Cow genome map

Conread name: rcut36_b11.y1

Conread position: 4-261
Cow position: chr20:29950018-29950280 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 198
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 58, 29

Conread position: 7-243
Cow position: chr20:20441454-20441216 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 53, 14

Conread position: 7-243
Cow position: chr20:26054193-26053955 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 16

Conread position: 7-243
Cow position: chr20:30429768-30430007 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 53, 16

Conread position: 7-255
Cow position: chr20:19439413-19439663 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 53, 14

Conread position: 7-255
Cow position: chr20:21717923-21718181 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 53, 16

Conread position: 7-257
Cow position: chr20:12436924-12436669 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 55, 26

Conread position: 7-259
Cow position: chr20:8972680-8972425 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 52, 14

Conread position: 7-259
Cow position: chr20:9547145-9547399 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 55

Conread position: 7-259
Cow position: chr20:24615405-24615158 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 14

Conread position: 7-273
Cow position: chr20:30386582-30386314 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 170
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 53, 16

Conread position: 9-259
Cow position: chr20:824268-824520 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 99, 201

Conread position: 11-210
Cow position: chr20:12570001-12570211 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 20

Conread position: 11-252
Cow position: chr20:5536442-5536688 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 185
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 20

Conread position: 11-261
Cow position: chr20:13764393-13764650 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 51, 20

Conread position: 11-261
Cow position: chr20:15293480-15293733 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 49, 20

Conread position: 11-261
Cow position: chr20:21916135-21916392 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 20

Conread position: 11-261
Cow position: chr20:30687074-30687340 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 20

Conread position: 12-255
Cow position: chr20:27870706-27870955 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 11, 20

Conread position: 12-259
Cow position: chr20:9344453-9344703 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 193

Conread position: 12-261
Cow position: chr20:28162323-28162580 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 194
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 11, 20

Conread position: 12-262
Cow position: chr20:17660243-17659991 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 46, 19

Conread position: 14-257
Cow position: chr20:13793531-13793777 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 95, 22

Conread position: 17-255
Cow position: chr20:25849323-25849083 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 45, 7

Conread position: 21-243
Cow position: chr20:21395421-21395646 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 17, 51

Conread position: 22-261
Cow position: chr20:23468157-23467913 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 188
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 9

Conread position: 36-146
Cow position: chr20:19356286-19356397 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 36-258
Cow position: chr20:15066974-15067204 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 185

Conread position: 41-242
Cow position: chr20:13678310-13678109 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 70, 170

Conread position: 43-259
Cow position: chr20:12041959-12042175 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 68, 84

Conread position: 45-255
Cow position: chr20:25899224-25899435 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 164
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 19, 166

Conread position: 61-259
Cow position: chr20:10101464-10101269 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 35

Conread position: 67-264
Cow position: chr20:19341386-19341584 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 157
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 42, 102

Conread position: 86-259
Cow position: chr20:19214557-19214732 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 24, 125

Show alignments to all cow chromosomes.