Cow genome map

Conread name: rcut32_e21.y1

Conread position: 3-461
Cow position: chr25:4522866-4522369 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 12

Conread position: 4-460
Cow position: chr25:7799964-7800460 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 350
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 10, 20

Conread position: 7-459
Cow position: chr25:29525922-29525420 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 344
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 21, 432

Conread position: 8-288
Cow position: chr25:10013117-10012811 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 8-460
Cow position: chr25:19337381-19336878 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 8-460
Cow position: chr25:39386885-39386386 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 445

Conread position: 15-460
Cow position: chr25:17993188-17992698 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 120

Conread position: 26-299
Cow position: chr25:8655255-8655553 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 205
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 27-285
Cow position: chr25:2515974-2516246 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 10, 0

Conread position: 27-299
Cow position: chr25:26781116-26780824 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 49

Conread position: 27-392
Cow position: chr25:26705916-26705501 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 292
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 10, 0

Conread position: 27-432
Cow position: chr25:13430143-13429697 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 308
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 10, 29

Conread position: 27-459
Cow position: chr25:32610454-32609972 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 331
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 0

Conread position: 27-460
Cow position: chr25:11665642-11666111 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 324
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 11, 103

Conread position: 29-161
Cow position: chr25:9958083-9957951 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 8, 34

Conread position: 29-288
Cow position: chr25:19367727-19367448 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 8, 243

Conread position: 29-460
Cow position: chr25:18190405-18189930 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 31-288
Cow position: chr25:25826419-25826701 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 31-299
Cow position: chr25:18129199-18129462 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 77

Conread position: 31-456
Cow position: chr25:17554288-17553825 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 319
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 47, 219

Conread position: 31-458
Cow position: chr25:26353813-26353341 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 330
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 55, 216

Conread position: 35-445
Cow position: chr25:9395385-9395846 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 80

Conread position: 36-239
Cow position: chr25:35372637-35372411 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 36-265
Cow position: chr25:20633737-20633988 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 36-285
Cow position: chr25:18265173-18265436 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 102, 0

Conread position: 36-288
Cow position: chr25:6955044-6955318 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 241

Conread position: 36-288
Cow position: chr25:7223456-7223181 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position: chr25:11124742-11125017 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 36-288
Cow position: chr25:27019261-27018987 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 36-288
Cow position: chr25:31073620-31073345 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position: chr25:32577686-32577411 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 47, 82

Conread position: 36-288
Cow position: chr25:34343930-34343657 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 50, 32

Conread position: 36-288
Cow position: chr25:35445927-35446195 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 50, 250

Conread position: 36-299
Cow position: chr25:17586044-17585760 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 36-299
Cow position: chr25:18330800-18330513 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 36-299
Cow position: chr25:19923503-19923783 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 47, 82

Conread position: 36-299
Cow position: chr25:22151081-22151367 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 36-299
Cow position: chr25:24655193-24654912 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 91, 49

Conread position: 36-299
Cow position: chr25:29358036-29357750 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 36-299
Cow position: chr25:34503246-34502960 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 231

Conread position: 36-383
Cow position: chr25:23913647-23914038 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 71, 55

Conread position: 36-435
Cow position: chr25:17904616-17905064 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-435
Cow position: chr25:28275690-28275247 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 50

Conread position: 36-435
Cow position: chr25:35589054-35589501 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 316
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 47, 107

Conread position: 36-452
Cow position: chr25:24228359-24227907 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 307
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 103, 226

Conread position: 36-459
Cow position: chr25:14756433-14755967 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 325
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 69

Conread position: 36-459
Cow position: chr25:19139596-19139124 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position: chr25:34509203-34508734 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 316
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position: chr25:35553646-35554116 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 26

Conread position: 36-459
Cow position: chr25:35755267-35754799 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 231

Conread position: 36-459
Cow position: chr25:36350716-36351186 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 80

Conread position: 36-460
Cow position: chr25:11043597-11044064 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 325
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 91, 221

Conread position: 36-460
Cow position: chr25:13786950-13787413 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 36-460
Cow position: chr25:26282001-26282473 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 36-460
Cow position: chr25:26922817-26923292 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 324
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 66

Conread position: 36-460
Cow position: chr25:27231335-27231796 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 228

Conread position: 36-460
Cow position: chr25:28862848-28863318 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 36-460
Cow position: chr25:29802769-29802296 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 320
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 51, 0

Conread position: 36-460
Cow position: chr25:33838359-33838822 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 311
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chr25:34164585-34164113 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-460
Cow position: chr25:35567907-35567441 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 67

Conread position: 36-460
Cow position: chr25:41098215-41097748 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 326
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 51, 126

Conread position: 36-460
Cow position: chr25:41356821-41356354 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 403

Conread position: 36-466
Cow position: chr25:11955807-11956283 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 237

Conread position: 37-460
Cow position: chr25:23393850-23394311 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 37-460
Cow position: chr25:34673609-34673133 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 325
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 39-147
Cow position: chr25:14790186-14790292 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 43-465
Cow position: chr25:17657603-17658066 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 46-460
Cow position: chr25:13960053-13960508 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 46-460
Cow position: chr25:18474193-18474640 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 57

Conread position: 46-460
Cow position: chr25:24205144-24204684 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 310
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 40, 244

Conread position: 51-273
Cow position: chr25:449807-449570 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 167

Conread position: 62-461
Cow position: chr25:9054672-9055109 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 127-458
Cow position: chr25:3688210-3688582 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 254
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 127-459
Cow position: chr25:15429605-15429232 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 255
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 127-460
Cow position: chr25:14954956-14954598 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 36

Conread position: 127-460
Cow position: chr25:25509964-25510338 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 266
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 28, 0

Conread position: 127-461
Cow position: chr25:27145500-27145872 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 130-459
Cow position: chr25:17808700-17808331 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 254
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 131-461
Cow position: chr25:8934875-8935246 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 178-459
Cow position: chr25:22111447-22111741 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 71, 13

Conread position: 184-460
Cow position: chr25:18324209-18323910 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 94, 22

Conread position: 194-460
Cow position: chr25:11896338-11896046 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 10, 283

Conread position: 195-435
Cow position: chr25:21966546-21966813 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 195-459
Cow position: chr25:17994366-17994075 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 195-459
Cow position: chr25:27076218-27076505 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 15, 249

Conread position: 195-460
Cow position: chr25:9595473-9595762 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 11, 0

Conread position: 213-399
Cow position: chr25:41346174-41345977 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 229-460
Cow position: chr25:25755248-25755010 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 107, 0

Conread position: 264-441
Cow position: chr25:21570179-21569996 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 73, 94

Conread position: 269-465
Cow position: chr25:24670114-24669914 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 27, 141

Conread position: 280-434
Cow position: chr25:16401629-16401468 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 280-536
Cow position: chr25:2516267-2516519 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 16, 58

Conread position: 282-460
Cow position: chr25:34502422-34502238 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 16

Conread position: 295-459
Cow position: chr25:4858221-4858050 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 295-459
Cow position: chr25:12318547-12318376 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 295-459
Cow position: chr25:17658851-17659013 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 61, 23

Conread position: 295-459
Cow position: chr25:34121818-34121646 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 295-461
Cow position: chr25:13956113-13955940 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 295-461
Cow position: chr25:14554944-14555117 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 295-471
Cow position: chr25:11584787-11584968 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 42, 107

Conread position: 298-461
Cow position: chr25:10158021-10158191 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 301-459
Cow position: chr25:26755750-26755915 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 301-460
Cow position: chr25:13967678-13967513 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 301-461
Cow position: chr25:15005483-15005651 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Show alignments to all cow chromosomes.