Cow genome map
| Conread name: | rcut36_b11.y1 | 
| Conread position: | 1-257 | 
| Cow position: | chr3:48229152-48228899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 109, 28 | 
| Conread position: | 2-261 | 
| Cow position: | chr3:53516964-53517230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 29 | 
| Conread position: | 3-243 | 
| Cow position: | chr3:56295540-56295786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 57, 213 | 
| Conread position: | 4-259 | 
| Cow position: | chr3:20382392-20382654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 23, 28 | 
| Conread position: | 4-261 | 
| Cow position: | chr3:72631421-72631677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 58, 15 | 
| Conread position: | 4-261 | 
| Cow position: | chr3:78026058-78025800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 81, 27 | 
| Conread position: | 4-273 | 
| Cow position: | chr3:21258153-21257885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 17, 31 | 
| Conread position: | 6-261 | 
| Cow position: | chr3:19880012-19880265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 102, 36 | 
| Conread position: | 7-183 | 
| Cow position: | chr3:30330757-30330578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 53, 16 | 
| Conread position: | 7-241 | 
| Cow position: | chr3:47080047-47079811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 53, 14 | 
| Conread position: | 7-243 | 
| Cow position: | chr3:4287452-4287687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 53, 16 | 
| Conread position: | 7-243 | 
| Cow position: | chr3:74058889-74059126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 53, 16 | 
| Conread position: | 7-252 | 
| Cow position: | chr3:32621679-32621433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 53, 16 | 
| Conread position: | 7-255 | 
| Cow position: | chr3:2870151-2870401 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 53, 14 | 
| Conread position: | 7-255 | 
| Cow position: | chr3:6783730-6783981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 14 | 
| Conread position: | 7-255 | 
| Cow position: | chr3:44925425-44925675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 53, 14 | 
| Conread position: | 7-255 | 
| Cow position: | chr3:68872392-68872142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 53, 16 | 
| Conread position: | 7-259 | 
| Cow position: | chr3:2918832-2919083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 53, 16 | 
| Conread position: | 7-259 | 
| Cow position: | chr3:3840154-3839899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 55, 14 | 
| Conread position: | 7-259 | 
| Cow position: | chr3:7157357-7157100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 53, 14 | 
| Conread position: | 7-259 | 
| Cow position: | chr3:31416379-31416635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 14 | 
| Conread position: | 7-261 | 
| Cow position: | chr3:18812861-18813121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 55, 14 | 
| Conread position: | 7-261 | 
| Cow position: | chr3:34029561-34029299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 55, 24 | 
| Conread position: | 8-207 | 
| Cow position: | chr3:65208546-65208751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 63, 28 | 
| Conread position: | 8-255 | 
| Cow position: | chr3:64026771-64026525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 52, 13 | 
| Conread position: | 8-259 | 
| Cow position: | chr3:2854082-2853833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 54, 15 | 
| Conread position: | 9-255 | 
| Cow position: | chr3:40824756-40825004 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 53, 24 | 
| Conread position: | 9-261 | 
| Cow position: | chr3:2709500-2709249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 18, 35 | 
| Conread position: | 9-261 | 
| Cow position: | chr3:7478551-7478294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 53, 20 | 
| Conread position: | 9-261 | 
| Cow position: | chr3:30315912-30316167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 65, 20 | 
| Conread position: | 9-261 | 
| Cow position: | chr3:42448480-42448736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 54, 14 | 
| Conread position: | 10-241 | 
| Cow position: | chr3:7247900-7248131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 50, 11 | 
| Conread position: | 10-243 | 
| Cow position: | chr3:18860784-18861018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 12, 201 | 
| Conread position: | 10-243 | 
| Cow position: | chr3:68698606-68698374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 44, 201 | 
| Conread position: | 10-252 | 
| Cow position: | chr3:37970413-37970656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 12, 207 | 
| Conread position: | 10-252 | 
| Cow position: | chr3:56327472-56327717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 50, 23 | 
| Conread position: | 10-255 | 
| Cow position: | chr3:18462466-18462233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 100, 19 | 
| Conread position: | 10-255 | 
| Cow position: | chr3:40338781-40338535 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 12, 42 | 
| Conread position: | 10-255 | 
| Cow position: | chr3:56146670-56146917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 12, 52 | 
| Conread position: | 10-259 | 
| Cow position: | chr3:46859922-46859675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 16, 34 | 
| Conread position: | 10-261 | 
| Cow position: | chr3:45975874-45976120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 155, 19 | 
| Conread position: | 11-205 | 
| Cow position: | chr3:33843465-33843266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 19, 73 | 
| Conread position: | 11-220 | 
| Cow position: | chr3:51938735-51938525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 31, 25 | 
| Conread position: | 11-255 | 
| Cow position: | chr3:30617556-30617311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 49, 20 | 
| Conread position: | 11-259 | 
| Cow position: | chr3:27864541-27864792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 51, 25 | 
| Conread position: | 11-261 | 
| Cow position: | chr3:23288970-23288712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 51, 20 | 
| Conread position: | 11-261 | 
| Cow position: | chr3:49136201-49135944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 49, 20 | 
| Conread position: | 11-261 | 
| Cow position: | chr3:69932470-69932213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 51, 20 | 
| Conread position: | 12-243 | 
| Cow position: | chr3:1742695-1742932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 48, 204 | 
| Conread position: | 12-243 | 
| Cow position: | chr3:2367973-2367738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 48, 119 | 
| Conread position: | 12-243 | 
| Cow position: | chr3:41209238-41209002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 48, 204 | 
| Conread position: | 12-255 | 
| Cow position: | chr3:45034103-45034352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 15, 20 | 
| Conread position: | 12-259 | 
| Cow position: | chr3:19799808-19799560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 96, 19 | 
| Conread position: | 12-259 | 
| Cow position: | chr3:63240881-63240625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 206 | 
| Conread position: | 12-259 | 
| Cow position: | chr3:64356602-64356347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 40, 100 | 
| Conread position: | 12-261 | 
| Cow position: | chr3:5993716-5993467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 50, 19 | 
| Conread position: | 13-261 | 
| Cow position: | chr3:66621564-66621817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 49, 20 | 
| Conread position: | 14-242 | 
| Cow position: | chr3:34090116-34089889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 45, 23 | 
| Conread position: | 14-261 | 
| Cow position: | chr3:36877285-36877039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 95, 17 | 
| Conread position: | 16-241 | 
| Cow position: | chr3:3524379-3524610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 7, 16 | 
| Conread position: | 16-252 | 
| Cow position: | chr3:47087660-47087886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 26, 19 | 
| Conread position: | 16-254 | 
| Cow position: | chr3:15054337-15054091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 94, 8 | 
| Conread position: | 16-259 | 
| Cow position: | chr3:58948901-58949147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 197 | 
| Conread position: | 16-261 | 
| Cow position: | chr3:5952819-5952566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 11, 21 | 
| Conread position: | 16-261 | 
| Cow position: | chr3:21181329-21181077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 46, 15 | 
| Conread position: | 19-243 | 
| Cow position: | chr3:34505978-34505752 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 31, 193 | 
| Conread position: | 20-252 | 
| Cow position: | chr3:57483353-57483116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 42, 11 | 
| Conread position: | 21-252 | 
| Cow position: | chr3:56100318-56100079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 14, 197 | 
| Conread position: | 22-254 | 
| Cow position: | chr3:5884903-5885140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 40, 8 | 
| Conread position: | 23-243 | 
| Cow position: | chr3:29329914-29329689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 36, 8 | 
| Conread position: | 23-243 | 
| Cow position: | chr3:29575748-29575523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 39, 8 | 
| Conread position: | 23-243 | 
| Cow position: | chr3:36863082-36862857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 37, 8 | 
| Conread position: | 24-233 | 
| Cow position: | chr3:46017424-46017623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 14, 83 | 
| Conread position: | 32-281 | 
| Cow position: | chr3:2906370-2906115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 57, 9 | 
| Conread position: | 36-255 | 
| Cow position: | chr3:32200405-32200629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 25, 47 | 
| Conread position: | 36-255 | 
| Cow position: | chr3:51364401-51364176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 24, 180 | 
| Conread position: | 36-255 | 
| Cow position: | chr3:68891182-68890958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 24, 179 | 
| Conread position: | 36-257 | 
| Cow position: | chr3:33634639-33634864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 26, 94 | 
| Conread position: | 36-261 | 
| Cow position: | chr3:24444712-24444480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 26, 60 | 
| Conread position: | 36-261 | 
| Cow position: | chr3:43191904-43191671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 26, 186 | 
| Conread position: | 37-259 | 
| Cow position: | chr3:77424992-77425210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 25, 67 | 
| Conread position: | 41-259 | 
| Cow position: | chr3:6687189-6687406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 200, 65 | 
| Conread position: | 43-221 | 
| Cow position: | chr3:63002160-63001981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 68, 17 | 
| Conread position: | 43-226 | 
| Cow position: | chr3:27919829-27920011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 66, 7 | 
| Conread position: | 43-255 | 
| Cow position: | chr3:19945646-19945862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 64, 171 | 
| Conread position: | 43-261 | 
| Cow position: | chr3:49543809-49543591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 66, 18 | 
| Conread position: | 44-259 | 
| Cow position: | chr3:6876778-6876569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 66, 17 | 
| Conread position: | 48-261 | 
| Cow position: | chr3:67769214-67769428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 14, 81 | 
| Conread position: | 50-259 | 
| Cow position: | chr3:51857283-51857072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 58, 160 | 
| Conread position: | 64-252 | 
| Cow position: | chr3:56338851-56338662 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 45, 153 | 
| Conread position: | 83-252 | 
| Cow position: | chr3:19940371-19940537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 25, 108 | 
| Conread position: | 86-259 | 
| Cow position: | chr3:15188253-15188428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 23, 125 | 
| Conread position: | 90-261 | 
| Cow position: | chr3:74851701-74851528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 19, 119 | 
| Conread position: | 107-255 | 
| Cow position: | chr3:58784690-58784543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 102, 0 | 
| Conread position: | 107-261 | 
| Cow position: | chr3:10242119-10242274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 136, 108 | 
| Conread position: | 111-262 | 
| Cow position: | chr3:4029202-4029354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 132, 98 | 
| Conread position: | 115-252 | 
| Cow position: | chr3:38868061-38868197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 117-252 | 
| Cow position: | chr3:29580085-29580220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 128, 93 | 
Show alignments to all cow chromosomes.
