Cow genome map
| Conread name: | rcut32_e21.y1 |
| Conread position: | 2-459 |
| Cow position: | chr28:10870285-10870794 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-299 |
| Cow position: | chr28:17030896-17030579 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 25, 7 |
| Conread position: | 3-445 |
| Cow position: | chr28:16543501-16543042 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 308 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 25, 94 |
| Conread position: | 7-462 |
| Cow position: | chr28:18140510-18140024 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 323 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 21, 460 |
| Conread position: | 7-463 |
| Cow position: | chr28:14233961-14234448 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 8-389 |
| Cow position: | chr28:10162431-10162854 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 15 |
| Conread position: | 25-461 |
| Cow position: | chr28:13606654-13607152 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 345 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 62, 92 |
| Conread position: | 26-460 |
| Cow position: | chr28:5637272-5637756 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 26-460 |
| Cow position: | chr28:34730954-34731437 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 329 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 14, 220 |
| Conread position: | 26-463 |
| Cow position: | chr28:4214114-4214600 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 27-258 |
| Cow position: | chr28:6472216-6471962 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 10, 128 |
| Conread position: | 27-390 |
| Cow position: | chr28:6776780-6776368 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 288 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-459 |
| Cow position: | chr28:9182092-9182574 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-460 |
| Cow position: | chr28:23310113-23309630 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 334 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-460 |
| Cow position: | chr28:24886083-24886565 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 373 |
| Conread position: | 27-460 |
| Cow position: | chr28:25828618-25829101 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 28-460 |
| Cow position: | chr28:8786540-8787012 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 204 |
| Conread position: | 29-147 |
| Cow position: | chr28:8971302-8971422 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 6, 100 |
| Conread position: | 29-296 |
| Cow position: | chr28:3001631-3001343 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 8, 87 |
| Conread position: | 29-461 |
| Cow position: | chr28:1837018-1837455 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 30 |
| Conread position: | 29-465 |
| Cow position: | chr28:5804494-5804974 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 66 |
| Conread position: | 29-465 |
| Cow position: | chr28:24997687-24997200 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 81 |
| Conread position: | 31-285 |
| Cow position: | chr28:15715200-15715476 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 31-297 |
| Cow position: | chr28:14229739-14229468 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 63 |
| Conread position: | 31-299 |
| Cow position: | chr28:26923401-26923110 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 31-382 |
| Cow position: | chr28:25849789-25850186 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 33-236 |
| Cow position: | chr28:32730783-32730580 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 165, 54 |
| Conread position: | 34-459 |
| Cow position: | chr28:7888853-7888380 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 293 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 26, 7 |
| Conread position: | 35-460 |
| Cow position: | chr28:12406931-12406471 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 36-276 |
| Cow position: | chr28:5312207-5312470 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-285 |
| Cow position: | chr28:1025100-1024828 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 47, 74 |
| Conread position: | 36-285 |
| Cow position: | chr28:7005260-7005533 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-288 |
| Cow position: | chr28:1198428-1198703 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-288 |
| Cow position: | chr28:7336216-7336491 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 36-288 |
| Cow position: | chr28:10194372-10194097 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-288 |
| Cow position: | chr28:13323366-13323641 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-288 |
| Cow position: | chr28:15917292-15917019 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 36-288 |
| Cow position: | chr28:17391666-17391941 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-288 |
| Cow position: | chr28:18516913-18516637 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 36-288 |
| Cow position: | chr28:21768060-21767796 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 64 |
| Conread position: | 36-288 |
| Cow position: | chr28:21896515-21896789 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 246 |
| Conread position: | 36-288 |
| Cow position: | chr28:22254965-22254694 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 61 |
| Conread position: | 36-288 |
| Cow position: | chr28:26419768-26419493 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-288 |
| Cow position: | chr28:28357551-28357276 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-288 |
| Cow position: | chr28:28471258-28471527 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 235 |
| Conread position: | 36-288 |
| Cow position: | chr28:29036419-29036144 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-288 |
| Cow position: | chr28:30960780-30961046 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 102, 83 |
| Conread position: | 36-288 |
| Cow position: | chr28:33255554-33255828 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 50, 232 |
| Conread position: | 36-296 |
| Cow position: | chr28:31322427-31322702 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 51, 135 |
| Conread position: | 36-299 |
| Cow position: | chr28:958093-958377 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-299 |
| Cow position: | chr28:1944062-1943777 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 36-299 |
| Cow position: | chr28:1956602-1956882 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 36-299 |
| Cow position: | chr28:2280670-2280402 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 51, 155 |
| Conread position: | 36-299 |
| Cow position: | chr28:3188783-3188498 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-299 |
| Cow position: | chr28:5772651-5772927 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 24 |
| Conread position: | 36-299 |
| Cow position: | chr28:5940719-5941005 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-299 |
| Cow position: | chr28:12429439-12429723 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 52, 89 |
| Conread position: | 36-299 |
| Cow position: | chr28:20935179-20934893 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-299 |
| Cow position: | chr28:20967436-20967150 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 36-371 |
| Cow position: | chr28:32786194-32785823 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 258 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 50, 223 |
| Conread position: | 36-372 |
| Cow position: | chr28:15600504-15600157 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 123, 98 |
| Conread position: | 36-387 |
| Cow position: | chr28:3627246-3627646 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-401 |
| Cow position: | chr28:15054389-15054803 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 293 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-401 |
| Cow position: | chr28:34677964-34677567 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 280 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 48, 238 |
| Conread position: | 36-435 |
| Cow position: | chr28:5211355-5211802 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 311 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-435 |
| Cow position: | chr28:7059463-7059911 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 314 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-451 |
| Cow position: | chr28:23543859-23544320 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 322 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 98, 47 |
| Conread position: | 36-456 |
| Cow position: | chr28:13463196-13463665 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-458 |
| Cow position: | chr28:7907312-7906843 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 12 |
| Conread position: | 36-459 |
| Cow position: | chr28:444641-445104 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-459 |
| Cow position: | chr28:482475-482005 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 321 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-459 |
| Cow position: | chr28:6478452-6478923 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 58 |
| Conread position: | 36-459 |
| Cow position: | chr28:6535565-6535092 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 325 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 36-459 |
| Cow position: | chr28:9288160-9287688 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-459 |
| Cow position: | chr28:28934730-28934258 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 327 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-459 |
| Cow position: | chr28:29223052-29222582 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 462 |
| Conread position: | 36-460 |
| Cow position: | chr28:5111488-5111018 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 327 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 50, 36 |
| Conread position: | 36-460 |
| Cow position: | chr28:5336572-5336099 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 328 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-460 |
| Cow position: | chr28:5748473-5748000 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 326 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-460 |
| Cow position: | chr28:6047029-6047497 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 144 |
| Conread position: | 36-460 |
| Cow position: | chr28:10473200-10473658 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 50 |
| Conread position: | 36-460 |
| Cow position: | chr28:16181601-16182054 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 274 |
| Conread position: | 36-460 |
| Cow position: | chr28:29823419-29823891 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-461 |
| Cow position: | chr28:2644948-2645420 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 325 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 51, 107 |
| Conread position: | 36-461 |
| Cow position: | chr28:23620196-23620638 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 74 |
| Conread position: | 36-461 |
| Cow position: | chr28:23675047-23675511 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 318 |
| Conread position: | 36-461 |
| Cow position: | chr28:24992720-24993194 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-461 |
| Cow position: | chr28:32588932-32589406 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-465 |
| Cow position: | chr28:1384222-1383741 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 334 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 36-465 |
| Cow position: | chr28:13725166-13725622 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 237 |
| Conread position: | 36-471 |
| Cow position: | chr28:3745196-3745666 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 219 |
| Conread position: | 37-299 |
| Cow position: | chr28:12166265-12165993 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 94, 215 |
| Conread position: | 37-299 |
| Cow position: | chr28:15687532-15687810 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 100, 39 |
| Conread position: | 37-451 |
| Cow position: | chr28:29807205-29806748 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 326 |
| Conread position: | 37-465 |
| Cow position: | chr28:25070081-25070558 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 325 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 46, 69 |
| Conread position: | 38-460 |
| Cow position: | chr28:10303073-10303543 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 43-299 |
| Cow position: | chr28:21362752-21363027 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 44-461 |
| Cow position: | chr28:10280089-10280536 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 31 |
| Conread position: | 46-279 |
| Cow position: | chr28:25408879-25409129 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 37, 111 |
| Conread position: | 53-465 |
| Cow position: | chr28:16212079-16211636 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 34, 297 |
| Conread position: | 75-299 |
| Cow position: | chr28:7981687-7981444 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 189 |
| Conread position: | 75-459 |
| Cow position: | chr28:6319873-6319446 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 37, 161 |
| Conread position: | 83-461 |
| Cow position: | chr28:9710872-9710447 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 296 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 83-461 |
| Cow position: | chr28:12701149-12701574 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 292 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 85-299 |
| Cow position: | chr28:12081636-12081411 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 50 |
| Conread position: | 127-461 |
| Cow position: | chr28:30249458-30249833 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 130-383 |
| Cow position: | chr28:4069289-4069575 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 135 |
| Conread position: | 130-461 |
| Cow position: | chr28:25762159-25762494 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 141-461 |
| Cow position: | chr28:25726476-25726833 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 42, 347 |
| Conread position: | 189-460 |
| Cow position: | chr28:28116021-28116316 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 17, 50 |
| Conread position: | 195-392 |
| Cow position: | chr28:16386759-16386972 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 195-459 |
| Cow position: | chr28:331862-332153 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 195-459 |
| Cow position: | chr28:19185637-19185928 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 195-459 |
| Cow position: | chr28:34655497-34655789 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 195-460 |
| Cow position: | chr28:24603340-24603631 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 10, 267 |
| Conread position: | 195-460 |
| Cow position: | chr28:30532580-30532291 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 9, 193 |
| Conread position: | 209-460 |
| Cow position: | chr28:34581924-34581647 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 230-465 |
| Cow position: | chr28:29726368-29726626 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 231-460 |
| Cow position: | chr28:22279985-22279733 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 198 |
| Conread position: | 260-451 |
| Cow position: | chr28:13242805-13242611 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 73, 9 |
| Conread position: | 260-458 |
| Cow position: | chr28:1536812-1537011 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 80, 16 |
| Conread position: | 278-457 |
| Cow position: | chr28:19834615-19834801 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 280-461 |
| Cow position: | chr28:17314914-17315102 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 286-461 |
| Cow position: | chr28:23794051-23793869 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 290-458 |
| Cow position: | chr28:15712536-15712711 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 291-460 |
| Cow position: | chr28:3012656-3012477 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 291-460 |
| Cow position: | chr28:15966064-15965888 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 291-460 |
| Cow position: | chr28:18559446-18559270 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 291-465 |
| Cow position: | chr28:615511-615692 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 295-437 |
| Cow position: | chr28:32717697-32717555 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 295-459 |
| Cow position: | chr28:2616290-2616119 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-459 |
| Cow position: | chr28:5311816-5311645 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-459 |
| Cow position: | chr28:10193501-10193330 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-459 |
| Cow position: | chr28:12117706-12117535 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-459 |
| Cow position: | chr28:15047742-15047913 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-459 |
| Cow position: | chr28:22582315-22582486 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-459 |
| Cow position: | chr28:27938354-27938525 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-460 |
| Cow position: | chr28:21767605-21767433 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-461 |
| Cow position: | chr28:23478092-23477919 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 298-460 |
| Cow position: | chr28:6484957-6484788 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 301-459 |
| Cow position: | chr28:12968668-12968503 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
Show alignments to all cow chromosomes.