Cow genome map


           Conread name:
           rcut36_b11.y1
        

               Conread position:
               1-251
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               7, 36
               

               Conread position:
               1-251
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               61, 35
               

               Conread position:
               1-259
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               1-261
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               2-254
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 36
               

               Conread position:
               2-258
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               13, 38
               

               Conread position:
               3-256
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 40
               

               Conread position:
               3-261
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               106, 28
               

               Conread position:
               3-261
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               106, 28
               

               Conread position:
               4-261
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               12, 194
               

               Conread position:
               4-261
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               58, 27
               

               Conread position:
               4-261
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               58, 27
               

               Conread position:
               4-261
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               58, 27
               

               Conread position:
               6-239
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               56, 14
               

               Conread position:
               6-252
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               54, 15
               

               Conread position:
               7-232
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               56, 29
               

               Conread position:
               7-241
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               14, 205
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               181
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               23, 205
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               101, 27
               

               Conread position:
               7-252
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               7-252
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               30, 205
               

               Conread position:
               7-255
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-255
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               37, 54
               

               Conread position:
               7-255
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               7-258
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               196
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               7-258
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               55, 107
               

               Conread position:
               7-259
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               56, 16
               

               Conread position:
               7-259
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-259
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               7-260
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               35, 206
               

               Conread position:
               7-261
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               197
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               7-261
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               7-262
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               102, 17
               

               Conread position:
               8-151
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 19
               

               Conread position:
               8-159
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               8-186
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               8-204
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               104, 23
               

               Conread position:
               8-261
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               101, 210
               

               Conread position:
               9-252
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               53, 24
               

               Conread position:
               9-254
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 72
               

               Conread position:
               9-259
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               51, 21
               

               Conread position:
               9-261
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               100, 83
               

               Conread position:
               9-261
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               53, 24
               

               Conread position:
               9-261
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               100, 207
               

               Conread position:
               10-214
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               102, 28
               

               Conread position:
               10-239
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               12, 201
               

               Conread position:
               10-252
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               12, 35
               

               Conread position:
               10-252
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               10-259
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               51, 143
               

               Conread position:
               10-259
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               10-261
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               10-262
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               11-179
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               11-242
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               49, 20
               

               Conread position:
               11-243
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               11, 181
               

               Conread position:
               11-260
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               43, 20
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               44, 25
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               12-205
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               12-243
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               12-255
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               51, 19
               

               Conread position:
               13-252
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               47, 20
               

               Conread position:
               13-255
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               48, 20
               

               Conread position:
               13-255
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               47, 28
               

               Conread position:
               13-261
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               48, 20
               

               Conread position:
               13-261
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               49, 16
               

               Conread position:
               14-232
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               54, 22
               

               Conread position:
               14-259
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               21, 218
               

               Conread position:
               14-261
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               48, 17
               

               Conread position:
               15-255
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               190
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               46, 19
               

               Conread position:
               15-259
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               46, 85
               

               Conread position:
               16-225
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               16, 207
               

               Conread position:
               16-240
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               176
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               94, 21
               

               Conread position:
               16-258
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               16-260
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               12, 82
               

               Conread position:
               16-262
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               22, 8
               

               Conread position:
               18-243
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               19, 198
               

               Conread position:
               18-259
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 199
               

               Conread position:
               20-252
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 110
               

               Conread position:
               20-259
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               39, 16
               

               Conread position:
               20-261
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               21-257
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               36, 112
               

               Conread position:
               21-259
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               13, 207
               

               Conread position:
               33-259
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               75, 9
               

               Conread position:
               34-252
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 178
               

               Conread position:
               36-259
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               182
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               24, 181
               

               Conread position:
               37-255
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               25, 180
               

               Conread position:
               39-252
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               41-255
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               69, 98
               

               Conread position:
               41-259
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               69, 24
               

               Conread position:
               43-210
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               66, 17
               

               Conread position:
               43-255
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               65, 7
               

               Conread position:
               48-233
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               7, 95
               

               Conread position:
               50-185
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               59, 46
               

               Conread position:
               83-255
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 128
               

               Conread position:
               98-252
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               11, 112
               

               Conread position:
               103-259
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               109, 88
               

               Conread position:
               103-263
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               5, 107
               

               Conread position:
               110-261
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               130-243
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               86, 0
               
Show alignments to all cow chromosomes.