Cow genome map

Conread name: rcut36_b11.y1

Conread position: 1-264
Cow position:
Alignm length: 271
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 113, 92

Conread position: 1-264
Cow position:
Alignm length: 273
Alignm identity: 203
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 60, 30

Conread position: 2-261
Cow position:
Alignm length: 269
Alignm identity: 195
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 60, 29

Conread position: 2-261
Cow position:
Alignm length: 269
Alignm identity: 196
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 60, 29

Conread position: 3-252
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 106, 28

Conread position: 3-289
Cow position:
Alignm length: 291
Alignm identity: 196
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 107, 60

Conread position: 4-252
Cow position:
Alignm length: 256
Alignm identity: 191
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 58, 27

Conread position: 4-259
Cow position:
Alignm length: 262
Alignm identity: 180
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 16, 41

Conread position: 4-261
Cow position:
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 20

Conread position: 7-179
Cow position:
Alignm length: 180
Alignm identity: 141
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 53, 16

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 184
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 16

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 182
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 53, 14

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 183
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 52, 14

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 16

Conread position: 7-243
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 80, 17

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 14

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 185
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 53, 16

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 188
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 53, 16

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 188
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 53, 16

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 14

Conread position: 7-255
Cow position:
Alignm length: 256
Alignm identity: 186
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 14

Conread position: 7-255
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 53, 14

Conread position: 7-255
Cow position:
Alignm length: 256
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 53, 16

Conread position: 7-255
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 14

Conread position: 7-255
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 14

Conread position: 7-258
Cow position:
Alignm length: 261
Alignm identity: 189
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 55, 14

Conread position: 7-259
Cow position:
Alignm length: 260
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 14

Conread position: 7-259
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 101, 16

Conread position: 7-259
Cow position:
Alignm length: 262
Alignm identity: 197
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 53, 14

Conread position: 7-261
Cow position:
Alignm length: 263
Alignm identity: 197
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 53, 16

Conread position: 7-261
Cow position:
Alignm length: 264
Alignm identity: 197
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 54, 14

Conread position: 7-261
Cow position:
Alignm length: 258
Alignm identity: 188
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 102, 16

Conread position: 8-210
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 15

Conread position: 8-261
Cow position:
Alignm length: 264
Alignm identity: 194
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 55, 19

Conread position: 9-242
Cow position:
Alignm length: 235
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 201

Conread position: 9-252
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 46

Conread position: 9-255
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 19, 38

Conread position: 9-255
Cow position:
Alignm length: 249
Alignm identity: 175
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 13, 42

Conread position: 9-259
Cow position:
Alignm length: 264
Alignm identity: 190
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 53, 12

Conread position: 9-261
Cow position:
Alignm length: 257
Alignm identity: 182
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 11, 39

Conread position: 9-261
Cow position:
Alignm length: 262
Alignm identity: 191
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 52, 33

Conread position: 10-210
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 98, 0

Conread position: 10-220
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 52, 26

Conread position: 10-241
Cow position:
Alignm length: 233
Alignm identity: 166
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 12, 200

Conread position: 10-241
Cow position:
Alignm length: 234
Alignm identity: 175
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 12, 201

Conread position: 10-243
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 12, 212

Conread position: 10-243
Cow position:
Alignm length: 236
Alignm identity: 173
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 12, 201

Conread position: 10-255
Cow position:
Alignm length: 250
Alignm identity: 184
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 12, 35

Conread position: 10-255
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 21

Conread position: 10-255
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 49, 11

Conread position: 10-256
Cow position:
Alignm length: 256
Alignm identity: 197
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 52, 13

Conread position: 10-259
Cow position:
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 26

Conread position: 10-259
Cow position:
Alignm length: 254
Alignm identity: 180
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 12, 201

Conread position: 10-259
Cow position:
Alignm length: 259
Alignm identity: 189
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 50, 18

Conread position: 10-259
Cow position:
Alignm length: 254
Alignm identity: 186
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 12, 201

Conread position: 10-259
Cow position:
Alignm length: 254
Alignm identity: 186
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 25, 201

Conread position: 10-261
Cow position:
Alignm length: 256
Alignm identity: 186
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 34, 51

Conread position: 11-179
Cow position:
Alignm length: 176
Alignm identity: 138
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 12

Conread position: 11-239
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 51, 20

Conread position: 11-239
Cow position:
Alignm length: 237
Alignm identity: 183
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 51, 12

Conread position: 11-242
Cow position:
Alignm length: 239
Alignm identity: 177
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 49, 20

Conread position: 11-243
Cow position:
Alignm length: 240
Alignm identity: 180
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 49, 20

Conread position: 11-243
Cow position:
Alignm length: 235
Alignm identity: 175
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 44, 20

Conread position: 11-244
Cow position:
Alignm length: 241
Alignm identity: 184
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 51, 20

Conread position: 11-255
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 49, 20

Conread position: 11-255
Cow position:
Alignm length: 252
Alignm identity: 184
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 51, 20

Conread position: 11-257
Cow position:
Alignm length: 256
Alignm identity: 190
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 52, 20

Conread position: 11-259
Cow position:
Alignm length: 257
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 49, 20

Conread position: 11-259
Cow position:
Alignm length: 257
Alignm identity: 196
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 49, 12

Conread position: 11-260
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 49, 20

Conread position: 11-261
Cow position:
Alignm length: 260
Alignm identity: 195
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 51, 20

Conread position: 11-261
Cow position:
Alignm length: 260
Alignm identity: 193
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 51, 20

Conread position: 11-261
Cow position:
Alignm length: 257
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 20

Conread position: 11-261
Cow position:
Alignm length: 259
Alignm identity: 188
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 52, 20

Conread position: 11-261
Cow position:
Alignm length: 260
Alignm identity: 188
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 52, 20

Conread position: 11-261
Cow position:
Alignm length: 260
Alignm identity: 188
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 51, 20

Conread position: 11-261
Cow position:
Alignm length: 260
Alignm identity: 191
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 51, 20

Conread position: 11-261
Cow position:
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 25

Conread position: 12-243
Cow position:
Alignm length: 240
Alignm identity: 183
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 15, 20

Conread position: 12-252
Cow position:
Alignm length: 243
Alignm identity: 176
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 205

Conread position: 12-261
Cow position:
Alignm length: 259
Alignm identity: 188
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 48, 19

Conread position: 13-261
Cow position:
Alignm length: 258
Alignm identity: 186
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 49, 20

Conread position: 14-176
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 47, 23

Conread position: 14-255
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 48, 17

Conread position: 14-255
Cow position:
Alignm length: 249
Alignm identity: 184
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 46, 17

Conread position: 15-213
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 64

Conread position: 15-223
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 47, 27

Conread position: 15-239
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 47, 16

Conread position: 15-255
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 45, 16

Conread position: 15-261
Cow position:
Alignm length: 256
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 16

Conread position: 16-255
Cow position:
Alignm length: 264
Alignm identity: 194
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 21, 217

Conread position: 16-259
Cow position:
Alignm length: 251
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 21

Conread position: 16-261
Cow position:
Alignm length: 256
Alignm identity: 192
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 11, 16

Conread position: 16-261
Cow position:
Alignm length: 256
Alignm identity: 191
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 11, 21

Conread position: 17-261
Cow position:
Alignm length: 255
Alignm identity: 190
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 45, 14

Conread position: 20-261
Cow position:
Alignm length: 253
Alignm identity: 189
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 42, 11

Conread position: 21-239
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 38, 199

Conread position: 21-243
Cow position:
Alignm length: 232
Alignm identity: 180
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 17, 197

Conread position: 21-255
Cow position:
Alignm length: 242
Alignm identity: 181
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 41, 10

Conread position: 23-252
Cow position:
Alignm length: 236
Alignm identity: 174
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 37, 14

Conread position: 36-239
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 26, 42

Conread position: 36-255
Cow position:
Alignm length: 227
Alignm identity: 173
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 24, 120

Conread position: 36-255
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 26, 178

Conread position: 36-258
Cow position:
Alignm length: 229
Alignm identity: 176
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 26, 78

Conread position: 36-259
Cow position:
Alignm length: 228
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 178

Conread position: 36-260
Cow position:
Alignm length: 231
Alignm identity: 176
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 24, 73

Conread position: 36-261
Cow position:
Alignm length: 232
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 44

Conread position: 36-264
Cow position:
Alignm length: 248
Alignm identity: 187
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 24, 161

Conread position: 41-264
Cow position:
Alignm length: 228
Alignm identity: 167
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 81, 13

Conread position: 42-255
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 199, 18

Conread position: 44-239
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 141

Conread position: 44-245
Cow position:
Alignm length: 210
Alignm identity: 165
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 18, 179

Conread position: 50-226
Cow position:
Alignm length: 178
Alignm identity: 138
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 58, 160

Conread position: 54-255
Cow position:
Alignm length: 204
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 56, 31

Conread position: 58-252
Cow position:
Alignm length: 196
Alignm identity: 156
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 52, 8

Conread position: 58-259
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 53, 158

Conread position: 60-261
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 49, 157

Conread position: 60-262
Cow position:
Alignm length: 206
Alignm identity: 161
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 50, 157

Conread position: 70-252
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 112

Conread position: 70-259
Cow position:
Alignm length: 193
Alignm identity: 149
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 39, 141

Conread position: 83-255
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 128

Conread position: 87-228
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 124

Conread position: 87-259
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 124

Conread position: 95-259
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 115

Conread position: 98-261
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 11, 118

Conread position: 100-252
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 10, 111

Conread position: 108-252
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 101, 0

Conread position: 116-252
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 7, 100

Conread position: 117-255
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 129-264
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 114, 81

Show alignments to all cow chromosomes.