Cow genome map

Conread name: rcut36_b11.y1

Conread position: 1-259
Cow position:
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 23

Conread position: 2-252
Cow position:
Alignm length: 252
Alignm identity: 176
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 107, 29

Conread position: 3-248
Cow position:
Alignm length: 248
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 48

Conread position: 3-261
Cow position:
Alignm length: 263
Alignm identity: 195
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 19, 5

Conread position: 4-240
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 4-261
Cow position:
Alignm length: 267
Alignm identity: 197
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 58, 27

Conread position: 6-205
Cow position:
Alignm length: 204
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 94

Conread position: 7-229
Cow position:
Alignm length: 227
Alignm identity: 175
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 54, 14

Conread position: 7-242
Cow position:
Alignm length: 244
Alignm identity: 187
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 53, 16

Conread position: 7-252
Cow position:
Alignm length: 248
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 133

Conread position: 7-255
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 14

Conread position: 7-255
Cow position:
Alignm length: 256
Alignm identity: 194
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 53, 14

Conread position: 7-255
Cow position:
Alignm length: 256
Alignm identity: 193
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 53, 16

Conread position: 7-255
Cow position:
Alignm length: 256
Alignm identity: 184
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 53, 14

Conread position: 7-255
Cow position:
Alignm length: 254
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 16

Conread position: 7-255
Cow position:
Alignm length: 251
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 16

Conread position: 7-255
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 35, 211

Conread position: 7-255
Cow position:
Alignm length: 250
Alignm identity: 180
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 102, 209

Conread position: 7-259
Cow position:
Alignm length: 262
Alignm identity: 198
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 55, 14

Conread position: 7-261
Cow position:
Alignm length: 264
Alignm identity: 194
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 55, 26

Conread position: 8-252
Cow position:
Alignm length: 247
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 43

Conread position: 9-210
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 9-242
Cow position:
Alignm length: 241
Alignm identity: 180
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 53, 190

Conread position: 9-255
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 119

Conread position: 9-261
Cow position:
Alignm length: 261
Alignm identity: 193
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 53, 22

Conread position: 9-261
Cow position:
Alignm length: 257
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 27

Conread position: 10-202
Cow position:
Alignm length: 200
Alignm identity: 155
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 52, 11

Conread position: 10-255
Cow position:
Alignm length: 250
Alignm identity: 177
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 52, 26

Conread position: 10-259
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 11

Conread position: 10-261
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 10, 40

Conread position: 10-261
Cow position:
Alignm length: 261
Alignm identity: 190
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 52, 23

Conread position: 10-261
Cow position:
Alignm length: 260
Alignm identity: 193
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 52, 21

Conread position: 11-233
Cow position:
Alignm length: 228
Alignm identity: 167
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 44, 20

Conread position: 11-252
Cow position:
Alignm length: 250
Alignm identity: 185
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 52, 10

Conread position: 11-252
Cow position:
Alignm length: 249
Alignm identity: 184
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 49, 20

Conread position: 11-261
Cow position:
Alignm length: 258
Alignm identity: 186
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 51, 20

Conread position: 11-261
Cow position:
Alignm length: 257
Alignm identity: 189
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 51, 20

Conread position: 11-261
Cow position:
Alignm length: 260
Alignm identity: 191
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 51, 20

Conread position: 11-261
Cow position:
Alignm length: 260
Alignm identity: 193
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 51, 20

Conread position: 12-205
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 50, 14

Conread position: 12-261
Cow position:
Alignm length: 259
Alignm identity: 188
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 50, 19

Conread position: 12-261
Cow position:
Alignm length: 261
Alignm identity: 193
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 49, 19

Conread position: 12-262
Cow position:
Alignm length: 261
Alignm identity: 191
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 11, 20

Conread position: 13-259
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 50, 23

Conread position: 14-252
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 48, 17

Conread position: 19-238
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 15, 196

Conread position: 19-261
Cow position:
Alignm length: 248
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 80

Conread position: 20-259
Cow position:
Alignm length: 245
Alignm identity: 186
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 35, 16

Conread position: 20-259
Cow position:
Alignm length: 244
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 43

Conread position: 20-261
Cow position:
Alignm length: 248
Alignm identity: 186
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 42, 11

Conread position: 21-259
Cow position:
Alignm length: 249
Alignm identity: 167
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 198

Conread position: 21-259
Cow position:
Alignm length: 248
Alignm identity: 190
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 41, 93

Conread position: 36-226
Cow position:
Alignm length: 192
Alignm identity: 152
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 75, 175

Conread position: 36-233
Cow position:
Alignm length: 204
Alignm identity: 159
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 23, 87

Conread position: 36-243
Cow position:
Alignm length: 215
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 23, 180

Conread position: 36-252
Cow position:
Alignm length: 219
Alignm identity: 166
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 76, 34

Conread position: 36-256
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 112

Conread position: 36-257
Cow position:
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 133

Conread position: 36-257
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 21, 64

Conread position: 41-213
Cow position:
Alignm length: 177
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 47

Conread position: 41-243
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 69, 169

Conread position: 43-228
Cow position:
Alignm length: 187
Alignm identity: 148
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 66, 17

Conread position: 43-259
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 11

Conread position: 45-259
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 67, 40

Conread position: 50-259
Cow position:
Alignm length: 213
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 58, 160

Conread position: 71-264
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 38, 30

Conread position: 90-243
Cow position:
Alignm length: 155
Alignm identity: 122
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 120

Conread position: 99-252
Cow position:
Alignm length: 155
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 10, 119

Conread position: 106-252
Cow position:
Alignm length: 147
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 110, 0

Show alignments to all cow chromosomes.