Cow genome map

Conread name: rcut32_e21.y1

Conread position: 1-285
Cow position: chr3:40048969-40049278 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 7

Conread position: 3-296
Cow position: chr3:61677621-61677935 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 16, 7

Conread position: 3-460
Cow position: chr3:13248939-13248430 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 7-288
Cow position: chr3:42977503-42977200 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 234

Conread position: 7-460
Cow position: chr3:83767334-83767835 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 342
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 31, 49

Conread position: 7-461
Cow position: chr3:26919811-26920319 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 447

Conread position: 7-464
Cow position: chr3:26566861-26567369 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 8-288
Cow position: chr3:50204651-50204957 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 6, 0

Conread position: 8-459
Cow position: chr3:21593370-21593871 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 346
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 6, 139

Conread position: 8-460
Cow position: chr3:6785403-6785904 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 8-460
Cow position: chr3:49605355-49604856 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 277

Conread position: 8-461
Cow position: chr3:37627977-37628474 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 23-383
Cow position: chr3:31050899-31050511 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 282
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 64, 27

Conread position: 24-299
Cow position: chr3:6896936-6897231 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 64, 18

Conread position: 24-459
Cow position: chr3:21779673-21779188 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 25-364
Cow position: chr3:77547924-77548296 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 252
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 111

Conread position: 25-457
Cow position: chr3:17937895-17937430 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 33

Conread position: 26-399
Cow position: chr3:13723605-13723182 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 290
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 26-419
Cow position: chr3:12673267-12672838 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 81

Conread position: 26-435
Cow position: chr3:40337039-40336580 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 320
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 0

Conread position: 26-451
Cow position: chr3:12750008-12750478 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 321
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 60, 17

Conread position: 26-459
Cow position: chr3:35918671-35919149 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 325
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 11, 0

Conread position: 26-460
Cow position: chr3:3837486-3837017 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 312
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 11, 230

Conread position: 27-276
Cow position: chr3:1739765-1739492 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 27-285
Cow position: chr3:53787956-53788238 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 27-288
Cow position: chr3:7155699-7155414 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 27-288
Cow position: chr3:12665245-12665530 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 27-288
Cow position: chr3:16225985-16226267 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 28

Conread position: 27-288
Cow position: chr3:29574018-29573735 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 10, 222

Conread position: 27-288
Cow position: chr3:56297492-56297777 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 27-288
Cow position: chr3:78520155-78520440 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 27-299
Cow position: chr3:2834431-2834135 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 27-299
Cow position: chr3:35612262-35612551 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 202
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 39

Conread position: 27-299
Cow position: chr3:65473538-65473830 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 208
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 10, 232

Conread position: 27-401
Cow position: chr3:822982-822558 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 294
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 10, 0

Conread position: 27-435
Cow position: chr3:6529100-6529558 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-435
Cow position: chr3:18862548-18863003 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-459
Cow position: chr3:14212498-14212980 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-459
Cow position: chr3:15416574-15417056 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-459
Cow position: chr3:52150178-52149696 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-459
Cow position: chr3:75772027-75771545 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-460
Cow position: chr3:579282-579763 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 323
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 10, 0

Conread position: 27-460
Cow position: chr3:26742765-26742286 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-461
Cow position: chr3:2572635-2573119 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-461
Cow position: chr3:35043267-35043751 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-461
Cow position: chr3:76864539-76865023 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 29-161
Cow position: chr3:64683900-64683764 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 30

Conread position: 29-285
Cow position: chr3:30938606-30938888 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 205
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 8, 0

Conread position: 29-285
Cow position: chr3:56102850-56103129 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 8, 28

Conread position: 29-296
Cow position: chr3:52257405-52257125 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 29-299
Cow position: chr3:8605795-8605510 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 55, 43

Conread position: 29-461
Cow position: chr3:26993236-26993713 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 93

Conread position: 29-465
Cow position: chr3:37983256-37982770 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 29-465
Cow position: chr3:48362047-48362516 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 392

Conread position: 30-299
Cow position: chr3:49732684-49732394 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 56, 257

Conread position: 30-460
Cow position: chr3:65989032-65989497 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 195

Conread position: 31-288
Cow position: chr3:47272766-47272486 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 0

Conread position: 31-296
Cow position: chr3:11384431-11384713 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 55, 36

Conread position: 31-460
Cow position: chr3:56696961-56697428 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 120

Conread position: 31-460
Cow position: chr3:57481624-57481156 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 430

Conread position: 31-461
Cow position: chr3:15663331-15662875 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 31-461
Cow position: chr3:30321370-30321836 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 37

Conread position: 31-465
Cow position: chr3:21303450-21303000 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 114

Conread position: 33-299
Cow position: chr3:61173610-61173895 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 34-282
Cow position: chr3:84198898-84199155 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 50, 176

Conread position: 35-299
Cow position: chr3:72669444-72669156 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 11

Conread position: 35-460
Cow position: chr3:25056810-25057254 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 205

Conread position: 36-142
Cow position: chr3:3885081-3884973 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 36-200
Cow position: chr3:7481384-7481211 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 36-236
Cow position: chr3:10412364-10412586 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 216

Conread position: 36-243
Cow position: chr3:32768908-32769132 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 135

Conread position: 36-273
Cow position: chr3:30622992-30623252 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 36-276
Cow position: chr3:35342768-35343031 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 36-285
Cow position: chr3:21179141-21178867 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 36-285
Cow position: chr3:32490595-32490323 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 36-285
Cow position: chr3:33269349-33269613 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 64

Conread position: 36-285
Cow position: chr3:66968761-66968490 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position: chr3:10243777-10244052 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 36-288
Cow position: chr3:19216034-19216293 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 70

Conread position: 36-288
Cow position: chr3:19883588-19883851 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 36-288
Cow position: chr3:24265316-24265591 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position: chr3:35619675-35619945 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 36-288
Cow position: chr3:41207448-41207173 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 36-288
Cow position: chr3:45977620-45977892 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 89, 50

Conread position: 36-288
Cow position: chr3:46858166-46857891 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position: chr3:49611090-49610818 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 47, 229

Conread position: 36-288
Cow position: chr3:49930953-49931228 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 36-288
Cow position: chr3:49999254-49999528 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 51, 107

Conread position: 36-288
Cow position: chr3:52651823-52651562 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 48, 99

Conread position: 36-288
Cow position: chr3:53880149-53879874 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position: chr3:54654057-54653782 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 36-288
Cow position: chr3:64875891-64876165 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position: chr3:66623330-66623579 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 50, 56

Conread position: 36-288
Cow position: chr3:68273958-68274233 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 36-296
Cow position: chr3:8391483-8391756 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 52, 0

Conread position: 36-296
Cow position: chr3:14438866-14438587 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 36

Conread position: 36-299
Cow position: chr3:2117564-2117849 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 36-299
Cow position: chr3:13276164-13275874 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 47, 0

Conread position: 36-299
Cow position: chr3:29130212-29130496 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 36-299
Cow position: chr3:42186587-42186872 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 51, 206

Conread position: 36-299
Cow position: chr3:49416729-49416443 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 36-299
Cow position: chr3:64282198-64281917 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 48, 74

Conread position: 36-299
Cow position: chr3:64653786-64654072 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 47, 0

Conread position: 36-299
Cow position: chr3:70322555-70322271 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 217
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 48, 73

Conread position: 36-299
Cow position: chr3:70914145-70913864 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 44, 223

Conread position: 36-299
Cow position: chr3:73636998-73637283 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 36-335
Cow position: chr3:54087248-54086927 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 219
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 39, 100

Conread position: 36-383
Cow position: chr3:33326499-33326896 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 275
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 36-383
Cow position: chr3:81101196-81101592 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 275
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 36-414
Cow position: chr3:72175188-72174761 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-426
Cow position: chr3:66888078-66887641 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 306
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 91, 0

Conread position: 36-435
Cow position: chr3:34015529-34015977 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 313
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 0

Conread position: 36-435
Cow position: chr3:40520822-40520374 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 313
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 51, 0

Conread position: 36-435
Cow position: chr3:43084361-43084788 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 245

Conread position: 36-435
Cow position: chr3:64024914-64024474 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-458
Cow position: chr3:58950579-58951046 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 309
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 50, 233

Conread position: 36-458
Cow position: chr3:60185053-60184582 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 321
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 51, 31

Conread position: 36-459
Cow position: chr3:302349-302811 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 50

Conread position: 36-459
Cow position: chr3:2866537-2866065 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 322
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position: chr3:11417664-11418136 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 36-459
Cow position: chr3:19881167-19881639 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-459
Cow position: chr3:20475632-20476088 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 312
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 47, 94

Conread position: 36-459
Cow position: chr3:20795411-20795883 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-459
Cow position: chr3:34504005-34503549 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 68

Conread position: 36-459
Cow position: chr3:35109344-35109816 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 325
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position: chr3:36416857-36417329 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 327
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position: chr3:37893949-37894419 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position: chr3:55245661-55246133 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position: chr3:56485142-56484665 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 329
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 47, 0

Conread position: 36-459
Cow position: chr3:65085052-65085523 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 36-459
Cow position: chr3:74060587-74061057 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 246

Conread position: 36-459
Cow position: chr3:77366566-77366122 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 68

Conread position: 36-459
Cow position: chr3:79668228-79668700 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 323
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 51, 0

Conread position: 36-460
Cow position: chr3:5474657-5475130 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 416

Conread position: 36-460
Cow position: chr3:6442186-6442657 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 323
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 48, 0

Conread position: 36-460
Cow position: chr3:6838147-6838623 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 330
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chr3:7245986-7245518 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 36

Conread position: 36-460
Cow position: chr3:13311888-13311407 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 327
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 16, 0

Conread position: 36-460
Cow position: chr3:14466744-14466281 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 325
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 433

Conread position: 36-460
Cow position: chr3:14680205-14680672 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 320
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 51, 0

Conread position: 36-460
Cow position: chr3:14864002-14864471 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 457

Conread position: 36-460
Cow position: chr3:16657751-16657282 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 36-460
Cow position: chr3:20379599-20379129 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 323
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 47, 446

Conread position: 36-460
Cow position: chr3:26722694-26722229 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 323
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 52, 381

Conread position: 36-460
Cow position: chr3:28435581-28435117 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 410

Conread position: 36-460
Cow position: chr3:30615819-30615353 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 39

Conread position: 36-460
Cow position: chr3:31021800-31022265 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 315
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chr3:31423009-31422535 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 325
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 36-460
Cow position: chr3:36121293-36121766 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 327
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chr3:36874943-36874471 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 407

Conread position: 36-460
Cow position: chr3:37972152-37972617 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 135

Conread position: 36-460
Cow position: chr3:42508091-42507623 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-460
Cow position: chr3:42846464-42846934 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 15

Conread position: 36-460
Cow position: chr3:43525621-43525149 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 321
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 45, 0

Conread position: 36-460
Cow position: chr3:46682951-46683424 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 327
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chr3:47078495-47078022 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 320
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chr3:47986557-47987030 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 326
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chr3:49564134-49564607 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 326
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chr3:49907915-49907444 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 316
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chr3:50921157-50921617 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 308
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 52, 338

Conread position: 36-460
Cow position: chr3:53518920-53519373 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 338

Conread position: 36-460
Cow position: chr3:64376593-64376128 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 319
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 50, 385

Conread position: 36-460
Cow position: chr3:66829821-66829360 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 452

Conread position: 36-460
Cow position: chr3:68696847-68696384 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 58

Conread position: 36-460
Cow position: chr3:68870632-68870164 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 320
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chr3:72633191-72633663 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 36-460
Cow position: chr3:73451196-73450722 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chr3:75038724-75038251 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 36-460
Cow position: chr3:78024318-78023857 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 320
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 50, 381

Conread position: 36-461
Cow position: chr3:13035378-13034904 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-461
Cow position: chr3:26891608-26892082 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-461
Cow position: chr3:34557252-34556798 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 125

Conread position: 36-461
Cow position: chr3:45675660-45675186 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-461
Cow position: chr3:59332699-59333150 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 253

Conread position: 36-465
Cow position: chr3:59864600-59865075 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 50

Conread position: 36-471
Cow position: chr3:16114523-16114998 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 316
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 83, 74

Conread position: 37-270
Cow position: chr3:13117934-13117687 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 125, 82

Conread position: 37-279
Cow position: chr3:66977788-66978043 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 38

Conread position: 37-460
Cow position: chr3:64655329-64655795 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 324
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 46, 229

Conread position: 37-461
Cow position: chr3:56160696-56160235 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 320
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 82, 35

Conread position: 38-288
Cow position: chr3:68889452-68889180 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 147

Conread position: 38-401
Cow position: chr3:6864780-6865181 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 29

Conread position: 38-448
Cow position: chr3:31748800-31749245 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 433

Conread position: 38-453
Cow position: chr3:69271721-69272185 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 317
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 45, 0

Conread position: 38-459
Cow position: chr3:2074902-2075370 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 324
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 49, 78

Conread position: 39-399
Cow position: chr3:77225854-77226246 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 291
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 48, 211

Conread position: 40-198
Cow position: chr3:6881838-6882002 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 43-288
Cow position: chr3:37599861-37600123 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 60, 0

Conread position: 43-288
Cow position: chr3:77726580-77726828 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 45, 199

Conread position: 43-401
Cow position: chr3:10371501-10371897 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 287
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 96, 193

Conread position: 43-460
Cow position: chr3:54766128-54766544 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 286
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 161, 50

Conread position: 43-460
Cow position: chr3:79595759-79596206 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 5

Conread position: 43-461
Cow position: chr3:65536239-65536706 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 324
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 0

Conread position: 43-590
Cow position: chr3:40004359-40003789 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 294
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 44, 29

Conread position: 46-285
Cow position: chr3:23204547-23204287 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 68, 40

Conread position: 46-288
Cow position: chr3:15988067-15988332 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 46-288
Cow position: chr3:55374213-55374468 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 29

Conread position: 46-435
Cow position: chr3:33254731-33254298 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 22

Conread position: 46-460
Cow position: chr3:40285188-40284758 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 296
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 37, 155

Conread position: 46-460
Cow position: chr3:69930706-69930246 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 46-465
Cow position: chr3:30351403-30351846 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 291
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 339

Conread position: 48-460
Cow position: chr3:12667833-12668286 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 316
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 39, 61

Conread position: 49-288
Cow position: chr3:70215302-70215564 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 49-299
Cow position: chr3:34393156-34392882 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 247

Conread position: 50-299
Cow position: chr3:11784495-11784763 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 52-299
Cow position: chr3:51235358-51235101 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 185

Conread position: 55-288
Cow position: chr3:13352991-13352746 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 239

Conread position: 55-460
Cow position: chr3:24432518-24432967 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 311
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 32, 425

Conread position: 59-299
Cow position: chr3:25753395-25753657 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 25, 0

Conread position: 60-435
Cow position: chr3:39921803-39921381 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 295
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 28, 49

Conread position: 69-460
Cow position: chr3:20781298-20780870 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 97

Conread position: 72-297
Cow position: chr3:22220296-22220542 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 75-279
Cow position: chr3:60932426-60932649 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 43

Conread position: 85-299
Cow position: chr3:14613201-14613431 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 127-451
Cow position: chr3:22918739-22919101 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 127-459
Cow position: chr3:49976310-49975939 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 255
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 32, 148

Conread position: 127-465
Cow position: chr3:21082089-21082456 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 36

Conread position: 130-460
Cow position: chr3:64293745-64294100 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 236

Conread position: 130-461
Cow position: chr3:6170691-6171063 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 260
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 178-400
Cow position: chr3:33692703-33692937 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 77, 29

Conread position: 178-401
Cow position: chr3:37040575-37040806 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 106, 30

Conread position: 180-401
Cow position: chr3:70336396-70336167 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 178
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 18, 94

Conread position: 192-451
Cow position: chr3:18246287-18246004 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 195-459
Cow position: chr3:3372886-3372597 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 15, 281

Conread position: 195-459
Cow position: chr3:52045721-52045430 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 195-459
Cow position: chr3:80741169-80741460 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 195-460
Cow position: chr3:37020917-37020633 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 0

Conread position: 195-461
Cow position: chr3:34037267-34037560 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 195-461
Cow position: chr3:70074805-70074512 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 209-458
Cow position: chr3:37151093-37150818 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 209-461
Cow position: chr3:45748568-45748846 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 209-461
Cow position: chr3:81058213-81057935 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 214-460
Cow position: chr3:44536653-44536385 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 68, 0

Conread position: 226-401
Cow position: chr3:78895581-78895397 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 257-460
Cow position: chr3:50204959-50205163 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 10

Conread position: 260-401
Cow position: chr3:3757077-3757222 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 25

Conread position: 280-460
Cow position: chr3:61242786-61242969 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 53, 136

Conread position: 280-460
Cow position: chr3:78200873-78200685 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 280-461
Cow position: chr3:7677902-7678085 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 139

Conread position: 281-465
Cow position: chr3:56524704-56524513 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 55, 0

Conread position: 289-460
Cow position: chr3:12978879-12979054 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 11

Conread position: 295-459
Cow position: chr3:1516242-1516074 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 295-459
Cow position: chr3:8330694-8330865 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 295-459
Cow position: chr3:10449051-10448880 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 295-459
Cow position: chr3:26801503-26801674 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 295-459
Cow position: chr3:27687944-27687773 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 295-459
Cow position: chr3:32412148-32411977 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 295-459
Cow position: chr3:38747799-38747970 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 295-459
Cow position: chr3:49389680-49389509 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 295-460
Cow position: chr3:15052675-15052505 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 295-461
Cow position: chr3:30609710-30609883 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 295-461
Cow position: chr3:32356169-32356342 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 298-460
Cow position: chr3:17709592-17709761 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 35, 0

Show alignments to all cow chromosomes.