Cow genome map
| Conread name: | rcut36_b11.y1 |
| Conread position: | 1-259 |
| Cow position: | chr19:3139500-3139762 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 19, 74 |
| Conread position: | 3-264 |
| Cow position: | chr19:342764-343046 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 19, 226 |
| Conread position: | 4-261 |
| Cow position: | chr19:4387140-4387395 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 77, 27 |
| Conread position: | 4-261 |
| Cow position: | chr19:5730383-5730638 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 105, 27 |
| Conread position: | 4-262 |
| Cow position: | chr19:33943095-33943362 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 22, 29 |
| Conread position: | 7-242 |
| Cow position: | chr19:39833-40068 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 13, 190 |
| Conread position: | 7-242 |
| Cow position: | chr19:1583788-1584025 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 186 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 55, 14 |
| Conread position: | 7-243 |
| Cow position: | chr19:16319093-16318855 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 7-252 |
| Cow position: | chr19:774140-774387 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 7-252 |
| Cow position: | chr19:39667006-39666765 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 7-255 |
| Cow position: | chr19:166592-166344 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 57, 16 |
| Conread position: | 7-255 |
| Cow position: | chr19:28595072-28595323 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 79 |
| Conread position: | 7-257 |
| Cow position: | chr19:173794-174049 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 55, 29 |
| Conread position: | 7-258 |
| Cow position: | chr19:376176-375936 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 7-259 |
| Cow position: | chr19:5899973-5899718 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 197 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 10-259 |
| Cow position: | chr19:52150142-52149890 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 12, 42 |
| Conread position: | 10-261 |
| Cow position: | chr19:40850922-40850674 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 61, 23 |
| Conread position: | 11-181 |
| Cow position: | chr19:40815968-40815798 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 99, 12 |
| Conread position: | 11-233 |
| Cow position: | chr19:32210538-32210308 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 11-255 |
| Cow position: | chr19:437902-437653 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 11-261 |
| Cow position: | chr19:892099-891845 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 190 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 11-261 |
| Cow position: | chr19:39184008-39183750 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 46, 20 |
| Conread position: | 12-255 |
| Cow position: | chr19:7343607-7343853 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 16-261 |
| Cow position: | chr19:33874952-33875205 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 19-252 |
| Cow position: | chr19:40886195-40885959 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 20-244 |
| Cow position: | chr19:28580129-28579898 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 20-252 |
| Cow position: | chr19:206051-206290 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 15, 206 |
| Conread position: | 20-252 |
| Cow position: | chr19:39392057-39392292 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 20-261 |
| Cow position: | chr19:2272570-2272322 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 21-204 |
| Cow position: | chr19:27036088-27035909 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 24 |
| Conread position: | 23-243 |
| Cow position: | chr19:20106275-20106500 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 37, 8 |
| Conread position: | 24-197 |
| Cow position: | chr19:50724096-50724273 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 13, 81 |
| Conread position: | 37-252 |
| Cow position: | chr19:1587675-1587454 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 102 |
| Conread position: | 75-259 |
| Cow position: | chr19:265260-265444 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 149 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 35, 135 |
| Conread position: | 80-215 |
| Cow position: | chr19:3174995-3175131 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 132-259 |
| Cow position: | chr19:256951-257077 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 112, 78 |
Show alignments to all cow chromosomes.