Cow genome map

Conread name: rcut32_e21.y1

Conread position: 1-296
Cow position:
Alignm length: 307
Alignm identity: 201
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 88

Conread position: 7-460
Cow position:
Alignm length: 500
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 38

Conread position: 7-460
Cow position:
Alignm length: 497
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 166

Conread position: 10-459
Cow position:
Alignm length: 500
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 10-460
Cow position:
Alignm length: 493
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 96

Conread position: 23-299
Cow position:
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 25-146
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 26-288
Cow position:
Alignm length: 287
Alignm identity: 195
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 27-288
Cow position:
Alignm length: 286
Alignm identity: 198
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 27-299
Cow position:
Alignm length: 297
Alignm identity: 210
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 27-399
Cow position:
Alignm length: 423
Alignm identity: 289
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 27-409
Cow position:
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 32

Conread position: 27-459
Cow position:
Alignm length: 480
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-459
Cow position:
Alignm length: 480
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-459
Cow position:
Alignm length: 483
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-459
Cow position:
Alignm length: 483
Alignm identity: 326
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 11, 0

Conread position: 27-459
Cow position:
Alignm length: 483
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-459
Cow position:
Alignm length: 483
Alignm identity: 333
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 0

Conread position: 27-460
Cow position:
Alignm length: 483
Alignm identity: 327
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 11, 0

Conread position: 27-460
Cow position:
Alignm length: 479
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 329

Conread position: 27-461
Cow position:
Alignm length: 485
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 28-293
Cow position:
Alignm length: 290
Alignm identity: 207
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 28-296
Cow position:
Alignm length: 282
Alignm identity: 204
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 56, 120

Conread position: 29-198
Cow position:
Alignm length: 185
Alignm identity: 143
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 29-296
Cow position:
Alignm length: 293
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 9, 64

Conread position: 30-460
Cow position:
Alignm length: 479
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 70

Conread position: 31-284
Cow position:
Alignm length: 277
Alignm identity: 193
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 10

Conread position: 31-291
Cow position:
Alignm length: 280
Alignm identity: 201
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 54, 140

Conread position: 31-291
Cow position:
Alignm length: 283
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 31-291
Cow position:
Alignm length: 275
Alignm identity: 194
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 56, 24

Conread position: 31-299
Cow position:
Alignm length: 273
Alignm identity: 202
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 57, 140

Conread position: 31-460
Cow position:
Alignm length: 467
Alignm identity: 314
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 109, 44

Conread position: 31-460
Cow position:
Alignm length: 475
Alignm identity: 320
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 52, 386

Conread position: 31-461
Cow position:
Alignm length: 478
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 31-461
Cow position:
Alignm length: 454
Alignm identity: 289
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 55, 350

Conread position: 35-302
Cow position:
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 36-270
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 77, 26

Conread position: 36-279
Cow position:
Alignm length: 267
Alignm identity: 192
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 36-285
Cow position:
Alignm length: 273
Alignm identity: 189
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 51, 224

Conread position: 36-288
Cow position:
Alignm length: 271
Alignm identity: 189
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 149

Conread position: 36-288
Cow position:
Alignm length: 275
Alignm identity: 194
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 47, 220

Conread position: 36-288
Cow position:
Alignm length: 276
Alignm identity: 196
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position:
Alignm length: 276
Alignm identity: 191
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position:
Alignm length: 276
Alignm identity: 200
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position:
Alignm length: 270
Alignm identity: 188
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 36-288
Cow position:
Alignm length: 276
Alignm identity: 195
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 148

Conread position: 36-288
Cow position:
Alignm length: 276
Alignm identity: 197
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 36-299
Cow position:
Alignm length: 282
Alignm identity: 200
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 50, 0

Conread position: 36-299
Cow position:
Alignm length: 279
Alignm identity: 204
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 47, 0

Conread position: 36-299
Cow position:
Alignm length: 285
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 36-299
Cow position:
Alignm length: 287
Alignm identity: 202
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 36-299
Cow position:
Alignm length: 277
Alignm identity: 186
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 48, 109

Conread position: 36-432
Cow position:
Alignm length: 415
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 39

Conread position: 36-435
Cow position:
Alignm length: 448
Alignm identity: 304
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 36-458
Cow position:
Alignm length: 472
Alignm identity: 323
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 52, 0

Conread position: 36-459
Cow position:
Alignm length: 472
Alignm identity: 322
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position:
Alignm length: 472
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position:
Alignm length: 472
Alignm identity: 325
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position:
Alignm length: 473
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-460
Cow position:
Alignm length: 468
Alignm identity: 312
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 31

Conread position: 36-460
Cow position:
Alignm length: 474
Alignm identity: 324
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position:
Alignm length: 458
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 60

Conread position: 36-460
Cow position:
Alignm length: 474
Alignm identity: 320
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position:
Alignm length: 464
Alignm identity: 312
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 86, 64

Conread position: 36-460
Cow position:
Alignm length: 471
Alignm identity: 322
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 49, 224

Conread position: 36-460
Cow position:
Alignm length: 469
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 36-460
Cow position:
Alignm length: 475
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 212

Conread position: 36-460
Cow position:
Alignm length: 474
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position:
Alignm length: 467
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 213

Conread position: 36-460
Cow position:
Alignm length: 476
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 68

Conread position: 36-460
Cow position:
Alignm length: 474
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 70

Conread position: 36-460
Cow position:
Alignm length: 455
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 206

Conread position: 36-461
Cow position:
Alignm length: 475
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-461
Cow position:
Alignm length: 475
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-461
Cow position:
Alignm length: 475
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-461
Cow position:
Alignm length: 433
Alignm identity: 278
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 162, 135

Conread position: 36-461
Cow position:
Alignm length: 475
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 199

Conread position: 36-463
Cow position:
Alignm length: 478
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 36-465
Cow position:
Alignm length: 471
Alignm identity: 322
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 44, 31

Conread position: 36-466
Cow position:
Alignm length: 463
Alignm identity: 318
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 98, 47

Conread position: 39-452
Cow position:
Alignm length: 447
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 73

Conread position: 42-284
Cow position:
Alignm length: 263
Alignm identity: 194
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 108, 16

Conread position: 43-200
Cow position:
Alignm length: 172
Alignm identity: 130
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 43-461
Cow position:
Alignm length: 468
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 45-414
Cow position:
Alignm length: 411
Alignm identity: 292
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 38, 0

Conread position: 46-451
Cow position:
Alignm length: 448
Alignm identity: 307
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 41, 0

Conread position: 46-461
Cow position:
Alignm length: 465
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 47-451
Cow position:
Alignm length: 450
Alignm identity: 319
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 21

Conread position: 51-459
Cow position:
Alignm length: 459
Alignm identity: 310
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 52-459
Cow position:
Alignm length: 457
Alignm identity: 310
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 35, 0

Conread position: 52-465
Cow position:
Alignm length: 452
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 209

Conread position: 62-299
Cow position:
Alignm length: 260
Alignm identity: 192
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 26, 204

Conread position: 62-434
Cow position:
Alignm length: 422
Alignm identity: 294
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 60

Conread position: 69-462
Cow position:
Alignm length: 428
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 184

Conread position: 84-458
Cow position:
Alignm length: 397
Alignm identity: 253
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 99, 50

Conread position: 125-465
Cow position:
Alignm length: 372
Alignm identity: 255
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 116

Conread position: 127-458
Cow position:
Alignm length: 373
Alignm identity: 259
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 127-459
Cow position:
Alignm length: 374
Alignm identity: 259
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 127-459
Cow position:
Alignm length: 374
Alignm identity: 261
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 31, 138

Conread position: 127-460
Cow position:
Alignm length: 373
Alignm identity: 260
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 127-461
Cow position:
Alignm length: 376
Alignm identity: 265
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 32, 0

Conread position: 178-461
Cow position:
Alignm length: 310
Alignm identity: 230
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 32, 16

Conread position: 180-461
Cow position:
Alignm length: 304
Alignm identity: 208
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 101, 28

Conread position: 186-461
Cow position:
Alignm length: 304
Alignm identity: 211
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 192-460
Cow position:
Alignm length: 288
Alignm identity: 196
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 13, 215

Conread position: 195-460
Cow position:
Alignm length: 290
Alignm identity: 211
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 9, 218

Conread position: 195-460
Cow position:
Alignm length: 292
Alignm identity: 202
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 234

Conread position: 195-461
Cow position:
Alignm length: 294
Alignm identity: 205
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 195-461
Cow position:
Alignm length: 294
Alignm identity: 204
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 203-460
Cow position:
Alignm length: 286
Alignm identity: 198
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 209-460
Cow position:
Alignm length: 278
Alignm identity: 197
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 64, 33

Conread position: 211-420
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 280-451
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 282-460
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 288-460
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 292-432
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 135

Conread position: 295-448
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 295-458
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 88

Conread position: 295-459
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 295-461
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 295-461
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 298-460
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 298-461
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 141

Show alignments to all cow chromosomes.