Cow genome map
Conread name: | rcut36_b11.y1 |
Conread position: | 1-262 |
Cow position: | chr5:18885262-18885003 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 179 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 110, 37 |
Conread position: | 2-252 |
Cow position: | chr5:48807472-48807218 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 191 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 59, 29 |
Conread position: | 3-259 |
Cow position: | chr5:7142794-7142548 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 191 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 108, 28 |
Conread position: | 3-261 |
Cow position: | chr5:3787199-3787464 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 189 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 59, 33 |
Conread position: | 4-243 |
Cow position: | chr5:59061899-59062143 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 188 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 56, 27 |
Conread position: | 4-255 |
Cow position: | chr5:51744545-51744794 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 186 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 105, 27 |
Conread position: | 4-261 |
Cow position: | chr5:4070482-4070743 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 198 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 70, 16 |
Conread position: | 7-164 |
Cow position: | chr5:4017929-4017769 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 128 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 53, 16 |
Conread position: | 7-188 |
Cow position: | chr5:27908002-27907819 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 146 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 53, 14 |
Conread position: | 7-226 |
Cow position: | chr5:4386506-4386716 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 159 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 74, 14 |
Conread position: | 7-241 |
Cow position: | chr5:46777662-46777898 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 182 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 53, 14 |
Conread position: | 7-242 |
Cow position: | chr5:23959061-23958824 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 186 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 53, 16 |
Conread position: | 7-243 |
Cow position: | chr5:4684535-4684298 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 182 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 53, 14 |
Conread position: | 7-243 |
Cow position: | chr5:4756914-4756676 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 180 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 53, 16 |
Conread position: | 7-243 |
Cow position: | chr5:6587319-6587081 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 179 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 16, 205 |
Conread position: | 7-243 |
Cow position: | chr5:35301367-35301605 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 16 |
Conread position: | 7-243 |
Cow position: | chr5:40131333-40131095 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 187 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 53, 16 |
Conread position: | 7-243 |
Cow position: | chr5:58197285-58197523 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 178 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 53, 14 |
Conread position: | 7-252 |
Cow position: | chr5:3965718-3965969 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 188 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 53, 16 |
Conread position: | 7-252 |
Cow position: | chr5:10774994-10774747 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 186 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 53, 14 |
Conread position: | 7-252 |
Cow position: | chr5:10842112-10841867 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 182 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 44, 14 |
Conread position: | 7-252 |
Cow position: | chr5:26077923-26077679 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 181 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 38, 204 |
Conread position: | 7-252 |
Cow position: | chr5:47829808-47829562 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 176 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 15, 203 |
Conread position: | 7-255 |
Cow position: | chr5:307144-306895 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 191 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 56, 16 |
Conread position: | 7-255 |
Cow position: | chr5:10813481-10813231 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 194 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 53, 16 |
Conread position: | 7-255 |
Cow position: | chr5:26184127-26184378 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 193 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 53, 29 |
Conread position: | 7-255 |
Cow position: | chr5:41376585-41376335 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 195 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 53, 16 |
Conread position: | 7-259 |
Cow position: | chr5:987799-987543 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 194 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 53, 16 |
Conread position: | 7-259 |
Cow position: | chr5:27197878-27198133 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 196 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 53, 14 |
Conread position: | 7-259 |
Cow position: | chr5:32774034-32774290 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 199 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 55, 16 |
Conread position: | 7-259 |
Cow position: | chr5:41960477-41960232 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 199 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 57, 14 |
Conread position: | 7-261 |
Cow position: | chr5:6153630-6153373 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 195 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 55, 26 |
Conread position: | 7-261 |
Cow position: | chr5:76096323-76096580 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 189 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 64, 16 |
Conread position: | 8-181 |
Cow position: | chr5:32952164-32952340 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 135 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 52, 24 |
Conread position: | 8-259 |
Cow position: | chr5:7810979-7810725 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 173 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 15, 25 |
Conread position: | 9-261 |
Cow position: | chr5:10855547-10855291 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 191 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 53, 24 |
Conread position: | 9-261 |
Cow position: | chr5:24295888-24296137 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 176 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 234, 22 |
Conread position: | 10-250 |
Cow position: | chr5:2459256-2459497 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 178 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 25, 158 |
Conread position: | 10-259 |
Cow position: | chr5:12731441-12731190 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 187 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 12, 35 |
Conread position: | 10-259 |
Cow position: | chr5:31707836-31708088 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 189 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 12, 202 |
Conread position: | 10-260 |
Cow position: | chr5:23831048-23830795 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 183 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 27, 162 |
Conread position: | 11-239 |
Cow position: | chr5:24152039-24152271 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 167 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 48, 204 |
Conread position: | 11-252 |
Cow position: | chr5:37733619-37733864 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 185 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 51, 20 |
Conread position: | 11-261 |
Cow position: | chr5:3502838-3502580 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 192 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 51, 20 |
Conread position: | 11-261 |
Cow position: | chr5:10920109-10920362 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 189 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 52, 20 |
Conread position: | 12-255 |
Cow position: | chr5:46737319-46737075 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 180 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 62, 19 |
Conread position: | 12-255 |
Cow position: | chr5:50870891-50871126 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 182 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 52, 9 |
Conread position: | 12-259 |
Cow position: | chr5:18121212-18120957 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 185 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 50, 204 |
Conread position: | 12-259 |
Cow position: | chr5:54620315-54620569 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 177 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 8, 25 |
Conread position: | 12-264 |
Cow position: | chr5:18560136-18559878 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 193 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 50, 19 |
Conread position: | 13-255 |
Cow position: | chr5:2975066-2975309 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 176 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 9, 198 |
Conread position: | 13-261 |
Cow position: | chr5:57816419-57816166 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 186 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 49, 21 |
Conread position: | 14-209 |
Cow position: | chr5:46004599-46004402 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 157 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 49, 10 |
Conread position: | 14-255 |
Cow position: | chr5:59283589-59283835 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 186 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 48, 17 |
Conread position: | 14-261 |
Cow position: | chr5:57481266-57481012 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 194 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 48, 17 |
Conread position: | 14-261 |
Cow position: | chr5:64780741-64780487 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 192 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 48, 22 |
Conread position: | 15-252 |
Cow position: | chr5:34190187-34190439 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 195 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 47, 187 |
Conread position: | 15-252 |
Cow position: | chr5:73487793-73487552 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 176 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 47, 16 |
Conread position: | 16-192 |
Cow position: | chr5:49519822-49520005 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 140 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 7, 16 |
Conread position: | 16-255 |
Cow position: | chr5:23755203-23754964 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 168 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 14, 175 |
Conread position: | 16-259 |
Cow position: | chr5:23230258-23230504 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 184 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 46, 86 |
Conread position: | 16-261 |
Cow position: | chr5:24099927-24100176 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 187 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 21, 49 |
Conread position: | 17-259 |
Cow position: | chr5:5104492-5104740 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 186 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 43, 19 |
Conread position: | 17-259 |
Cow position: | chr5:13046927-13047163 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 180 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 17, 46 |
Conread position: | 17-262 |
Cow position: | chr5:41527527-41527270 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 201 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 13, 206 |
Conread position: | 19-261 |
Cow position: | chr5:2915712-2915961 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 188 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 43, 12 |
Conread position: | 21-243 |
Cow position: | chr5:18665045-18665272 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 174 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 39, 195 |
Conread position: | 21-243 |
Cow position: | chr5:46808582-46808810 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 172 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 39, 195 |
Conread position: | 23-243 |
Cow position: | chr5:31122305-31122080 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 173 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 39, 13 |
Conread position: | 24-243 |
Cow position: | chr5:1340758-1340539 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 166 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 14, 25 |
Conread position: | 24-260 |
Cow position: | chr5:46669205-46669458 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 188 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 14, 208 |
Conread position: | 24-261 |
Cow position: | chr5:7275115-7275358 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 182 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 14, 178 |
Conread position: | 34-227 |
Cow position: | chr5:7227152-7227339 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 145 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 28, 82 |
Conread position: | 36-239 |
Cow position: | chr5:45701604-45701812 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 166 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 24, 180 |
Conread position: | 36-259 |
Cow position: | chr5:18274049-18274273 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 167 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 26, 158 |
Conread position: | 36-259 |
Cow position: | chr5:31100135-31099911 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 178 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 207, 69 |
Conread position: | 36-259 |
Cow position: | chr5:37378420-37378651 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 172 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 23, 180 |
Conread position: | 36-259 |
Cow position: | chr5:49757413-49757184 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 161 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 23, 113 |
Conread position: | 41-259 |
Cow position: | chr5:23686614-23686396 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 168 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 18, 173 |
Conread position: | 43-239 |
Cow position: | chr5:15375993-15376188 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 140 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 66, 18 |
Conread position: | 44-252 |
Cow position: | chr5:12681742-12681533 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 6 |
Conread position: | 52-255 |
Cow position: | chr5:34697967-34698169 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 154 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 57, 22 |
Conread position: | 54-259 |
Cow position: | chr5:54860655-54860450 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 151 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 57, 43 |
Conread position: | 63-243 |
Cow position: | chr5:20108228-20108408 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 143 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 45, 147 |
Conread position: | 81-251 |
Cow position: | chr5:1228134-1228307 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 124 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 14, 133 |
Conread position: | 114-252 |
Cow position: | chr5:12642056-12641920 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 110 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 95, 0 |
Show alignments to all cow chromosomes.