Cow genome map


           Conread name:
           rcut36_b11.y1
        

               Conread position:
               1-257
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               109, 28
               

               Conread position:
               2-261
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 29
               

               Conread position:
               3-243
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               57, 213
               

               Conread position:
               4-259
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               23, 28
               

               Conread position:
               4-261
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               58, 15
               

               Conread position:
               4-261
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               81, 27
               

               Conread position:
               4-273
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               17, 31
               

               Conread position:
               6-261
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               102, 36
               

               Conread position:
               7-183
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-241
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               186
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-252
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-255
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               7-255
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               7-255
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               7-255
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-259
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-259
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               7-259
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               7-259
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 14
               

               Conread position:
               7-261
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               7-261
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               55, 24
               

               Conread position:
               8-207
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               63, 28
               

               Conread position:
               8-255
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               8-259
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               54, 15
               

               Conread position:
               9-255
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               53, 24
               

               Conread position:
               9-261
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               18, 35
               

               Conread position:
               9-261
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               53, 20
               

               Conread position:
               9-261
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               65, 20
               

               Conread position:
               9-261
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               54, 14
               

               Conread position:
               10-241
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               10-243
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               12, 201
               

               Conread position:
               10-243
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               44, 201
               

               Conread position:
               10-252
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               12, 207
               

               Conread position:
               10-252
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               50, 23
               

               Conread position:
               10-255
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               100, 19
               

               Conread position:
               10-255
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               12, 42
               

               Conread position:
               10-255
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               12, 52
               

               Conread position:
               10-259
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               16, 34
               

               Conread position:
               10-261
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               155, 19
               

               Conread position:
               11-205
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 73
               

               Conread position:
               11-220
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               11-255
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               49, 20
               

               Conread position:
               11-259
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               51, 25
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               49, 20
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               12-243
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               48, 204
               

               Conread position:
               12-243
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               48, 119
               

               Conread position:
               12-243
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               48, 204
               

               Conread position:
               12-255
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               12-259
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               96, 19
               

               Conread position:
               12-259
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 206
               

               Conread position:
               12-259
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               40, 100
               

               Conread position:
               12-261
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               50, 19
               

               Conread position:
               13-261
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               49, 20
               

               Conread position:
               14-242
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 23
               

               Conread position:
               14-261
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               95, 17
               

               Conread position:
               16-241
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               7, 16
               

               Conread position:
               16-252
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               26, 19
               

               Conread position:
               16-254
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               94, 8
               

               Conread position:
               16-259
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 197
               

               Conread position:
               16-261
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               16-261
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               46, 15
               

               Conread position:
               19-243
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               31, 193
               

               Conread position:
               20-252
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               42, 11
               

               Conread position:
               21-252
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               14, 197
               

               Conread position:
               22-254
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               40, 8
               

               Conread position:
               23-243
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               36, 8
               

               Conread position:
               23-243
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               39, 8
               

               Conread position:
               23-243
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               37, 8
               

               Conread position:
               24-233
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               14, 83
               

               Conread position:
               32-281
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               200
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               57, 9
               

               Conread position:
               36-255
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               25, 47
               

               Conread position:
               36-255
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               24, 180
               

               Conread position:
               36-255
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               24, 179
               

               Conread position:
               36-257
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               26, 94
               

               Conread position:
               36-261
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               26, 60
               

               Conread position:
               36-261
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               26, 186
               

               Conread position:
               37-259
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               25, 67
               

               Conread position:
               41-259
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 65
               

               Conread position:
               43-221
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               68, 17
               

               Conread position:
               43-226
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               66, 7
               

               Conread position:
               43-255
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               64, 171
               

               Conread position:
               43-261
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               66, 18
               

               Conread position:
               44-259
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               66, 17
               

               Conread position:
               48-261
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               14, 81
               

               Conread position:
               50-259
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               58, 160
               

               Conread position:
               64-252
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               45, 153
               

               Conread position:
               83-252
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               25, 108
               

               Conread position:
               86-259
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               23, 125
               

               Conread position:
               90-261
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               19, 119
               

               Conread position:
               107-255
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               107-261
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               136, 108
               

               Conread position:
               111-262
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               132, 98
               

               Conread position:
               115-252
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               117-252
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               128, 93
               
Show alignments to all cow chromosomes.