Cow genome map


           Conread name:
           rcut36_b11.y1
        

               Conread position:
               1-264
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 102
               

               Conread position:
               2-255
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               45, 29
               

               Conread position:
               3-179
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               18, 102
               

               Conread position:
               3-252
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               59, 110
               

               Conread position:
               3-261
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               35, 5
               

               Conread position:
               4-224
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               58, 27
               

               Conread position:
               4-252
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               54, 89
               

               Conread position:
               5-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               32, 57
               

               Conread position:
               6-259
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               43, 207
               

               Conread position:
               6-261
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               21, 213
               

               Conread position:
               6-261
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               53, 193
               

               Conread position:
               7-180
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               101, 35
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               52, 17
               

               Conread position:
               7-255
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               101, 35
               

               Conread position:
               7-255
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-255
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-259
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               7-259
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               7-259
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               57, 14
               

               Conread position:
               7-259
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               7-261
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 24
               

               Conread position:
               7-261
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               102, 24
               

               Conread position:
               7-261
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               55, 16
               

               Conread position:
               8-217
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               52, 15
               

               Conread position:
               8-243
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               100, 30
               

               Conread position:
               8-252
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               12, 55
               

               Conread position:
               8-260
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               54, 25
               

               Conread position:
               9-207
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               101, 29
               

               Conread position:
               9-240
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               50, 12
               

               Conread position:
               9-243
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               47, 18
               

               Conread position:
               9-252
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               13, 52
               

               Conread position:
               9-259
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               53, 24
               

               Conread position:
               9-259
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               199
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               9-259
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               53, 12
               

               Conread position:
               9-261
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               54, 24
               

               Conread position:
               9-261
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               66, 24
               

               Conread position:
               9-261
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               36, 208
               

               Conread position:
               9-264
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               53, 21
               

               Conread position:
               10-217
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               10-242
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               27, 202
               

               Conread position:
               10-243
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               10-243
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               12, 88
               

               Conread position:
               10-259
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               12, 124
               

               Conread position:
               10-261
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               52, 21
               

               Conread position:
               11-255
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               48, 25
               

               Conread position:
               11-259
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 21
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               52, 20
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               52, 20
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               51, 31
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               50, 20
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               11-264
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               12-243
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               48, 204
               

               Conread position:
               12-243
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               48, 204
               

               Conread position:
               12-261
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               16, 120
               

               Conread position:
               12-261
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 120
               

               Conread position:
               13-259
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               13, 41
               

               Conread position:
               13-261
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               47, 19
               

               Conread position:
               13-261
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               49, 18
               

               Conread position:
               13-261
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               96, 24
               

               Conread position:
               14-255
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               48, 22
               

               Conread position:
               14-261
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               48, 17
               

               Conread position:
               15-261
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               11, 18
               

               Conread position:
               15-264
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               46, 16
               

               Conread position:
               16-228
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 19
               

               Conread position:
               16-261
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               16, 208
               

               Conread position:
               19-242
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               43, 17
               

               Conread position:
               19-245
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 17
               

               Conread position:
               19-261
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               41, 12
               

               Conread position:
               20-252
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 198
               

               Conread position:
               21-239
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               15, 51
               

               Conread position:
               21-262
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               18, 198
               

               Conread position:
               23-261
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               37, 8
               

               Conread position:
               24-255
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               14, 119
               

               Conread position:
               36-255
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               35, 175
               

               Conread position:
               36-259
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               24, 161
               

               Conread position:
               36-300
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               26, 63
               

               Conread position:
               41-259
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               69, 14
               

               Conread position:
               43-255
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               67, 167
               

               Conread position:
               43-255
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               68, 17
               

               Conread position:
               43-261
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               68, 17
               

               Conread position:
               56-233
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               33, 163
               

               Conread position:
               56-261
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               21, 7
               

               Conread position:
               61-192
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               49, 29
               

               Conread position:
               71-256
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               39, 64
               

               Conread position:
               77-260
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 90
               

               Conread position:
               78-255
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               30, 132
               

               Conread position:
               106-259
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               11, 106
               

               Conread position:
               110-261
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               133, 105
               

               Conread position:
               110-272
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               105, 0
               
Show alignments to all cow chromosomes.