Cow genome map
| Conread name: | rcut32_e21.y1 |
| Conread position: | 1-285 |
| Cow position: | chr3:40048969-40049278 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 7 |
| Conread position: | 3-296 |
| Cow position: | chr3:61677621-61677935 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 16, 7 |
| Conread position: | 3-460 |
| Cow position: | chr3:13248939-13248430 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 7-288 |
| Cow position: | chr3:42977503-42977200 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 21, 234 |
| Conread position: | 7-460 |
| Cow position: | chr3:83767334-83767835 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 342 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 31, 49 |
| Conread position: | 7-461 |
| Cow position: | chr3:26919811-26920319 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 447 |
| Conread position: | 7-464 |
| Cow position: | chr3:26566861-26567369 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 8-288 |
| Cow position: | chr3:50204651-50204957 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 8-459 |
| Cow position: | chr3:21593370-21593871 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 346 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 6, 139 |
| Conread position: | 8-460 |
| Cow position: | chr3:6785403-6785904 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 8-460 |
| Cow position: | chr3:49605355-49604856 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 277 |
| Conread position: | 8-461 |
| Cow position: | chr3:37627977-37628474 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 23-383 |
| Cow position: | chr3:31050899-31050511 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 282 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 64, 27 |
| Conread position: | 24-299 |
| Cow position: | chr3:6896936-6897231 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 24-459 |
| Cow position: | chr3:21779673-21779188 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 25-364 |
| Cow position: | chr3:77547924-77548296 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 12, 111 |
| Conread position: | 25-457 |
| Cow position: | chr3:17937895-17937430 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 33 |
| Conread position: | 26-399 |
| Cow position: | chr3:13723605-13723182 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 26-419 |
| Cow position: | chr3:12673267-12672838 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 81 |
| Conread position: | 26-435 |
| Cow position: | chr3:40337039-40336580 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 320 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 26-451 |
| Cow position: | chr3:12750008-12750478 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 321 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 60, 17 |
| Conread position: | 26-459 |
| Cow position: | chr3:35918671-35919149 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 325 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 26-460 |
| Cow position: | chr3:3837486-3837017 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 312 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 11, 230 |
| Conread position: | 27-276 |
| Cow position: | chr3:1739765-1739492 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-285 |
| Cow position: | chr3:53787956-53788238 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-288 |
| Cow position: | chr3:7155699-7155414 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-288 |
| Cow position: | chr3:12665245-12665530 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-288 |
| Cow position: | chr3:16225985-16226267 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 56, 28 |
| Conread position: | 27-288 |
| Cow position: | chr3:29574018-29573735 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 10, 222 |
| Conread position: | 27-288 |
| Cow position: | chr3:56297492-56297777 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-288 |
| Cow position: | chr3:78520155-78520440 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-299 |
| Cow position: | chr3:2834431-2834135 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-299 |
| Cow position: | chr3:35612262-35612551 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 39 |
| Conread position: | 27-299 |
| Cow position: | chr3:65473538-65473830 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 10, 232 |
| Conread position: | 27-401 |
| Cow position: | chr3:822982-822558 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-435 |
| Cow position: | chr3:6529100-6529558 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-435 |
| Cow position: | chr3:18862548-18863003 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-459 |
| Cow position: | chr3:14212498-14212980 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-459 |
| Cow position: | chr3:15416574-15417056 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-459 |
| Cow position: | chr3:52150178-52149696 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-459 |
| Cow position: | chr3:75772027-75771545 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-460 |
| Cow position: | chr3:579282-579763 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 323 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-460 |
| Cow position: | chr3:26742765-26742286 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-461 |
| Cow position: | chr3:2572635-2573119 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-461 |
| Cow position: | chr3:35043267-35043751 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 27-461 |
| Cow position: | chr3:76864539-76865023 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 29-161 |
| Cow position: | chr3:64683900-64683764 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 29-285 |
| Cow position: | chr3:30938606-30938888 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 29-285 |
| Cow position: | chr3:56102850-56103129 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 29-296 |
| Cow position: | chr3:52257405-52257125 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 29-299 |
| Cow position: | chr3:8605795-8605510 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 55, 43 |
| Conread position: | 29-461 |
| Cow position: | chr3:26993236-26993713 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 93 |
| Conread position: | 29-465 |
| Cow position: | chr3:37983256-37982770 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 29-465 |
| Cow position: | chr3:48362047-48362516 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 392 |
| Conread position: | 30-299 |
| Cow position: | chr3:49732684-49732394 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 56, 257 |
| Conread position: | 30-460 |
| Cow position: | chr3:65989032-65989497 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 195 |
| Conread position: | 31-288 |
| Cow position: | chr3:47272766-47272486 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 31-296 |
| Cow position: | chr3:11384431-11384713 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 55, 36 |
| Conread position: | 31-460 |
| Cow position: | chr3:56696961-56697428 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 120 |
| Conread position: | 31-460 |
| Cow position: | chr3:57481624-57481156 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 430 |
| Conread position: | 31-461 |
| Cow position: | chr3:15663331-15662875 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 31-461 |
| Cow position: | chr3:30321370-30321836 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 37 |
| Conread position: | 31-465 |
| Cow position: | chr3:21303450-21303000 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 114 |
| Conread position: | 33-299 |
| Cow position: | chr3:61173610-61173895 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 34-282 |
| Cow position: | chr3:84198898-84199155 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 50, 176 |
| Conread position: | 35-299 |
| Cow position: | chr3:72669444-72669156 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 35-460 |
| Cow position: | chr3:25056810-25057254 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 205 |
| Conread position: | 36-142 |
| Cow position: | chr3:3885081-3884973 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-200 |
| Cow position: | chr3:7481384-7481211 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-236 |
| Cow position: | chr3:10412364-10412586 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 216 |
| Conread position: | 36-243 |
| Cow position: | chr3:32768908-32769132 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 135 |
| Conread position: | 36-273 |
| Cow position: | chr3:30622992-30623252 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-276 |
| Cow position: | chr3:35342768-35343031 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-285 |
| Cow position: | chr3:21179141-21178867 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-285 |
| Cow position: | chr3:32490595-32490323 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-285 |
| Cow position: | chr3:33269349-33269613 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 64 |
| Conread position: | 36-285 |
| Cow position: | chr3:66968761-66968490 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-288 |
| Cow position: | chr3:10243777-10244052 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-288 |
| Cow position: | chr3:19216034-19216293 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 42, 70 |
| Conread position: | 36-288 |
| Cow position: | chr3:19883588-19883851 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 36-288 |
| Cow position: | chr3:24265316-24265591 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-288 |
| Cow position: | chr3:35619675-35619945 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 36-288 |
| Cow position: | chr3:41207448-41207173 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 36-288 |
| Cow position: | chr3:45977620-45977892 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 89, 50 |
| Conread position: | 36-288 |
| Cow position: | chr3:46858166-46857891 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-288 |
| Cow position: | chr3:49611090-49610818 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 47, 229 |
| Conread position: | 36-288 |
| Cow position: | chr3:49930953-49931228 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-288 |
| Cow position: | chr3:49999254-49999528 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 51, 107 |
| Conread position: | 36-288 |
| Cow position: | chr3:52651823-52651562 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 48, 99 |
| Conread position: | 36-288 |
| Cow position: | chr3:53880149-53879874 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-288 |
| Cow position: | chr3:54654057-54653782 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-288 |
| Cow position: | chr3:64875891-64876165 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-288 |
| Cow position: | chr3:66623330-66623579 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 36-288 |
| Cow position: | chr3:68273958-68274233 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-296 |
| Cow position: | chr3:8391483-8391756 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 36-296 |
| Cow position: | chr3:14438866-14438587 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 36 |
| Conread position: | 36-299 |
| Cow position: | chr3:2117564-2117849 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-299 |
| Cow position: | chr3:13276164-13275874 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-299 |
| Cow position: | chr3:29130212-29130496 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-299 |
| Cow position: | chr3:42186587-42186872 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 51, 206 |
| Conread position: | 36-299 |
| Cow position: | chr3:49416729-49416443 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-299 |
| Cow position: | chr3:64282198-64281917 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 48, 74 |
| Conread position: | 36-299 |
| Cow position: | chr3:64653786-64654072 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-299 |
| Cow position: | chr3:70322555-70322271 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 48, 73 |
| Conread position: | 36-299 |
| Cow position: | chr3:70914145-70913864 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 44, 223 |
| Conread position: | 36-299 |
| Cow position: | chr3:73636998-73637283 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-335 |
| Cow position: | chr3:54087248-54086927 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 39, 100 |
| Conread position: | 36-383 |
| Cow position: | chr3:33326499-33326896 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 275 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-383 |
| Cow position: | chr3:81101196-81101592 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 275 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-414 |
| Cow position: | chr3:72175188-72174761 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-426 |
| Cow position: | chr3:66888078-66887641 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 306 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 36-435 |
| Cow position: | chr3:34015529-34015977 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 313 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-435 |
| Cow position: | chr3:40520822-40520374 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 313 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-435 |
| Cow position: | chr3:43084361-43084788 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 245 |
| Conread position: | 36-435 |
| Cow position: | chr3:64024914-64024474 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-458 |
| Cow position: | chr3:58950579-58951046 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 309 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 50, 233 |
| Conread position: | 36-458 |
| Cow position: | chr3:60185053-60184582 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 51, 31 |
| Conread position: | 36-459 |
| Cow position: | chr3:302349-302811 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 50 |
| Conread position: | 36-459 |
| Cow position: | chr3:2866537-2866065 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 322 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-459 |
| Cow position: | chr3:11417664-11418136 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 36-459 |
| Cow position: | chr3:19881167-19881639 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-459 |
| Cow position: | chr3:20475632-20476088 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 312 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 47, 94 |
| Conread position: | 36-459 |
| Cow position: | chr3:20795411-20795883 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-459 |
| Cow position: | chr3:34504005-34503549 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 68 |
| Conread position: | 36-459 |
| Cow position: | chr3:35109344-35109816 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 325 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-459 |
| Cow position: | chr3:36416857-36417329 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 327 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-459 |
| Cow position: | chr3:37893949-37894419 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-459 |
| Cow position: | chr3:55245661-55246133 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-459 |
| Cow position: | chr3:56485142-56484665 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 329 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-459 |
| Cow position: | chr3:65085052-65085523 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 36-459 |
| Cow position: | chr3:74060587-74061057 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 246 |
| Conread position: | 36-459 |
| Cow position: | chr3:77366566-77366122 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 68 |
| Conread position: | 36-459 |
| Cow position: | chr3:79668228-79668700 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 323 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-460 |
| Cow position: | chr3:5474657-5475130 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 416 |
| Conread position: | 36-460 |
| Cow position: | chr3:6442186-6442657 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 323 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 36-460 |
| Cow position: | chr3:6838147-6838623 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 330 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-460 |
| Cow position: | chr3:7245986-7245518 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 36 |
| Conread position: | 36-460 |
| Cow position: | chr3:13311888-13311407 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 327 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 36-460 |
| Cow position: | chr3:14466744-14466281 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 325 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 78, 433 |
| Conread position: | 36-460 |
| Cow position: | chr3:14680205-14680672 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 320 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-460 |
| Cow position: | chr3:14864002-14864471 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 457 |
| Conread position: | 36-460 |
| Cow position: | chr3:16657751-16657282 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 36-460 |
| Cow position: | chr3:20379599-20379129 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 323 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 47, 446 |
| Conread position: | 36-460 |
| Cow position: | chr3:26722694-26722229 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 323 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 52, 381 |
| Conread position: | 36-460 |
| Cow position: | chr3:28435581-28435117 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 410 |
| Conread position: | 36-460 |
| Cow position: | chr3:30615819-30615353 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 39 |
| Conread position: | 36-460 |
| Cow position: | chr3:31021800-31022265 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 315 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-460 |
| Cow position: | chr3:31423009-31422535 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 325 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-460 |
| Cow position: | chr3:36121293-36121766 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 327 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-460 |
| Cow position: | chr3:36874943-36874471 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 407 |
| Conread position: | 36-460 |
| Cow position: | chr3:37972152-37972617 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 135 |
| Conread position: | 36-460 |
| Cow position: | chr3:42508091-42507623 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-460 |
| Cow position: | chr3:42846464-42846934 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 36-460 |
| Cow position: | chr3:43525621-43525149 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 321 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 36-460 |
| Cow position: | chr3:46682951-46683424 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 327 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-460 |
| Cow position: | chr3:47078495-47078022 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 320 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-460 |
| Cow position: | chr3:47986557-47987030 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 326 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-460 |
| Cow position: | chr3:49564134-49564607 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 326 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-460 |
| Cow position: | chr3:49907915-49907444 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 316 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-460 |
| Cow position: | chr3:50921157-50921617 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 308 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 52, 338 |
| Conread position: | 36-460 |
| Cow position: | chr3:53518920-53519373 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 338 |
| Conread position: | 36-460 |
| Cow position: | chr3:64376593-64376128 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 319 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 50, 385 |
| Conread position: | 36-460 |
| Cow position: | chr3:66829821-66829360 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 452 |
| Conread position: | 36-460 |
| Cow position: | chr3:68696847-68696384 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 58 |
| Conread position: | 36-460 |
| Cow position: | chr3:68870632-68870164 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 320 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-460 |
| Cow position: | chr3:72633191-72633663 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-460 |
| Cow position: | chr3:73451196-73450722 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 36-460 |
| Cow position: | chr3:75038724-75038251 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 36-460 |
| Cow position: | chr3:78024318-78023857 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 320 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 50, 381 |
| Conread position: | 36-461 |
| Cow position: | chr3:13035378-13034904 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-461 |
| Cow position: | chr3:26891608-26892082 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-461 |
| Cow position: | chr3:34557252-34556798 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 125 |
| Conread position: | 36-461 |
| Cow position: | chr3:45675660-45675186 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-461 |
| Cow position: | chr3:59332699-59333150 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 253 |
| Conread position: | 36-465 |
| Cow position: | chr3:59864600-59865075 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 50 |
| Conread position: | 36-471 |
| Cow position: | chr3:16114523-16114998 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 316 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 83, 74 |
| Conread position: | 37-270 |
| Cow position: | chr3:13117934-13117687 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 125, 82 |
| Conread position: | 37-279 |
| Cow position: | chr3:66977788-66978043 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 37-460 |
| Cow position: | chr3:64655329-64655795 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 324 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 46, 229 |
| Conread position: | 37-461 |
| Cow position: | chr3:56160696-56160235 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 320 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 82, 35 |
| Conread position: | 38-288 |
| Cow position: | chr3:68889452-68889180 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 147 |
| Conread position: | 38-401 |
| Cow position: | chr3:6864780-6865181 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 29 |
| Conread position: | 38-448 |
| Cow position: | chr3:31748800-31749245 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 433 |
| Conread position: | 38-453 |
| Cow position: | chr3:69271721-69272185 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 317 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 38-459 |
| Cow position: | chr3:2074902-2075370 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 324 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 49, 78 |
| Conread position: | 39-399 |
| Cow position: | chr3:77225854-77226246 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 291 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 48, 211 |
| Conread position: | 40-198 |
| Cow position: | chr3:6881838-6882002 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 43-288 |
| Cow position: | chr3:37599861-37600123 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 43-288 |
| Cow position: | chr3:77726580-77726828 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 45, 199 |
| Conread position: | 43-401 |
| Cow position: | chr3:10371501-10371897 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 96, 193 |
| Conread position: | 43-460 |
| Cow position: | chr3:54766128-54766544 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 286 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 161, 50 |
| Conread position: | 43-460 |
| Cow position: | chr3:79595759-79596206 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 5 |
| Conread position: | 43-461 |
| Cow position: | chr3:65536239-65536706 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 324 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 43-590 |
| Cow position: | chr3:40004359-40003789 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 294 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 44, 29 |
| Conread position: | 46-285 |
| Cow position: | chr3:23204547-23204287 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 68, 40 |
| Conread position: | 46-288 |
| Cow position: | chr3:15988067-15988332 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 46-288 |
| Cow position: | chr3:55374213-55374468 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 113, 29 |
| Conread position: | 46-435 |
| Cow position: | chr3:33254731-33254298 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 22 |
| Conread position: | 46-460 |
| Cow position: | chr3:40285188-40284758 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 296 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 37, 155 |
| Conread position: | 46-460 |
| Cow position: | chr3:69930706-69930246 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 46-465 |
| Cow position: | chr3:30351403-30351846 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 37, 339 |
| Conread position: | 48-460 |
| Cow position: | chr3:12667833-12668286 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 316 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 39, 61 |
| Conread position: | 49-288 |
| Cow position: | chr3:70215302-70215564 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 49-299 |
| Cow position: | chr3:34393156-34392882 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 38, 247 |
| Conread position: | 50-299 |
| Cow position: | chr3:11784495-11784763 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 52-299 |
| Cow position: | chr3:51235358-51235101 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 185 |
| Conread position: | 55-288 |
| Cow position: | chr3:13352991-13352746 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 30, 239 |
| Conread position: | 55-460 |
| Cow position: | chr3:24432518-24432967 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 311 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 32, 425 |
| Conread position: | 59-299 |
| Cow position: | chr3:25753395-25753657 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 60-435 |
| Cow position: | chr3:39921803-39921381 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 295 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 28, 49 |
| Conread position: | 69-460 |
| Cow position: | chr3:20781298-20780870 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 97 |
| Conread position: | 72-297 |
| Cow position: | chr3:22220296-22220542 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 75-279 |
| Cow position: | chr3:60932426-60932649 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 43 |
| Conread position: | 85-299 |
| Cow position: | chr3:14613201-14613431 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 127-451 |
| Cow position: | chr3:22918739-22919101 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 127-459 |
| Cow position: | chr3:49976310-49975939 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 32, 148 |
| Conread position: | 127-465 |
| Cow position: | chr3:21082089-21082456 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 36 |
| Conread position: | 130-460 |
| Cow position: | chr3:64293745-64294100 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 236 |
| Conread position: | 130-461 |
| Cow position: | chr3:6170691-6171063 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 260 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 178-400 |
| Cow position: | chr3:33692703-33692937 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 77, 29 |
| Conread position: | 178-401 |
| Cow position: | chr3:37040575-37040806 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 106, 30 |
| Conread position: | 180-401 |
| Cow position: | chr3:70336396-70336167 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 192-451 |
| Cow position: | chr3:18246287-18246004 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 195-459 |
| Cow position: | chr3:3372886-3372597 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 15, 281 |
| Conread position: | 195-459 |
| Cow position: | chr3:52045721-52045430 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 195-459 |
| Cow position: | chr3:80741169-80741460 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 195-460 |
| Cow position: | chr3:37020917-37020633 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 195-461 |
| Cow position: | chr3:34037267-34037560 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 195-461 |
| Cow position: | chr3:70074805-70074512 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 209-458 |
| Cow position: | chr3:37151093-37150818 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 209-461 |
| Cow position: | chr3:45748568-45748846 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 209-461 |
| Cow position: | chr3:81058213-81057935 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 214-460 |
| Cow position: | chr3:44536653-44536385 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 226-401 |
| Cow position: | chr3:78895581-78895397 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 257-460 |
| Cow position: | chr3:50204959-50205163 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 10 |
| Conread position: | 260-401 |
| Cow position: | chr3:3757077-3757222 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 280-460 |
| Cow position: | chr3:61242786-61242969 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 53, 136 |
| Conread position: | 280-460 |
| Cow position: | chr3:78200873-78200685 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 280-461 |
| Cow position: | chr3:7677902-7678085 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 139 |
| Conread position: | 281-465 |
| Cow position: | chr3:56524704-56524513 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 289-460 |
| Cow position: | chr3:12978879-12979054 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 11 |
| Conread position: | 295-459 |
| Cow position: | chr3:1516242-1516074 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 295-459 |
| Cow position: | chr3:8330694-8330865 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 295-459 |
| Cow position: | chr3:10449051-10448880 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-459 |
| Cow position: | chr3:26801503-26801674 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 295-459 |
| Cow position: | chr3:27687944-27687773 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-459 |
| Cow position: | chr3:32412148-32411977 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-459 |
| Cow position: | chr3:38747799-38747970 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-459 |
| Cow position: | chr3:49389680-49389509 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-460 |
| Cow position: | chr3:15052675-15052505 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-461 |
| Cow position: | chr3:30609710-30609883 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-461 |
| Cow position: | chr3:32356169-32356342 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 298-460 |
| Cow position: | chr3:17709592-17709761 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 35, 0 |
Show alignments to all cow chromosomes.