Cow genome map

Conread name: rcut32_e21.y1

Conread position: 3-291
Cow position:
Alignm length: 313
Alignm identity: 225
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 11, 0

Conread position: 5-465
Cow position:
Alignm length: 498
Alignm identity: 327
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 59, 65

Conread position: 7-382
Cow position:
Alignm length: 426
Alignm identity: 288
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 8-297
Cow position:
Alignm length: 314
Alignm identity: 217
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 6, 99

Conread position: 8-435
Cow position:
Alignm length: 481
Alignm identity: 332
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 6, 0

Conread position: 10-299
Cow position:
Alignm length: 305
Alignm identity: 198
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 10-459
Cow position:
Alignm length: 468
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 12

Conread position: 15-299
Cow position:
Alignm length: 308
Alignm identity: 207
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 62

Conread position: 26-196
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 26-399
Cow position:
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 26-459
Cow position:
Alignm length: 480
Alignm identity: 328
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 11, 0

Conread position: 26-459
Cow position:
Alignm length: 474
Alignm identity: 313
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 27-288
Cow position:
Alignm length: 286
Alignm identity: 199
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 27-320
Cow position:
Alignm length: 313
Alignm identity: 189
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 60, 144

Conread position: 27-458
Cow position:
Alignm length: 481
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-459
Cow position:
Alignm length: 483
Alignm identity: 328
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 10, 0

Conread position: 27-459
Cow position:
Alignm length: 483
Alignm identity: 333
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 10, 242

Conread position: 27-459
Cow position:
Alignm length: 483
Alignm identity: 328
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 10, 0

Conread position: 27-459
Cow position:
Alignm length: 480
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 87

Conread position: 27-459
Cow position:
Alignm length: 483
Alignm identity: 332
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 10, 92

Conread position: 27-459
Cow position:
Alignm length: 483
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-460
Cow position:
Alignm length: 463
Alignm identity: 310
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 10, 222

Conread position: 27-460
Cow position:
Alignm length: 480
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 28

Conread position: 29-292
Cow position:
Alignm length: 286
Alignm identity: 208
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 8, 59

Conread position: 29-434
Cow position:
Alignm length: 446
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 34

Conread position: 29-465
Cow position:
Alignm length: 483
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 373

Conread position: 30-451
Cow position:
Alignm length: 448
Alignm identity: 302
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 156, 89

Conread position: 31-288
Cow position:
Alignm length: 272
Alignm identity: 187
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 128, 51

Conread position: 31-299
Cow position:
Alignm length: 284
Alignm identity: 200
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 75

Conread position: 31-300
Cow position:
Alignm length: 287
Alignm identity: 207
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 56, 0

Conread position: 31-357
Cow position:
Alignm length: 362
Alignm identity: 247
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 52, 65

Conread position: 31-459
Cow position:
Alignm length: 472
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 91

Conread position: 34-288
Cow position:
Alignm length: 277
Alignm identity: 196
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 35-296
Cow position:
Alignm length: 282
Alignm identity: 210
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 52, 9

Conread position: 35-374
Cow position:
Alignm length: 385
Alignm identity: 268
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 48, 8

Conread position: 36-231
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 48, 69

Conread position: 36-270
Cow position:
Alignm length: 258
Alignm identity: 184
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 36-273
Cow position:
Alignm length: 261
Alignm identity: 184
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 36-288
Cow position:
Alignm length: 276
Alignm identity: 198
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 36-288
Cow position:
Alignm length: 275
Alignm identity: 193
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position:
Alignm length: 270
Alignm identity: 190
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 103, 131

Conread position: 36-290
Cow position:
Alignm length: 257
Alignm identity: 186
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 52, 115

Conread position: 36-299
Cow position:
Alignm length: 287
Alignm identity: 205
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 36-299
Cow position:
Alignm length: 282
Alignm identity: 192
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 36-299
Cow position:
Alignm length: 286
Alignm identity: 200
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 36-299
Cow position:
Alignm length: 277
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 172

Conread position: 36-299
Cow position:
Alignm length: 287
Alignm identity: 198
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 36-299
Cow position:
Alignm length: 289
Alignm identity: 203
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 36-299
Cow position:
Alignm length: 284
Alignm identity: 192
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 36-301
Cow position:
Alignm length: 289
Alignm identity: 204
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 36-312
Cow position:
Alignm length: 298
Alignm identity: 211
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 50, 283

Conread position: 36-395
Cow position:
Alignm length: 394
Alignm identity: 281
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 48, 256

Conread position: 36-401
Cow position:
Alignm length: 415
Alignm identity: 291
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 51, 0

Conread position: 36-401
Cow position:
Alignm length: 412
Alignm identity: 286
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 51, 82

Conread position: 36-412
Cow position:
Alignm length: 416
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 205

Conread position: 36-451
Cow position:
Alignm length: 435
Alignm identity: 289
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 58

Conread position: 36-451
Cow position:
Alignm length: 450
Alignm identity: 312
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 90, 204

Conread position: 36-456
Cow position:
Alignm length: 465
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 365

Conread position: 36-456
Cow position:
Alignm length: 470
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 36-459
Cow position:
Alignm length: 469
Alignm identity: 320
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 51, 22

Conread position: 36-459
Cow position:
Alignm length: 474
Alignm identity: 321
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position:
Alignm length: 473
Alignm identity: 321
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 47, 0

Conread position: 36-459
Cow position:
Alignm length: 486
Alignm identity: 329
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 51, 216

Conread position: 36-459
Cow position:
Alignm length: 473
Alignm identity: 319
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 47, 247

Conread position: 36-459
Cow position:
Alignm length: 474
Alignm identity: 318
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 48, 36

Conread position: 36-459
Cow position:
Alignm length: 472
Alignm identity: 324
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position:
Alignm length: 474
Alignm identity: 320
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position:
Alignm length: 473
Alignm identity: 327
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 51, 118

Conread position: 36-459
Cow position:
Alignm length: 471
Alignm identity: 319
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 91, 26

Conread position: 36-459
Cow position:
Alignm length: 473
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position:
Alignm length: 473
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position:
Alignm length: 473
Alignm identity: 323
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 51, 209

Conread position: 36-460
Cow position:
Alignm length: 470
Alignm identity: 321
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 50, 73

Conread position: 36-460
Cow position:
Alignm length: 474
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position:
Alignm length: 477
Alignm identity: 319
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 47, 450

Conread position: 36-460
Cow position:
Alignm length: 474
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-460
Cow position:
Alignm length: 474
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position:
Alignm length: 474
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 330

Conread position: 36-460
Cow position:
Alignm length: 475
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 36-460
Cow position:
Alignm length: 475
Alignm identity: 332
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 34, 376

Conread position: 36-460
Cow position:
Alignm length: 473
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 64

Conread position: 36-460
Cow position:
Alignm length: 460
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 64

Conread position: 36-461
Cow position:
Alignm length: 477
Alignm identity: 330
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 51, 22

Conread position: 36-461
Cow position:
Alignm length: 475
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-461
Cow position:
Alignm length: 475
Alignm identity: 319
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 50, 385

Conread position: 37-290
Cow position:
Alignm length: 276
Alignm identity: 197
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 37-299
Cow position:
Alignm length: 286
Alignm identity: 202
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 37-460
Cow position:
Alignm length: 473
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 415

Conread position: 38-461
Cow position:
Alignm length: 472
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 39-461
Cow position:
Alignm length: 464
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 374

Conread position: 42-461
Cow position:
Alignm length: 470
Alignm identity: 321
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 43, 232

Conread position: 43-459
Cow position:
Alignm length: 460
Alignm identity: 309
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 44, 358

Conread position: 43-460
Cow position:
Alignm length: 445
Alignm identity: 309
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 136, 40

Conread position: 46-451
Cow position:
Alignm length: 451
Alignm identity: 308
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 41, 64

Conread position: 50-299
Cow position:
Alignm length: 273
Alignm identity: 191
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 50-460
Cow position:
Alignm length: 457
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 50-460
Cow position:
Alignm length: 460
Alignm identity: 313
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 36, 0

Conread position: 53-465
Cow position:
Alignm length: 463
Alignm identity: 312
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 384

Conread position: 59-460
Cow position:
Alignm length: 449
Alignm identity: 311
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 68, 0

Conread position: 60-459
Cow position:
Alignm length: 449
Alignm identity: 308
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 0

Conread position: 93-296
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 125-424
Cow position:
Alignm length: 323
Alignm identity: 222
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 41, 137

Conread position: 127-460
Cow position:
Alignm length: 372
Alignm identity: 254
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 127-460
Cow position:
Alignm length: 372
Alignm identity: 254
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 130-459
Cow position:
Alignm length: 368
Alignm identity: 249
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 258

Conread position: 130-461
Cow position:
Alignm length: 373
Alignm identity: 262
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 35, 0

Conread position: 136-460
Cow position:
Alignm length: 366
Alignm identity: 255
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 178-460
Cow position:
Alignm length: 305
Alignm identity: 219
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 94, 13

Conread position: 192-460
Cow position:
Alignm length: 296
Alignm identity: 211
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 18, 0

Conread position: 195-461
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 250-461
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 37, 125

Conread position: 260-469
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 80, 9

Conread position: 265-418
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 157

Conread position: 279-461
Cow position:
Alignm length: 193
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 280-471
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 282-459
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 282-459
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 113

Conread position: 286-461
Cow position:
Alignm length: 183
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 287-460
Cow position:
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 287-461
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 54, 14

Conread position: 291-460
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 295-459
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 295-459
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 295-459
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 295-459
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 295-459
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 295-460
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 295-461
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 133

Conread position: 295-465
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 295-465
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 301-460
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 0

Show alignments to all cow chromosomes.