Cow genome map


           Conread name:
           rcut36_b11.y1
        

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 57
               

               Conread position:
               1-258
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               152, 30
               

               Conread position:
               1-261
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               19, 31
               

               Conread position:
               2-261
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               60, 29
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               105, 36
               

               Conread position:
               3-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               31, 5
               

               Conread position:
               4-252
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               58, 27
               

               Conread position:
               4-257
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               24, 28
               

               Conread position:
               4-261
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               58, 27
               

               Conread position:
               6-261
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               56, 25
               

               Conread position:
               7-240
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               56, 15
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               187
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               67, 16
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               55, 16
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               55, 16
               

               Conread position:
               7-252
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               7-252
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-255
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               7-255
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-255
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               15, 204
               

               Conread position:
               7-255
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               53, 14
               

               Conread position:
               7-258
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-258
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-258
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               7-258
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               7-259
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               75, 16
               

               Conread position:
               7-259
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               236, 14
               

               Conread position:
               7-261
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               57, 24
               

               Conread position:
               7-261
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               55, 24
               

               Conread position:
               8-255
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               56, 15
               

               Conread position:
               8-255
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               20, 205
               

               Conread position:
               8-260
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               102, 34
               

               Conread position:
               9-242
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               100, 207
               

               Conread position:
               9-252
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               9-252
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               53, 27
               

               Conread position:
               9-256
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               51, 129
               

               Conread position:
               9-257
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 32
               

               Conread position:
               9-261
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 22
               

               Conread position:
               10-243
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               10-255
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               12, 96
               

               Conread position:
               10-255
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               101, 26
               

               Conread position:
               11-213
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               11-243
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               49, 12
               

               Conread position:
               11-252
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               11-255
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               79, 20
               

               Conread position:
               11-259
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               49, 20
               

               Conread position:
               11-259
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               51, 85
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               191
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               11-261
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               12-179
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               12-243
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               48, 19
               

               Conread position:
               12-243
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               48, 144
               

               Conread position:
               12-243
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               12-262
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               12-295
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 21
               

               Conread position:
               14-261
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               48, 17
               

               Conread position:
               16-261
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               42, 199
               

               Conread position:
               16-261
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               11, 16
               

               Conread position:
               19-257
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               20-238
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               20-253
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               42, 197
               

               Conread position:
               20-259
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 196
               

               Conread position:
               21-261
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               23, 40
               

               Conread position:
               23-243
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               37, 8
               

               Conread position:
               24-239
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               85, 18
               

               Conread position:
               25-261
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               75, 194
               

               Conread position:
               29-255
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               33, 152
               

               Conread position:
               36-252
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               26, 183
               

               Conread position:
               36-259
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               26, 12
               

               Conread position:
               36-262
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               19, 182
               

               Conread position:
               36-264
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               27, 180
               

               Conread position:
               41-259
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               69, 170
               

               Conread position:
               41-259
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 170
               

               Conread position:
               42-204
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               46-258
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               195, 14
               

               Conread position:
               50-207
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               50-259
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               34, 162
               

               Conread position:
               52-210
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 44
               

               Conread position:
               67-230
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               43, 28
               

               Conread position:
               92-255
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 125
               

               Conread position:
               108-256
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               29, 47
               

               Conread position:
               108-260
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               11, 104
               

               Conread position:
               109-243
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               109-259
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               134, 101
               

               Conread position:
               110-261
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               133, 100
               

               Conread position:
               125-259
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 91
               
Show alignments to all cow chromosomes.