Cow genome map
Conread name: | rcut36_b11.y1 |
Conread position: | 1-242 |
Cow position: | chr4:99051-98815 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 174 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 107, 30 |
Conread position: | 4-243 |
Cow position: | chr4:33022478-33022233 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 178 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 56, 27 |
Conread position: | 4-254 |
Cow position: | chr4:26876623-26876373 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 185 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 58, 27 |
Conread position: | 4-261 |
Cow position: | chr4:33494715-33494979 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 195 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 58, 27 |
Conread position: | 7-210 |
Cow position: | chr4:51042120-51041920 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 148 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 13, 38 |
Conread position: | 7-242 |
Cow position: | chr4:41960066-41960302 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 184 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 53, 14 |
Conread position: | 7-243 |
Cow position: | chr4:5881325-5881559 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 178 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 55, 14 |
Conread position: | 7-243 |
Cow position: | chr4:9355545-9355783 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 16 |
Conread position: | 7-243 |
Cow position: | chr4:32213335-32213576 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 24 |
Conread position: | 7-243 |
Cow position: | chr4:65665228-65665008 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 179 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 53, 16 |
Conread position: | 7-252 |
Cow position: | chr4:27335097-27335349 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 189 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 53, 14 |
Conread position: | 7-255 |
Cow position: | chr4:17502165-17501915 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 195 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 53, 16 |
Conread position: | 7-255 |
Cow position: | chr4:17924798-17924545 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 181 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 56, 24 |
Conread position: | 7-255 |
Cow position: | chr4:42405778-42406031 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 182 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 55, 16 |
Conread position: | 7-258 |
Cow position: | chr4:60262990-60262746 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 187 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 105, 23 |
Conread position: | 7-259 |
Cow position: | chr4:5443659-5443403 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 193 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 53, 16 |
Conread position: | 7-259 |
Cow position: | chr4:17092696-17092442 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 193 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 52, 14 |
Conread position: | 7-259 |
Cow position: | chr4:41955929-41956185 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 195 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 53, 14 |
Conread position: | 7-261 |
Cow position: | chr4:25598322-25598062 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 195 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 55, 24 |
Conread position: | 7-264 |
Cow position: | chr4:16060445-16060705 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 196 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 52, 14 |
Conread position: | 7-276 |
Cow position: | chr4:20067557-20067288 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 196 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 31, 39 |
Conread position: | 8-252 |
Cow position: | chr4:20236231-20235986 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 181 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 22, 45 |
Conread position: | 8-264 |
Cow position: | chr4:16361085-16361348 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 23 |
Conread position: | 8-288 |
Cow position: | chr4:9847040-9846755 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 13 |
Conread position: | 9-164 |
Cow position: | chr4:45106633-45106792 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 129 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 51, 24 |
Conread position: | 9-243 |
Cow position: | chr4:3126980-3127215 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 176 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 13, 200 |
Conread position: | 9-243 |
Cow position: | chr4:30472380-30472617 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 182 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 51, 24 |
Conread position: | 9-255 |
Cow position: | chr4:160326-160573 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 182 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 13, 213 |
Conread position: | 9-255 |
Cow position: | chr4:1929468-1929226 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 184 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 99, 24 |
Conread position: | 9-259 |
Cow position: | chr4:11109908-11109654 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 196 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 26, 48 |
Conread position: | 9-261 |
Cow position: | chr4:43318468-43318212 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 198 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 53, 20 |
Conread position: | 10-243 |
Cow position: | chr4:18338024-18338258 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 173 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 12, 201 |
Conread position: | 10-252 |
Cow position: | chr4:33071663-33071430 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 180 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 34, 51 |
Conread position: | 11-180 |
Cow position: | chr4:27300346-27300175 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 140 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 96, 11 |
Conread position: | 11-253 |
Cow position: | chr4:36897543-36897789 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 181 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 51, 25 |
Conread position: | 11-255 |
Cow position: | chr4:1952400-1952151 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 183 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 51, 20 |
Conread position: | 11-255 |
Cow position: | chr4:6865340-6865092 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 189 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 49, 20 |
Conread position: | 11-255 |
Cow position: | chr4:67682364-67682613 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 183 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 51, 20 |
Conread position: | 11-257 |
Cow position: | chr4:16639777-16640028 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 20 |
Conread position: | 11-259 |
Cow position: | chr4:14819732-14819483 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 189 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 45, 25 |
Conread position: | 11-259 |
Cow position: | chr4:18423349-18423100 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 181 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 53, 20 |
Conread position: | 11-259 |
Cow position: | chr4:28832887-28833136 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 26 |
Conread position: | 11-261 |
Cow position: | chr4:57985159-57985415 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 188 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 51, 20 |
Conread position: | 11-262 |
Cow position: | chr4:34178075-34177827 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 25 |
Conread position: | 12-242 |
Cow position: | chr4:14386988-14387225 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 179 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 14-259 |
Cow position: | chr4:14755501-14755249 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 187 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 48, 22 |
Conread position: | 15-261 |
Cow position: | chr4:357080-357329 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 185 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 31, 16 |
Conread position: | 16-261 |
Cow position: | chr4:13494497-13494756 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 188 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 11, 16 |
Conread position: | 16-265 |
Cow position: | chr4:12240053-12239796 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 186 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 46, 206 |
Conread position: | 19-261 |
Cow position: | chr4:10882723-10882972 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 12 |
Conread position: | 20-255 |
Cow position: | chr4:12588504-12588743 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 184 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 42, 11 |
Conread position: | 21-259 |
Cow position: | chr4:8702739-8702975 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 169 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 55, 41 |
Conread position: | 22-261 |
Cow position: | chr4:3356755-3356509 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 188 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 39, 9 |
Conread position: | 24-261 |
Cow position: | chr4:43882285-43882528 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 185 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 38, 12 |
Conread position: | 27-243 |
Cow position: | chr4:530607-530822 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 164 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 33, 41 |
Conread position: | 36-224 |
Cow position: | chr4:54969907-54970091 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 144 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 34, 81 |
Conread position: | 36-252 |
Cow position: | chr4:6489175-6488954 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 169 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 26, 48 |
Conread position: | 36-252 |
Cow position: | chr4:64216480-64216274 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 159 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 11, 33 |
Conread position: | 36-261 |
Cow position: | chr4:1049072-1048840 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 173 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 26, 147 |
Conread position: | 38-255 |
Cow position: | chr4:17244305-17244522 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 167 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 70, 172 |
Conread position: | 39-218 |
Cow position: | chr4:61986074-61985896 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 127 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 70, 28 |
Conread position: | 46-259 |
Cow position: | chr4:14139582-14139793 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 169 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 26, 20 |
Conread position: | 50-255 |
Cow position: | chr4:827419-827624 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 158 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 58, 160 |
Conread position: | 50-259 |
Cow position: | chr4:19005123-19004909 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 169 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 8, 163 |
Conread position: | 75-243 |
Cow position: | chr4:6267955-6267787 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 135 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 33, 135 |
Conread position: | 79-252 |
Cow position: | chr4:20241759-20241931 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 126 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 31, 137 |
Conread position: | 80-259 |
Cow position: | chr4:41191391-41191210 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 143 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 30, 136 |
Conread position: | 87-261 |
Cow position: | chr4:46666170-46666345 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 139 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 156, 7 |
Conread position: | 109-259 |
Cow position: | chr4:43867465-43867616 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 133, 101 |
Conread position: | 116-259 |
Cow position: | chr4:68837720-68837575 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 113 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 47, 95 |
Show alignments to all cow chromosomes.