Cow genome map
| Conread name: | rcut36_b11.y1 |
| Conread position: | 1-264 |
| Cow position: | chr1:30520274-30520539 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 113, 92 |
| Conread position: | 1-264 |
| Cow position: | chr1:99914921-99915185 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 60, 30 |
| Conread position: | 2-261 |
| Cow position: | chr1:12060725-12060461 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 2-261 |
| Cow position: | chr1:52357778-52357512 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 3-252 |
| Cow position: | chr1:102433550-102433305 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 106, 28 |
| Conread position: | 3-289 |
| Cow position: | chr1:55320592-55320307 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 107, 60 |
| Conread position: | 4-252 |
| Cow position: | chr1:57364863-57364613 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 58, 27 |
| Conread position: | 4-259 |
| Cow position: | chr1:29607576-29607319 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 16, 41 |
| Conread position: | 4-261 |
| Cow position: | chr1:31364621-31364356 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 20 |
| Conread position: | 7-179 |
| Cow position: | chr1:80445640-80445815 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 7-243 |
| Cow position: | chr1:4209697-4209935 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 7-243 |
| Cow position: | chr1:20830384-20830622 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 7-243 |
| Cow position: | chr1:29363784-29364022 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 7-243 |
| Cow position: | chr1:50210353-50210115 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 7-243 |
| Cow position: | chr1:50248209-50247983 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 80, 17 |
| Conread position: | 7-243 |
| Cow position: | chr1:53200034-53200271 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 7-243 |
| Cow position: | chr1:59207590-59207352 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 7-243 |
| Cow position: | chr1:77923197-77923435 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 7-243 |
| Cow position: | chr1:82565602-82565840 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 7-243 |
| Cow position: | chr1:85793170-85793408 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 7-255 |
| Cow position: | chr1:18964880-18964630 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 7-255 |
| Cow position: | chr1:33897749-33897999 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 7-255 |
| Cow position: | chr1:40056593-40056843 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 7-255 |
| Cow position: | chr1:56724633-56724883 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 7-255 |
| Cow position: | chr1:81288624-81288874 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 7-258 |
| Cow position: | chr1:10724070-10724323 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 55, 14 |
| Conread position: | 7-259 |
| Cow position: | chr1:24652755-24653009 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 7-259 |
| Cow position: | chr1:67002647-67002898 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 101, 16 |
| Conread position: | 7-259 |
| Cow position: | chr1:71561256-71561000 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 197 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 7-261 |
| Cow position: | chr1:17940281-17940024 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 7-261 |
| Cow position: | chr1:24442872-24442614 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 54, 14 |
| Conread position: | 7-261 |
| Cow position: | chr1:42737922-42738176 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 102, 16 |
| Conread position: | 8-210 |
| Cow position: | chr1:77115181-77114968 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 53, 15 |
| Conread position: | 8-261 |
| Cow position: | chr1:73069569-73069313 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 9-242 |
| Cow position: | chr1:56165029-56165262 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 99, 201 |
| Conread position: | 9-252 |
| Cow position: | chr1:68606054-68605812 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 35, 46 |
| Conread position: | 9-255 |
| Cow position: | chr1:9379024-9378779 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 19, 38 |
| Conread position: | 9-255 |
| Cow position: | chr1:67833641-67833397 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 13, 42 |
| Conread position: | 9-259 |
| Cow position: | chr1:67910038-67910292 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 53, 12 |
| Conread position: | 9-261 |
| Cow position: | chr1:63604278-63604025 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 9-261 |
| Cow position: | chr1:76750483-76750225 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 52, 33 |
| Conread position: | 10-210 |
| Cow position: | chr1:86595000-86594799 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 10-220 |
| Cow position: | chr1:39107075-39107283 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 52, 26 |
| Conread position: | 10-241 |
| Cow position: | chr1:21592083-21592314 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 12, 200 |
| Conread position: | 10-241 |
| Cow position: | chr1:40575693-40575925 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 12, 201 |
| Conread position: | 10-243 |
| Cow position: | chr1:39545280-39545514 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 12, 212 |
| Conread position: | 10-243 |
| Cow position: | chr1:69768073-69768307 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 12, 201 |
| Conread position: | 10-255 |
| Cow position: | chr1:21088925-21089170 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 12, 35 |
| Conread position: | 10-255 |
| Cow position: | chr1:88132266-88132515 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 53, 21 |
| Conread position: | 10-255 |
| Cow position: | chr1:91900514-91900761 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 49, 11 |
| Conread position: | 10-256 |
| Cow position: | chr1:76741741-76741493 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 197 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 52, 13 |
| Conread position: | 10-259 |
| Cow position: | chr1:34694177-34694431 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 10-259 |
| Cow position: | chr1:57423339-57423087 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 12, 201 |
| Conread position: | 10-259 |
| Cow position: | chr1:80357680-80357425 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 10-259 |
| Cow position: | chr1:82477469-82477721 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 12, 201 |
| Conread position: | 10-259 |
| Cow position: | chr1:86546644-86546392 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 25, 201 |
| Conread position: | 10-261 |
| Cow position: | chr1:69404494-69404747 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 11-179 |
| Cow position: | chr1:20525972-20526143 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 49, 12 |
| Conread position: | 11-239 |
| Cow position: | chr1:33552419-33552652 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 11-239 |
| Cow position: | chr1:90607385-90607155 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 51, 12 |
| Conread position: | 11-242 |
| Cow position: | chr1:33852759-33852995 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 11-243 |
| Cow position: | chr1:17011245-17011011 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 11-243 |
| Cow position: | chr1:85778960-85778728 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 44, 20 |
| Conread position: | 11-244 |
| Cow position: | chr1:25551454-25551692 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 184 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 11-255 |
| Cow position: | chr1:40683252-40683003 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 11-255 |
| Cow position: | chr1:93856004-93856251 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 11-257 |
| Cow position: | chr1:62243163-62242910 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 11-259 |
| Cow position: | chr1:17035104-17034850 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 11-259 |
| Cow position: | chr1:40511528-40511278 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 49, 12 |
| Conread position: | 11-260 |
| Cow position: | chr1:25053784-25054039 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 11-261 |
| Cow position: | chr1:26517399-26517142 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 11-261 |
| Cow position: | chr1:28874557-28874814 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 11-261 |
| Cow position: | chr1:30074361-30074615 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 11-261 |
| Cow position: | chr1:55778078-55778333 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 11-261 |
| Cow position: | chr1:62804685-62804429 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 11-261 |
| Cow position: | chr1:72185390-72185133 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 11-261 |
| Cow position: | chr1:79455463-79455206 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 11-261 |
| Cow position: | chr1:94661162-94661416 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 25 |
| Conread position: | 12-243 |
| Cow position: | chr1:55275540-55275304 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 15, 20 |
| Conread position: | 12-252 |
| Cow position: | chr1:82922668-82922427 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 22, 205 |
| Conread position: | 12-261 |
| Cow position: | chr1:56192673-56192417 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 13-261 |
| Cow position: | chr1:5503458-5503711 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 14-176 |
| Cow position: | chr1:27187790-27187954 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 14-255 |
| Cow position: | chr1:3933764-3933520 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 48, 17 |
| Conread position: | 14-255 |
| Cow position: | chr1:9259978-9260224 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 46, 17 |
| Conread position: | 15-213 |
| Cow position: | chr1:53365037-53365234 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 13, 64 |
| Conread position: | 15-223 |
| Cow position: | chr1:33351066-33351276 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 47, 27 |
| Conread position: | 15-239 |
| Cow position: | chr1:8826548-8826777 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 47, 16 |
| Conread position: | 15-255 |
| Cow position: | chr1:82654151-82654396 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 45, 16 |
| Conread position: | 15-261 |
| Cow position: | chr1:76619985-76619732 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 16 |
| Conread position: | 16-255 |
| Cow position: | chr1:86508418-86508156 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 21, 217 |
| Conread position: | 16-259 |
| Cow position: | chr1:22619176-22618928 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 21 |
| Conread position: | 16-261 |
| Cow position: | chr1:49972679-49972426 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 16-261 |
| Cow position: | chr1:65387806-65388059 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 17-261 |
| Cow position: | chr1:56142848-56142596 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 45, 14 |
| Conread position: | 20-261 |
| Cow position: | chr1:30533525-30533275 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 21-239 |
| Cow position: | chr1:29039529-29039756 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 38, 199 |
| Conread position: | 21-243 |
| Cow position: | chr1:11859266-11859036 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 17, 197 |
| Conread position: | 21-255 |
| Cow position: | chr1:72082257-72082495 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 41, 10 |
| Conread position: | 23-252 |
| Cow position: | chr1:57658398-57658629 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 36-239 |
| Cow position: | chr1:101794789-101794984 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 26, 42 |
| Conread position: | 36-255 |
| Cow position: | chr1:29035814-29036035 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 24, 120 |
| Conread position: | 36-255 |
| Cow position: | chr1:89769024-89768802 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 26, 178 |
| Conread position: | 36-258 |
| Cow position: | chr1:79635478-79635255 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 26, 78 |
| Conread position: | 36-259 |
| Cow position: | chr1:81862467-81862241 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 178 |
| Conread position: | 36-260 |
| Cow position: | chr1:38417648-38417869 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 24, 73 |
| Conread position: | 36-261 |
| Cow position: | chr1:98786453-98786682 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 36-264 |
| Cow position: | chr1:33713585-33713831 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 24, 161 |
| Conread position: | 41-264 |
| Cow position: | chr1:73020405-73020185 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 81, 13 |
| Conread position: | 42-255 |
| Cow position: | chr1:102780809-102780601 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 199, 18 |
| Conread position: | 44-239 |
| Cow position: | chr1:22345526-22345721 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 65, 141 |
| Conread position: | 44-245 |
| Cow position: | chr1:72112529-72112737 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 165 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 18, 179 |
| Conread position: | 50-226 |
| Cow position: | chr1:65021270-65021094 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 58, 160 |
| Conread position: | 54-255 |
| Cow position: | chr1:18240686-18240494 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 56, 31 |
| Conread position: | 58-252 |
| Cow position: | chr1:38386891-38386700 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 156 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 52, 8 |
| Conread position: | 58-259 |
| Cow position: | chr1:1828768-1828565 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 53, 158 |
| Conread position: | 60-261 |
| Cow position: | chr1:3384396-3384193 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 49, 157 |
| Conread position: | 60-262 |
| Cow position: | chr1:40966873-40966669 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 50, 157 |
| Conread position: | 70-252 |
| Cow position: | chr1:26813518-26813337 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 39, 112 |
| Conread position: | 70-259 |
| Cow position: | chr1:29412645-29412454 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 39, 141 |
| Conread position: | 83-255 |
| Cow position: | chr1:62921126-62921298 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 28, 128 |
| Conread position: | 87-228 |
| Cow position: | chr1:102550075-102550216 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 124 |
| Conread position: | 87-259 |
| Cow position: | chr1:45003771-45003939 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 124 |
| Conread position: | 95-259 |
| Cow position: | chr1:82911250-82911084 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 115 |
| Conread position: | 98-261 |
| Cow position: | chr1:58338422-58338587 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 11, 118 |
| Conread position: | 100-252 |
| Cow position: | chr1:89482534-89482687 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 10, 111 |
| Conread position: | 108-252 |
| Cow position: | chr1:72037957-72037816 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 116-252 |
| Cow position: | chr1:98617189-98617053 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 7, 100 |
| Conread position: | 117-255 |
| Cow position: | chr1:101012582-101012445 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 129-264 |
| Cow position: | chr1:87435860-87435996 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 114, 81 |
Show alignments to all cow chromosomes.