow position: | chr15:5243180-5242732 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 188 |
| Conread position: | 52-261 |
| Cow position: | chr15:10826304-10826534 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 68-460 |
| Cow position: | chr15:22096183-22095750 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 304 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 15, 349 |
| Conread position: | 71-288 |
| Cow position: | chr15:24569166-24568926 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 72-288 |
| Cow position: | chr15:60516-60744 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 143 |
| Conread position: | 76-288 |
| Cow position: | chr15:29811852-29811618 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 76-460 |
| Cow position: | chr15:44260770-44260340 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 292 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 51, 31 |
| Conread position: | 82-460 |
| Cow position: | chr15:17773449-17773024 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 301 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 83-461 |
| Cow position: | chr15:20944272-20944698 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 89-459 |
| Cow position: | chr15:9620494-9620076 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 285 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 127-451 |
| Cow position: | chr15:41793379-41793014 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 127-459 |
| Cow position: | chr15:11596431-11596058 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 127-459 |
| Cow position: | chr15:44576349-44576722 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 133-460 |
| Cow position: | chr15:20458293-20458658 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 148-460 |
| Cow position: | chr15:7263918-7264260 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 34, 246 |
| Conread position: | 178-415 |
| Cow position: | chr15:2920237-2919992 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 181-459 |
| Cow position: | chr15:489256-488951 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 182-420 |
| Cow position: | chr15:30984601-30984846 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 169 |
| Conread position: | 195-460 |
| Cow position: | chr15:2617043-2616756 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 9, 190 |
| Conread position: | 195-461 |
| Cow position: | chr15:6959737-6960022 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 197-459 |
| Cow position: | chr15:34240126-34240415 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 212-461 |
| Cow position: | chr15:44378229-44377967 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 68, 22 |
| Conread position: | 215-461 |
| Cow position: | chr15:33605835-33605568 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 54, 257 |
| Conread position: | 251-461 |
| Cow position: | chr15:22138973-22138756 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 45, 29 |
| Conread position: | 259-448 |
| Cow position: | chr15:12041799-12041996 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 262-435 |
| Cow position: | chr15:39407148-39406968 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 262-459 |
| Cow position: | chr15:6648291-6648089 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 266-435 |
| Cow position: | chr15:2925329-2925503 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 14 |
| Conread position: | 277-460 |
| Cow position: | chr15:13076660-13076850 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 21 |
| Conread position: | 280-460 |
| Cow position: | chr15:36436042-36435855 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 280-461 |
| Cow position: | chr15:37646273-37646086 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 61, 161 |
| Conread position: | 281-451 |
| Cow position: | chr15:22752290-22752114 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 170 |
| Conread position: | 294-451 |
| Cow position: | chr15:19724899-19725063 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 295-433 |
| Cow position: | chr15:13193-13338 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-459 |
| Cow position: | chr15:2663341-2663170 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-459 |
| Cow position: | chr15:13431312-13431483 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-459 |
| Cow position: | chr15:29009199-29009028 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-459 |
| Cow position: | chr15:43757002-43756831 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-460 |
| Cow position: | chr15:20369686-20369855 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 7 |
| Conread position: | 298-461 |
| Cow position: | chr15:24968600-24968430 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.