Cow genome map
| Conread name: | rcut36_b11.y1 |
| Conread position: | 3-255 |
| Cow position: | chr18:54004640-54004399 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 106, 39 |
| Conread position: | 7-210 |
| Cow position: | chr18:41839274-41839079 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 15, 39 |
| Conread position: | 7-243 |
| Cow position: | chr18:24617669-24617902 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 101, 16 |
| Conread position: | 7-252 |
| Cow position: | chr18:19353898-19354145 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 7-252 |
| Cow position: | chr18:51695233-51695479 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 7-255 |
| Cow position: | chr18:27538394-27538644 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 7-256 |
| Cow position: | chr18:26245091-26244840 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 7-262 |
| Cow position: | chr18:5534542-5534796 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 13, 133 |
| Conread position: | 9-261 |
| Cow position: | chr18:27988719-27988975 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 10-261 |
| Cow position: | chr18:51343218-51343472 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 12, 201 |
| Conread position: | 11-239 |
| Cow position: | chr18:19485675-19485908 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 56, 25 |
| Conread position: | 11-255 |
| Cow position: | chr18:29865078-29864829 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 11-259 |
| Cow position: | chr18:51461514-51461263 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 11, 200 |
| Conread position: | 11-261 |
| Cow position: | chr18:16089652-16089909 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 11-261 |
| Cow position: | chr18:23799182-23799433 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 13-210 |
| Cow position: | chr18:18852129-18852329 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 80 |
| Conread position: | 14-243 |
| Cow position: | chr18:25352796-25353028 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 48, 10 |
| Conread position: | 14-261 |
| Cow position: | chr18:16175082-16174831 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 48, 17 |
| Conread position: | 16-261 |
| Cow position: | chr18:51482391-51482643 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 12, 87 |
| Conread position: | 20-255 |
| Cow position: | chr18:14417508-14417748 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 21-243 |
| Cow position: | chr18:16392563-16392344 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 71, 33 |
| Conread position: | 21-261 |
| Cow position: | chr18:25921931-25922180 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 17, 202 |
| Conread position: | 36-261 |
| Cow position: | chr18:14131947-14132179 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 26, 119 |
| Conread position: | 36-294 |
| Cow position: | chr18:33752254-33752518 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 155 |
| Conread position: | 41-261 |
| Cow position: | chr18:29238459-29238675 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 110, 59 |
| Conread position: | 43-228 |
| Cow position: | chr18:25364737-25364921 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 66, 18 |
| Conread position: | 43-258 |
| Cow position: | chr18:35054699-35054910 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 66, 17 |
| Conread position: | 63-252 |
| Cow position: | chr18:40482586-40482775 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 46, 153 |
| Conread position: | 84-252 |
| Cow position: | chr18:32166313-32166145 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 24, 126 |
| Conread position: | 84-259 |
| Cow position: | chr18:11273247-11273071 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 25, 126 |
| Conread position: | 106-261 |
| Cow position: | chr18:52654449-52654604 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 148, 109 |
Show alignments to all cow chromosomes.