Cow genome map

Conread name: rcut32_e21.y1

Conread position: 1-299
Cow position:
Alignm length: 325
Alignm identity: 231
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 18, 0

Conread position: 3-431
Cow position:
Alignm length: 470
Alignm identity: 316
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 11, 0

Conread position: 7-460
Cow position:
Alignm length: 492
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 75

Conread position: 7-460
Cow position:
Alignm length: 506
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 89

Conread position: 8-285
Cow position:
Alignm length: 305
Alignm identity: 206
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 101

Conread position: 8-461
Cow position:
Alignm length: 505
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 16-288
Cow position:
Alignm length: 296
Alignm identity: 205
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 21-459
Cow position:
Alignm length: 489
Alignm identity: 336
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 0

Conread position: 21-471
Cow position:
Alignm length: 496
Alignm identity: 344
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 26

Conread position: 26-288
Cow position:
Alignm length: 287
Alignm identity: 196
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 26-291
Cow position:
Alignm length: 285
Alignm identity: 211
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 11, 0

Conread position: 27-285
Cow position:
Alignm length: 283
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 27-288
Cow position:
Alignm length: 280
Alignm identity: 193
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 27-288
Cow position:
Alignm length: 287
Alignm identity: 199
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 41

Conread position: 27-435
Cow position:
Alignm length: 459
Alignm identity: 320
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 0

Conread position: 27-459
Cow position:
Alignm length: 479
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 336

Conread position: 27-459
Cow position:
Alignm length: 479
Alignm identity: 331
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 10, 145

Conread position: 29-288
Cow position:
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 29-299
Cow position:
Alignm length: 284
Alignm identity: 204
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 8, 186

Conread position: 29-383
Cow position:
Alignm length: 406
Alignm identity: 288
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 8, 0

Conread position: 29-460
Cow position:
Alignm length: 457
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 68

Conread position: 30-285
Cow position:
Alignm length: 260
Alignm identity: 178
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 43

Conread position: 31-147
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 31-147
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 31-196
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 31-288
Cow position:
Alignm length: 281
Alignm identity: 202
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 55, 0

Conread position: 31-312
Cow position:
Alignm length: 302
Alignm identity: 219
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 31-381
Cow position:
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 79

Conread position: 31-461
Cow position:
Alignm length: 475
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 208

Conread position: 31-465
Cow position:
Alignm length: 476
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 377

Conread position: 34-461
Cow position:
Alignm length: 470
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 315

Conread position: 35-401
Cow position:
Alignm length: 417
Alignm identity: 298
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 52, 314

Conread position: 35-465
Cow position:
Alignm length: 445
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 261

Conread position: 36-228
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 36-264
Cow position:
Alignm length: 252
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 36-288
Cow position:
Alignm length: 276
Alignm identity: 194
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position:
Alignm length: 276
Alignm identity: 193
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position:
Alignm length: 276
Alignm identity: 198
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position:
Alignm length: 277
Alignm identity: 190
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 36-289
Cow position:
Alignm length: 278
Alignm identity: 190
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 36-289
Cow position:
Alignm length: 277
Alignm identity: 200
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 36-299
Cow position:
Alignm length: 286
Alignm identity: 202
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 231

Conread position: 36-299
Cow position:
Alignm length: 287
Alignm identity: 202
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 36-299
Cow position:
Alignm length: 287
Alignm identity: 203
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 36-299
Cow position:
Alignm length: 287
Alignm identity: 205
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 50, 32

Conread position: 36-299
Cow position:
Alignm length: 287
Alignm identity: 195
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 36-299
Cow position:
Alignm length: 282
Alignm identity: 199
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 100, 189

Conread position: 36-389
Cow position:
Alignm length: 402
Alignm identity: 279
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 68

Conread position: 36-393
Cow position:
Alignm length: 407
Alignm identity: 282
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 47, 0

Conread position: 36-453
Cow position:
Alignm length: 448
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 151

Conread position: 36-459
Cow position:
Alignm length: 469
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-459
Cow position:
Alignm length: 473
Alignm identity: 325
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 51, 416

Conread position: 36-459
Cow position:
Alignm length: 469
Alignm identity: 323
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position:
Alignm length: 473
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position:
Alignm length: 477
Alignm identity: 331
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 47, 427

Conread position: 36-460
Cow position:
Alignm length: 469
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 31

Conread position: 36-460
Cow position:
Alignm length: 470
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position:
Alignm length: 471
Alignm identity: 324
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 47, 382

Conread position: 36-460
Cow position:
Alignm length: 476
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 36

Conread position: 36-461
Cow position:
Alignm length: 475
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-492
Cow position:
Alignm length: 506
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 37-288
Cow position:
Alignm length: 281
Alignm identity: 204
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 21

Conread position: 38-299
Cow position:
Alignm length: 285
Alignm identity: 211
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 46, 0

Conread position: 38-424
Cow position:
Alignm length: 436
Alignm identity: 305
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 41-461
Cow position:
Alignm length: 466
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 68

Conread position: 43-460
Cow position:
Alignm length: 470
Alignm identity: 326
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 40, 0

Conread position: 43-460
Cow position:
Alignm length: 467
Alignm identity: 322
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 43, 399

Conread position: 72-288
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 32

Conread position: 83-459
Cow position:
Alignm length: 424
Alignm identity: 290
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 44, 0

Conread position: 125-463
Cow position:
Alignm length: 357
Alignm identity: 243
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 9, 43

Conread position: 127-459
Cow position:
Alignm length: 374
Alignm identity: 258
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 194-461
Cow position:
Alignm length: 289
Alignm identity: 212
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 16, 275

Conread position: 195-460
Cow position:
Alignm length: 290
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 209

Conread position: 195-460
Cow position:
Alignm length: 293
Alignm identity: 211
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 9, 0

Conread position: 195-461
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 209-461
Cow position:
Alignm length: 279
Alignm identity: 199
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 72, 0

Conread position: 246-453
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 32, 126

Conread position: 270-465
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 280-435
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 280-435
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 280-460
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 59, 0

Conread position: 280-489
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 96

Conread position: 288-492
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 56, 85

Conread position: 289-459
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 10, 169

Conread position: 295-459
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Show alignments to all cow chromosomes.