Cow genome map
| Conread name: | rcut32_e21.y1 |
| Conread position: | 1-435 |
| Cow position: | chr21:33983947-33983459 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 7 |
| Conread position: | 1-459 |
| Cow position: | chr21:32237669-32238177 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 9 |
| Conread position: | 7-299 |
| Cow position: | chr21:39400570-39400887 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 7-456 |
| Cow position: | chr21:470626-471124 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 325 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 71, 271 |
| Conread position: | 8-236 |
| Cow position: | chr21:14727025-14727273 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 6, 31 |
| Conread position: | 8-460 |
| Cow position: | chr21:19627373-19626871 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 344 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 6, 263 |
| Conread position: | 8-461 |
| Cow position: | chr21:39417411-39417911 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 336 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 8-469 |
| Cow position: | chr21:18837312-18836812 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 81 |
| Conread position: | 9-288 |
| Cow position: | chr21:28988636-28988924 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 78, 40 |
| Conread position: | 10-459 |
| Cow position: | chr21:27148214-27147714 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 25-464 |
| Cow position: | chr21:18851354-18850888 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 322 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 61, 78 |
| Conread position: | 26-383 |
| Cow position: | chr21:32534184-32534574 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 50 |
| Conread position: | 27-285 |
| Cow position: | chr21:14533969-14534251 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-299 |
| Cow position: | chr21:36376346-36376633 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 27-299 |
| Cow position: | chr21:42917149-42917445 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-429 |
| Cow position: | chr21:34900318-34899866 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 315 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-456 |
| Cow position: | chr21:29423419-29423893 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 414 |
| Conread position: | 27-459 |
| Cow position: | chr21:26757367-26756885 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-460 |
| Cow position: | chr21:7047823-7047346 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 329 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 56, 45 |
| Conread position: | 27-460 |
| Cow position: | chr21:26633873-26633391 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-461 |
| Cow position: | chr21:4719464-4718980 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 28-271 |
| Cow position: | chr21:18846976-18846712 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 97 |
| Conread position: | 28-289 |
| Cow position: | chr21:25986775-25987056 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 28-447 |
| Cow position: | chr21:29665613-29665179 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 103 |
| Conread position: | 28-456 |
| Cow position: | chr21:47532090-47532536 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 310 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 8, 258 |
| Conread position: | 29-152 |
| Cow position: | chr21:38026976-38027101 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 8, 88 |
| Conread position: | 29-296 |
| Cow position: | chr21:18824312-18824045 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 8, 79 |
| Conread position: | 29-299 |
| Cow position: | chr21:22463549-22463844 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 8, 225 |
| Conread position: | 29-299 |
| Cow position: | chr21:28476660-28476945 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 29-383 |
| Cow position: | chr21:31275702-31276099 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 36 |
| Conread position: | 29-465 |
| Cow position: | chr21:2905431-2904949 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 30 |
| Conread position: | 29-465 |
| Cow position: | chr21:25472558-25473016 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 238 |
| Conread position: | 29-466 |
| Cow position: | chr21:47360811-47360352 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 74 |
| Conread position: | 30-461 |
| Cow position: | chr21:13300188-13300654 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 53 |
| Conread position: | 31-288 |
| Cow position: | chr21:3046700-3046966 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 16 |
| Conread position: | 31-296 |
| Cow position: | chr21:46831205-46830914 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 31-299 |
| Cow position: | chr21:48530529-48530823 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 31-426 |
| Cow position: | chr21:9895723-9896149 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 289 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 31-460 |
| Cow position: | chr21:2293821-2293344 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 31-460 |
| Cow position: | chr21:27287340-27287814 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 326 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 120, 55 |
| Conread position: | 31-461 |
| Cow position: | chr21:28908779-28908301 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 31-461 |
| Cow position: | chr21:48262177-48262649 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 238 |
| Conread position: | 32-299 |
| Cow position: | chr21:9863572-9863296 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 10, 29 |
| Conread position: | 32-461 |
| Cow position: | chr21:4567314-4567782 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 227 |
| Conread position: | 35-291 |
| Cow position: | chr21:37298505-37298783 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 52, 229 |
| Conread position: | 35-401 |
| Cow position: | chr21:20244234-20243823 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 11 |
| Conread position: | 35-445 |
| Cow position: | chr21:48234951-48234495 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 76 |
| Conread position: | 36-239 |
| Cow position: | chr21:11405514-11405288 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-243 |
| Cow position: | chr21:39428768-39428998 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-264 |
| Cow position: | chr21:27375472-27375723 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-279 |
| Cow position: | chr21:13162800-13163042 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 137, 80 |
| Conread position: | 36-283 |
| Cow position: | chr21:8071731-8071463 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 89, 110 |
| Conread position: | 36-285 |
| Cow position: | chr21:4722023-4722275 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 77, 19 |
| Conread position: | 36-285 |
| Cow position: | chr21:25190017-25190290 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-285 |
| Cow position: | chr21:34657360-34657628 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 196 |
| Conread position: | 36-288 |
| Cow position: | chr21:1195904-1196178 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 223 |
| Conread position: | 36-288 |
| Cow position: | chr21:3782139-3782413 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-288 |
| Cow position: | chr21:16277768-16278042 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 216 |
| Conread position: | 36-288 |
| Cow position: | chr21:30565120-30565386 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 88, 51 |
| Conread position: | 36-288 |
| Cow position: | chr21:34823542-34823817 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-288 |
| Cow position: | chr21:38866246-38865971 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-288 |
| Cow position: | chr21:49655817-49655542 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-299 |
| Cow position: | chr21:30595724-30595438 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-299 |
| Cow position: | chr21:30966577-30966291 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-299 |
| Cow position: | chr21:31512904-31512619 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-299 |
| Cow position: | chr21:34684415-34684682 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 51, 70 |
| Conread position: | 36-299 |
| Cow position: | chr21:43404071-43403786 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-369 |
| Cow position: | chr21:44219045-44219425 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 132 |
| Conread position: | 36-435 |
| Cow position: | chr21:2514217-2514661 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 311 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 47, 232 |
| Conread position: | 36-435 |
| Cow position: | chr21:32773301-32773749 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-455 |
| Cow position: | chr21:24887016-24887476 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 315 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 95, 38 |
| Conread position: | 36-458 |
| Cow position: | chr21:28259036-28259497 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 39 |
| Conread position: | 36-458 |
| Cow position: | chr21:36506472-36506005 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 325 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 47, 415 |
| Conread position: | 36-459 |
| Cow position: | chr21:5642470-5642000 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 328 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 36-459 |
| Cow position: | chr21:11144484-11144012 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 326 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-459 |
| Cow position: | chr21:23329977-23329505 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-459 |
| Cow position: | chr21:25598039-25598502 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-459 |
| Cow position: | chr21:30297845-30298317 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-459 |
| Cow position: | chr21:36534842-36534376 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 393 |
| Conread position: | 36-459 |
| Cow position: | chr21:39470398-39469927 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 375 |
| Conread position: | 36-459 |
| Cow position: | chr21:47648706-47649181 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 333 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-460 |
| Cow position: | chr21:2878471-2878003 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 328 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 50, 19 |
| Conread position: | 36-460 |
| Cow position: | chr21:4035896-4035453 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 67 |
| Conread position: | 36-460 |
| Cow position: | chr21:4898598-4898134 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-460 |
| Cow position: | chr21:5020512-5020977 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 229 |
| Conread position: | 36-460 |
| Cow position: | chr21:10853631-10854095 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 322 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 50, 343 |
| Conread position: | 36-460 |
| Cow position: | chr21:11509307-11509778 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-460 |
| Cow position: | chr21:19351495-19351022 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-460 |
| Cow position: | chr21:26400398-26399947 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 303 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 50, 25 |
| Conread position: | 36-460 |
| Cow position: | chr21:26874958-26875430 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 326 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 47, 121 |
| Conread position: | 36-460 |
| Cow position: | chr21:27620134-27619681 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 133 |
| Conread position: | 36-460 |
| Cow position: | chr21:32396658-32396212 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 91, 212 |
| Conread position: | 36-460 |
| Cow position: | chr21:33256922-33257393 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 326 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 47, 462 |
| Conread position: | 36-460 |
| Cow position: | chr21:33317000-33316527 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-460 |
| Cow position: | chr21:33965353-33964893 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 169 |
| Conread position: | 36-460 |
| Cow position: | chr21:37923553-37924015 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 78 |
| Conread position: | 36-461 |
| Cow position: | chr21:1766147-1765696 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 98 |
| Conread position: | 36-461 |
| Cow position: | chr21:12153189-12153652 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 315 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 36-461 |
| Cow position: | chr21:23341017-23341491 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-461 |
| Cow position: | chr21:41796355-41795885 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-461 |
| Cow position: | chr21:47168326-47168801 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 328 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-461 |
| Cow position: | chr21:47977633-47978107 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 328 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 36-461 |
| Cow position: | chr21:48273831-48273358 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 37-279 |
| Cow position: | chr21:30627712-30627451 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 37-448 |
| Cow position: | chr21:4079391-4079840 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 310 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 46, 23 |
| Conread position: | 37-460 |
| Cow position: | chr21:18285173-18285640 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 329 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 46, 229 |
| Conread position: | 37-460 |
| Cow position: | chr21:34255211-34254770 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 46, 74 |
| Conread position: | 38-299 |
| Cow position: | chr21:81115-81390 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 39-425 |
| Cow position: | chr21:18819270-18818844 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 41-296 |
| Cow position: | chr21:44862220-44861948 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 103, 67 |
| Conread position: | 41-459 |
| Cow position: | chr21:38450617-38450174 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 321 |
| Conread position: | 41-465 |
| Cow position: | chr21:12802735-12802269 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 323 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 43, 13 |
| Conread position: | 43-460 |
| Cow position: | chr21:13302579-13303034 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 125 |
| Conread position: | 43-461 |
| Cow position: | chr21:4586306-4585836 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 46-299 |
| Cow position: | chr21:39059943-39059678 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 37, 160 |
| Conread position: | 46-459 |
| Cow position: | chr21:13735785-13735324 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 316 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 46-459 |
| Cow position: | chr21:33710124-33709662 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 321 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 48-460 |
| Cow position: | chr21:15585329-15584891 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 302 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 39, 112 |
| Conread position: | 54-460 |
| Cow position: | chr21:16890454-16890005 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 55-459 |
| Cow position: | chr21:31949801-31950251 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 311 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 33, 367 |
| Conread position: | 58-504 |
| Cow position: | chr21:48195841-48196320 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 344 |
| Conread position: | 59-276 |
| Cow position: | chr21:1057851-1058091 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 59-459 |
| Cow position: | chr21:36892843-36892394 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 64-299 |
| Cow position: | chr21:4791509-4791763 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 188 |
| Conread position: | 69-452 |
| Cow position: | chr21:5596191-5596608 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 82, 349 |
| Conread position: | 69-460 |
| Cow position: | chr21:24297664-24297263 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 277 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 47, 158 |
| Conread position: | 83-285 |
| Cow position: | chr21:28811168-28810951 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 61, 194 |
| Conread position: | 83-460 |
| Cow position: | chr21:26628183-26628606 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 295 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 86-465 |
| Cow position: | chr21:4541760-4541343 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 299 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 41, 83 |
| Conread position: | 121-460 |
| Cow position: | chr21:13111659-13111288 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 263 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 126-459 |
| Cow position: | chr21:18573987-18574352 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 259 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 127-435 |
| Cow position: | chr21:30850327-30850676 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 127-461 |
| Cow position: | chr21:16575982-16575607 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 130-466 |
| Cow position: | chr21:44762212-44761837 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 29, 14 |
| Conread position: | 138-461 |
| Cow position: | chr21:7597795-7597431 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 179-460 |
| Cow position: | chr21:28028164-28028471 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 180-451 |
| Cow position: | chr21:29015933-29015640 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 192-435 |
| Cow position: | chr21:28625264-28625522 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 204 |
| Conread position: | 192-460 |
| Cow position: | chr21:17371014-17370721 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 195-459 |
| Cow position: | chr21:25479818-25480109 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 195-459 |
| Cow position: | chr21:34181212-34181503 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 195-461 |
| Cow position: | chr21:26855146-26854853 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 201-460 |
| Cow position: | chr21:42443380-42443098 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 209-520 |
| Cow position: | chr21:11663682-11663345 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 256-465 |
| Cow position: | chr21:39508335-39508126 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 80, 11 |
| Conread position: | 259-466 |
| Cow position: | chr21:31252631-31252843 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 77, 22 |
| Conread position: | 265-461 |
| Cow position: | chr21:28476934-28477135 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 68, 33 |
| Conread position: | 280-452 |
| Cow position: | chr21:9011840-9011664 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 280-459 |
| Cow position: | chr21:7524769-7524955 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 280-459 |
| Cow position: | chr21:11760313-11760134 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 53, 81 |
| Conread position: | 280-460 |
| Cow position: | chr21:7666737-7666547 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 282-459 |
| Cow position: | chr21:33770331-33770515 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 291-446 |
| Cow position: | chr21:14727406-14727568 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 291-461 |
| Cow position: | chr21:81407-81583 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 166 |
| Conread position: | 291-461 |
| Cow position: | chr21:29855007-29855184 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 291-461 |
| Cow position: | chr21:39429283-39429459 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 151 |
| Conread position: | 292-461 |
| Cow position: | chr21:28810917-28810744 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 292-465 |
| Cow position: | chr21:32560289-32560124 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 46 |
| Conread position: | 295-459 |
| Cow position: | chr21:1752056-1752227 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-459 |
| Cow position: | chr21:11292373-11292544 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-459 |
| Cow position: | chr21:21103385-21103556 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-459 |
| Cow position: | chr21:25738533-25738362 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-459 |
| Cow position: | chr21:30655306-30655477 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-460 |
| Cow position: | chr21:3923578-3923750 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-461 |
| Cow position: | chr21:36854580-36854753 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-461 |
| Cow position: | chr21:40478928-40479101 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.