Cow genome map

Conread name: rcut32_e21.y1

Conread position: 3-288
Cow position: chrX:6870601-6870290 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 4-459
Cow position: chrX:3372889-3372382 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 343
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 10, 0

Conread position: 7-451
Cow position: chrX:28624792-28624297 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 336
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 30, 183

Conread position: 7-461
Cow position: chrX:10866894-10866393 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 143

Conread position: 8-285
Cow position: chrX:4406851-4407154 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 18, 0

Conread position: 8-288
Cow position: chrX:22838239-22838546 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 6, 114

Conread position: 8-299
Cow position: chrX:26447067-26447364 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 79, 15

Conread position: 8-435
Cow position: chrX:5280884-5280406 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 329
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 11, 0

Conread position: 8-435
Cow position: chrX:18222380-18222860 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 334
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 6, 17

Conread position: 8-459
Cow position: chrX:24468156-24467654 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 340
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 7, 0

Conread position: 8-460
Cow position: chrX:2103372-2103877 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 346
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 6, 0

Conread position: 8-460
Cow position: chrX:35532823-35533323 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 180

Conread position: 8-461
Cow position: chrX:17889884-17889405 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 123

Conread position: 15-459
Cow position: chrX:3082157-3081660 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 340
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 15-460
Cow position: chrX:28518744-28518249 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 338
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 16, 471

Conread position: 21-288
Cow position: chrX:35287414-35287699 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 66, 22

Conread position: 24-280
Cow position: chrX:3649831-3649557 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 19

Conread position: 25-267
Cow position: chrX:9095631-9095895 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 25-299
Cow position: chrX:13178619-13178322 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 62, 0

Conread position: 26-299
Cow position: chrX:16278644-16278937 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 11, 0

Conread position: 26-299
Cow position: chrX:38217968-38218262 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 11, 47

Conread position: 26-459
Cow position: chrX:7276949-7277404 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 131

Conread position: 26-460
Cow position: chrX:10412987-10412498 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 480

Conread position: 26-460
Cow position: chrX:29908214-29907730 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 328
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 459

Conread position: 26-460
Cow position: chrX:29942147-29942622 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 324
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 11, 117

Conread position: 26-460
Cow position: chrX:46296650-46297132 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 256

Conread position: 27-270
Cow position: chrX:15175560-15175296 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 90

Conread position: 27-276
Cow position: chrX:26618113-26618386 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 27-288
Cow position: chrX:322903-323188 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 27-288
Cow position: chrX:19608665-19608950 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 27-288
Cow position: chrX:24346038-24346323 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 27-288
Cow position: chrX:28753347-28753066 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 243

Conread position: 27-299
Cow position: chrX:28867026-28866727 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 10, 0

Conread position: 27-299
Cow position: chrX:33537573-33537861 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 46

Conread position: 27-372
Cow position: chrX:11499785-11499399 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 264
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 27-400
Cow position: chrX:10059455-10059877 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 300
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 10, 20

Conread position: 27-435
Cow position: chrX:14462309-14462756 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 314
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 10, 45

Conread position: 27-435
Cow position: chrX:26275128-26275585 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 313
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 10, 0

Conread position: 27-457
Cow position: chrX:5332442-5331968 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 319
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 10, 0

Conread position: 27-459
Cow position: chrX:5334824-5334348 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 321
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 10, 0

Conread position: 27-459
Cow position: chrX:12359877-12360359 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 331
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 10, 0

Conread position: 27-459
Cow position: chrX:13928753-13928281 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 464

Conread position: 27-459
Cow position: chrX:18488725-18488243 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-459
Cow position: chrX:19474159-19473689 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 195

Conread position: 27-459
Cow position: chrX:27758698-27759178 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 333
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 10, 211

Conread position: 27-459
Cow position: chrX:29225467-29225949 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-459
Cow position: chrX:30200003-30199521 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-459
Cow position: chrX:39731148-39730668 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-460
Cow position: chrX:3360810-3361293 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-460
Cow position: chrX:16465296-16465772 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 27-460
Cow position: chrX:23342002-23341521 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 439

Conread position: 27-460
Cow position: chrX:26760579-26760096 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 332
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 10, 0

Conread position: 27-460
Cow position: chrX:39560670-39560180 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 338
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 10, 0

Conread position: 27-461
Cow position: chrX:2813494-2813009 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 328
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 10, 0

Conread position: 27-461
Cow position: chrX:36729373-36729857 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 29-193
Cow position: chrX:29047106-29047284 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 29-196
Cow position: chrX:9261405-9261579 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 8, 0

Conread position: 29-272
Cow position: chrX:41885186-41884921 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 8, 219

Conread position: 29-460
Cow position: chrX:5248382-5248856 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 333
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 13, 21

Conread position: 29-460
Cow position: chrX:31728458-31728935 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 30-461
Cow position: chrX:30229120-30228641 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 331
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 31-383
Cow position: chrX:35024063-35024450 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 265
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 55, 244

Conread position: 31-435
Cow position: chrX:30172712-30172260 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 313
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 56, 252

Conread position: 31-452
Cow position: chrX:30090048-30089589 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 311
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 65, 0

Conread position: 31-456
Cow position: chrX:22493028-22493475 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 55

Conread position: 31-459
Cow position: chrX:24109610-24109136 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 265

Conread position: 31-459
Cow position: chrX:28587966-28588442 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 324
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 36

Conread position: 31-460
Cow position: chrX:5354306-5353831 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 331
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 55, 23

Conread position: 31-461
Cow position: chrX:5647110-5646631 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 31-461
Cow position: chrX:11409340-11408861 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 31-461
Cow position: chrX:39352616-39352171 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 46

Conread position: 32-296
Cow position: chrX:4995611-4995892 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 66

Conread position: 33-461
Cow position: chrX:11074187-11073736 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 169

Conread position: 34-460
Cow position: chrX:44053813-44054275 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 319
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 49, 191

Conread position: 35-283
Cow position: chrX:28606086-28605827 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 52, 11

Conread position: 35-461
Cow position: chrX:38852162-38852632 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 8

Conread position: 35-465
Cow position: chrX:4481965-4482430 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 75

Conread position: 36-238
Cow position: chrX:9764072-9763847 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 36-239
Cow position: chrX:7120606-7120832 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 36-271
Cow position: chrX:6235848-6235599 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 6

Conread position: 36-276
Cow position: chrX:9169606-9169352 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 36-276
Cow position: chrX:26230759-26230496 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 36-276
Cow position: chrX:37852137-37852398 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 31

Conread position: 36-280
Cow position: chrX:26622809-26622554 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 99

Conread position: 36-281
Cow position: chrX:34094705-34094973 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 36-282
Cow position: chrX:12307763-12307494 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 36-282
Cow position: chrX:41156311-41156579 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 36-285
Cow position: chrX:8590579-8590853 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 36-285
Cow position: chrX:21793589-21793862 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 36-285
Cow position: chrX:29099418-29099688 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 20

Conread position: 36-285
Cow position: chrX:37080516-37080248 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 77

Conread position: 36-288
Cow position: chrX:1617234-1616960 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 36-288
Cow position: chrX:2500631-2500357 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 206

Conread position: 36-288
Cow position: chrX:5361009-5361284 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 36-288
Cow position: chrX:7484806-7485081 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 36-288
Cow position: chrX:9899337-9899070 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 32

Conread position: 36-288
Cow position: chrX:12345895-12346170 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position: chrX:15977954-15977679 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 36-288
Cow position: chrX:16085659-16085384 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position: chrX:17290182-17290454 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 67

Conread position: 36-288
Cow position: chrX:18023993-18023718 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 36-288
Cow position: chrX:21343394-21343669 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 36-288
Cow position: chrX:21389577-21389852 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position: chrX:23022317-23022587 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 36-288
Cow position: chrX:24588735-24588462 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 36-288
Cow position: chrX:27304928-27305203 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position: chrX:29916347-29916072 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 50, 244

Conread position: 36-288
Cow position: chrX:30053469-30053194 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 36-288
Cow position: chrX:30964987-30964712 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 36-288
Cow position: chrX:33685130-33685405 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 82

Conread position: 36-291
Cow position: chrX:620265-619987 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 209
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 47, 0

Conread position: 36-291
Cow position: chrX:28058321-28058602 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 36-293
Cow position: chrX:21414866-21415146 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 36-297
Cow position: chrX:11744269-11744550 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 106, 0

Conread position: 36-299
Cow position: chrX:1549964-1550250 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 36-299
Cow position: chrX:4905988-4905705 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 36-299
Cow position: chrX:7551802-7551516 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 36-299
Cow position: chrX:8400550-8400276 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 195

Conread position: 36-299
Cow position: chrX:11976446-11976161 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 36-299
Cow position: chrX:13406287-13406005 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 216

Conread position: 36-299
Cow position: chrX:14801819-14801535 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 28

Conread position: 36-299
Cow position: chrX:16525789-16526075 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 36-299
Cow position: chrX:16808815-16808529 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 36-299
Cow position: chrX:17782499-17782785 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 36-299
Cow position: chrX:21582442-21582728 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 36-299
Cow position: chrX:22539034-22538748 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 36-299
Cow position: chrX:22579388-22579102 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 192
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 36-299
Cow position: chrX:22869818-22870107 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 36-299
Cow position: chrX:25573351-25573635 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 223

Conread position: 36-299
Cow position: chrX:34761065-34761351 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 36-299
Cow position: chrX:38961851-38961565 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 36-372
Cow position: chrX:8482447-8482823 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 264
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 47, 19

Conread position: 36-384
Cow position: chrX:33763144-33763515 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 209
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 36-401
Cow position: chrX:33803987-33803592 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 278
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 123, 75

Conread position: 36-423
Cow position: chrX:13205954-13206387 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 301
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 51, 0

Conread position: 36-435
Cow position: chrX:2008699-2008258 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-435
Cow position: chrX:2559961-2559513 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 309
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 43, 0

Conread position: 36-435
Cow position: chrX:4342750-4343198 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-435
Cow position: chrX:5289685-5289239 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 312
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 51, 0

Conread position: 36-435
Cow position: chrX:14125245-14124799 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 303
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 47, 232

Conread position: 36-435
Cow position: chrX:20020580-20021024 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 36-444
Cow position: chrX:32145256-32144812 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 235

Conread position: 36-453
Cow position: chrX:44193437-44192975 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 316
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 36-456
Cow position: chrX:4622954-4622486 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 320
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position: chrX:2579418-2579890 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 320
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 0

Conread position: 36-459
Cow position: chrX:3418137-3417666 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 327
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 47, 246

Conread position: 36-459
Cow position: chrX:5320715-5320248 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 325
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 91, 146

Conread position: 36-459
Cow position: chrX:5866145-5866617 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 324
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position: chrX:6453696-6454167 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 326
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 47, 430

Conread position: 36-459
Cow position: chrX:8640787-8641259 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 320
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 48, 0

Conread position: 36-459
Cow position: chrX:9128054-9128527 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 320
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position: chrX:9642433-9641961 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-459
Cow position: chrX:12145098-12145573 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 328
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 47, 0

Conread position: 36-459
Cow position: chrX:14050194-14049723 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-459
Cow position: chrX:16854366-16853919 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 155

Conread position: 36-459
Cow position: chrX:18656806-18656334 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-459
Cow position: chrX:19398777-19399249 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 327
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 0

Conread position: 36-459
Cow position: chrX:21767799-21768275 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 327
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 47, 0

Conread position: 36-459
Cow position: chrX:22077341-22076871 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 36-459
Cow position: chrX:22564684-22564216 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 313
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position: chrX:25289680-25289208 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 36-459
Cow position: chrX:27095136-27095590 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 47

Conread position: 36-459
Cow position: chrX:28503335-28503807 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 318
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position: chrX:30836386-30836844 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 320
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 51, 345

Conread position: 36-459
Cow position: chrX:36195095-36195563 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-459
Cow position: chrX:37404230-37403765 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 319
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 0

Conread position: 36-459
Cow position: chrX:39185172-39185644 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chrX:671994-671531 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-460
Cow position: chrX:2048111-2048584 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 323
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 42, 0

Conread position: 36-460
Cow position: chrX:6372179-6372653 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chrX:7572390-7572852 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 323
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 47, 206

Conread position: 36-460
Cow position: chrX:8435200-8434732 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 321
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 91, 66

Conread position: 36-460
Cow position: chrX:9011330-9011799 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 322
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chrX:10445416-10444943 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chrX:11146335-11145865 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 36-460
Cow position: chrX:14597845-14598318 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 324
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 51, 0

Conread position: 36-460
Cow position: chrX:15621532-15621060 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 319
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chrX:16087124-16086651 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 325
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 51, 0

Conread position: 36-460
Cow position: chrX:16360008-16359537 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 324
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chrX:18243992-18244454 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 36

Conread position: 36-460
Cow position: chrX:21226478-21226946 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 89

Conread position: 36-460
Cow position: chrX:21685618-21686091 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chrX:21832885-21833341 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 304
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 50, 0

Conread position: 36-460
Cow position: chrX:22887661-22888130 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 36-460
Cow position: chrX:23387534-23387066 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 328
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 50, 64

Conread position: 36-460
Cow position: chrX:23395606-23396079 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chrX:23452448-23451973 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 326
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 36-460
Cow position: chrX:24769857-24769388 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 458

Conread position: 36-460
Cow position: chrX:27754427-27754901 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chrX:27983352-27982898 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 302
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 54, 49

Conread position: 36-460
Cow position: chrX:28879582-28879134 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 86

Conread position: 36-460
Cow position: chrX:29849624-29849160 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 426

Conread position: 36-460
Cow position: chrX:30180925-30180455 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 328
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 47, 212

Conread position: 36-460
Cow position: chrX:31495736-31496208 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-460
Cow position: chrX:31978841-31978369 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 36-460
Cow position: chrX:37117908-37118369 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 382

Conread position: 36-460
Cow position: chrX:38150688-38151161 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 32

Conread position: 36-460
Cow position: chrX:38231268-38230795 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 36-460
Cow position: chrX:39548398-39548871 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chrX:39713550-39714023 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 326
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 47, 0

Conread position: 36-460
Cow position: chrX:40225235-40224773 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 321
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 51, 97

Conread position: 36-460
Cow position: chrX:42222770-42222316 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 36-460
Cow position: chrX:42732871-42733338 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 312
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 50, 0

Conread position: 36-461
Cow position: chrX:2293601-2293127 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-461
Cow position: chrX:22810888-22811362 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 324
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 20, 371

Conread position: 36-461
Cow position: chrX:23986249-23986722 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 438

Conread position: 36-461
Cow position: chrX:27318230-27318704 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 36-461
Cow position: chrX:29912340-29912812 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 323
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 51, 38

Conread position: 36-461
Cow position: chrX:30059886-30060361 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 324
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 36-461
Cow position: chrX:32584931-32584459 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 418

Conread position: 36-461
Cow position: chrX:32643485-32643959 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 36-463
Cow position: chrX:10438906-10438463 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 135

Conread position: 36-465
Cow position: chrX:18455771-18455305 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 319
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 51, 36

Conread position: 37-401
Cow position: chrX:13031650-13031250 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 277
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 50, 338

Conread position: 37-459
Cow position: chrX:6580935-6581405 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 324
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 50, 231

Conread position: 37-460
Cow position: chrX:16035508-16035040 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 321
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 74

Conread position: 37-460
Cow position: chrX:17891546-17892011 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 316
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 47, 85

Conread position: 38-285
Cow position: chrX:29083068-29083338 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 38-288
Cow position: chrX:3465073-3464803 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 74, 0

Conread position: 38-460
Cow position: chrX:7754907-7755373 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 312
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 49, 0

Conread position: 38-460
Cow position: chrX:22612404-22612857 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 244

Conread position: 41-465
Cow position: chrX:6044453-6044012 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 287
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 98, 39

Conread position: 43-279
Cow position: chrX:21818449-21818215 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 15

Conread position: 43-428
Cow position: chrX:24279923-24280343 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 355

Conread position: 43-435
Cow position: chrX:16046154-16046594 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 305
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 40, 25

Conread position: 43-435
Cow position: chrX:38228311-38227865 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 303
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 66

Conread position: 43-460
Cow position: chrX:1947935-1947487 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 43-460
Cow position: chrX:16782288-16782752 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 324
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 43, 15

Conread position: 43-460
Cow position: chrX:21254785-21255248 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 43-474
Cow position: chrX:31261627-31261150 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 327
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 44, 220

Conread position: 46-288
Cow position: chrX:39939744-39939479 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 40, 0

Conread position: 46-471
Cow position: chrX:22125846-22125384 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 321
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 42, 64

Conread position: 47-460
Cow position: chrX:38330394-38330854 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 314
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 48-460
Cow position: chrX:34442417-34441971 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 313
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 39, 11

Conread position: 48-465
Cow position: chrX:39559342-39558888 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 50-299
Cow position: chrX:24316835-24317107 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 50-460
Cow position: chrX:30164225-30163766 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 314
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 51-459
Cow position: chrX:5392561-5392104 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 310
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 51-460
Cow position: chrX:30196312-30196769 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 314
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 37, 0

Conread position: 52-459
Cow position: chrX:15260604-15260148 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 317
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 31, 0

Conread position: 52-465
Cow position: chrX:4751345-4750895 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 16

Conread position: 54-465
Cow position: chrX:6766717-6766268 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 307
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 298

Conread position: 77-538
Cow position: chrX:17793895-17794378 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 208

Conread position: 79-460
Cow position: chrX:31372507-31372935 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 302
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 60, 8

Conread position: 81-299
Cow position: chrX:6543311-6543548 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 82-459
Cow position: chrX:5124312-5123888 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 293
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 45, 0

Conread position: 83-463
Cow position: chrX:41527461-41527037 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 307
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 42, 27

Conread position: 90-299
Cow position: chrX:23969408-23969637 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 20, 168

Conread position: 127-459
Cow position: chrX:13031113-13030740 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 255
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 127-460
Cow position: chrX:18898551-18898178 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 264
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 32, 357

Conread position: 127-460
Cow position: chrX:45236564-45236938 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 260
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 127-461
Cow position: chrX:36479537-36479162 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 130-459
Cow position: chrX:8529641-8530011 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 252
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 130-459
Cow position: chrX:11855266-11855640 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 263
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 29, 0

Conread position: 133-460
Cow position: chrX:37815699-37816062 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 252
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 26

Conread position: 135-459
Cow position: chrX:14459057-14458696 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 137-465
Cow position: chrX:26974018-26974387 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 253
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 140-460
Cow position: chrX:40581052-40580691 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 158-452
Cow position: chrX:32182878-32182572 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 205
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 74, 22

Conread position: 158-460
Cow position: chrX:2932585-2932248 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 160-461
Cow position: chrX:30422000-30421675 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 30, 0

Conread position: 178-461
Cow position: chrX:11083440-11083137 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 215
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 91, 30

Conread position: 182-456
Cow position: chrX:41879750-41879462 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 22, 0

Conread position: 182-461
Cow position: chrX:7177837-7178136 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 22, 0

Conread position: 185-411
Cow position: chrX:35408805-35409058 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 44

Conread position: 192-461
Cow position: chrX:18451902-18451606 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 193-459
Cow position: chrX:24509045-24509338 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 194-411
Cow position: chrX:26633899-26633684 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 108

Conread position: 195-459
Cow position: chrX:362273-361982 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 195-459
Cow position: chrX:5892408-5892699 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 195-459
Cow position: chrX:30817089-30816798 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 195-459
Cow position: chrX:33763524-33763815 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 195-459
Cow position: chrX:34253409-34253700 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 195-460
Cow position: chrX:2274100-2274389 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 195-461
Cow position: chrX:30139604-30139311 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 195-461
Cow position: chrX:30824828-30825121 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 195-461
Cow position: chrX:34719693-34719986 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 209-459
Cow position: chrX:15346774-15346498 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 69, 0

Conread position: 209-461
Cow position: chrX:28706297-28706575 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 228-461
Cow position: chrX:1976365-1976124 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 258-460
Cow position: chrX:33538194-33538399 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 9, 28

Conread position: 261-465
Cow position: chrX:35388640-35388433 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 75, 21

Conread position: 262-460
Cow position: chrX:35609259-35609458 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 71, 6

Conread position: 269-461
Cow position: chrX:12996581-12996382 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 276-459
Cow position: chrX:17291215-17291401 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 276-465
Cow position: chrX:38007700-38007501 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 25

Conread position: 277-435
Cow position: chrX:26230231-26230069 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 277-459
Cow position: chrX:38961564-38961375 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 280-536
Cow position: chrX:46093533-46093289 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 226, 147

Conread position: 282-459
Cow position: chrX:11358778-11358594 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 286-460
Cow position: chrX:45464738-45464918 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 11, 106

Conread position: 288-456
Cow position: chrX:11819660-11819832 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 288-459
Cow position: chrX:42120596-42120774 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 291-456
Cow position: chrX:40475531-40475361 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 291-459
Cow position: chrX:1576967-1576792 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 291-459
Cow position: chrX:12001852-12001676 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 291-459
Cow position: chrX:37080223-37080048 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 291-460
Cow position: chrX:12290034-12290209 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 166

Conread position: 292-460
Cow position: chrX:44206259-44206434 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 166

Conread position: 295-435
Cow position: chrX:7486164-7486311 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 295-459
Cow position: chrX:7119344-7119173 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 295-459
Cow position: chrX:10923271-10923100 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 295-459
Cow position: chrX:12457998-12458168 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 41, 115

Conread position: 295-459
Cow position: chrX:22521921-22521750 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 295-459
Cow position: chrX:26617621-26617450 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 295-459
Cow position: chrX:30821884-30822055 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 295-459
Cow position: chrX:38014394-38014565 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 295-460
Cow position: chrX:9854578-9854745 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 295-460
Cow position: chrX:10146367-10146195 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 295-460
Cow position: chrX:10931973-10932145 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 295-460
Cow position: chrX:13971939-13971767 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 295-460
Cow position: chrX:18462675-18462503 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 295-460
Cow position: chrX:26506641-26506469 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 295-460
Cow position: chrX:29841869-29841697 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 295-460
Cow position: chrX:38052132-38051960 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 295-460
Cow position: chrX:41886128-41886300 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 295-461
Cow position: chrX:10465085-10465258 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 295-461
Cow position: chrX:27395729-27395564 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 295-461
Cow position: chrX:29602733-29602567 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 129, 78

Conread position: 298-460
Cow position: chrX:22812365-22812534 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 298-461
Cow position: chrX:28133418-28133587 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 301-461
Cow position: chrX:30965407-30965574 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 0

Show alignments to all cow chromosomes.