Cow genome map
| Conread name: | rcut36_b11.y1 |
| Conread position: | 3-255 |
| Cow position: | chr25:11041828-11042083 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 59, 33 |
| Conread position: | 7-233 |
| Cow position: | chr25:20773885-20773653 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 7-243 |
| Cow position: | chr25:13693182-13692944 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 186 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 7-243 |
| Cow position: | chr25:32581008-32581246 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 7-255 |
| Cow position: | chr25:13062224-13061974 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 7-255 |
| Cow position: | chr25:19339113-19338864 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 7-255 |
| Cow position: | chr25:19922030-19922276 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 57, 16 |
| Conread position: | 7-255 |
| Cow position: | chr25:20346497-20346247 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 8-255 |
| Cow position: | chr25:20097910-20098154 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 51, 26 |
| Conread position: | 8-255 |
| Cow position: | chr25:25508196-25508443 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 101, 208 |
| Conread position: | 8-261 |
| Cow position: | chr25:16924916-16924659 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 25 |
| Conread position: | 9-255 |
| Cow position: | chr25:12941184-12940937 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 53, 24 |
| Conread position: | 9-255 |
| Cow position: | chr25:13782534-13782783 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 53, 24 |
| Conread position: | 10-163 |
| Cow position: | chr25:18192270-18192115 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 12, 99 |
| Conread position: | 10-252 |
| Cow position: | chr25:18305628-18305870 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 11-239 |
| Cow position: | chr25:22149028-22149261 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 11-251 |
| Cow position: | chr25:18273295-18273053 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 45, 165 |
| Conread position: | 11-259 |
| Cow position: | chr25:18486075-18485825 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 11-259 |
| Cow position: | chr25:18888257-18888002 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 11-261 |
| Cow position: | chr25:20631111-20631368 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 11-262 |
| Cow position: | chr25:34345509-34345259 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 48, 20 |
| Conread position: | 12-239 |
| Cow position: | chr25:11931304-11931075 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 15-255 |
| Cow position: | chr25:27021105-27020862 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 45, 16 |
| Conread position: | 16-255 |
| Cow position: | chr25:17588075-17587832 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 36-259 |
| Cow position: | chr25:33575424-33575198 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 24, 176 |
| Conread position: | 36-288 |
| Cow position: | chr25:17559054-17558793 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 180 |
| Conread position: | 43-252 |
| Cow position: | chr25:34238699-34238495 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 18 |
| Conread position: | 44-233 |
| Cow position: | chr25:12757597-12757407 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 65, 166 |
| Conread position: | 58-259 |
| Cow position: | chr25:35627905-35627706 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 53, 30 |
Show alignments to all cow chromosomes.