Cow genome map

Conread name: rcut36_b11.y1

Conread position: 1-259
Cow position: chr8:48103522-48103781 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 32

Conread position: 1-261
Cow position: chr8:8400420-8400163 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 64

Conread position: 1-261
Cow position: chr8:60062083-60062350 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 19, 31

Conread position: 2-261
Cow position: chr8:11834205-11834467 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 18, 215

Conread position: 3-243
Cow position: chr8:1320689-1320938 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 18, 216

Conread position: 3-243
Cow position: chr8:32436398-32436158 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 19, 5

Conread position: 3-250
Cow position: chr8:23134926-23134673 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 5

Conread position: 3-261
Cow position: chr8:50929430-50929164 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 20, 29

Conread position: 3-262
Cow position: chr8:46218070-46217812 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 110, 56

Conread position: 4-252
Cow position: chr8:49218401-49218670 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 27

Conread position: 4-260
Cow position: chr8:23772317-23772573 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 58, 27

Conread position: 4-261
Cow position: chr8:24914644-24914379 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 58, 27

Conread position: 4-261
Cow position: chr8:38392304-38392568 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 27

Conread position: 4-261
Cow position: chr8:42485586-42485851 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 201
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 21, 29

Conread position: 4-261
Cow position: chr8:59261268-59261007 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 34, 20

Conread position: 6-261
Cow position: chr8:29008308-29008559 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 103, 27

Conread position: 7-213
Cow position: chr8:6764602-6764397 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 35

Conread position: 7-242
Cow position: chr8:14630980-14630743 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 53, 14

Conread position: 7-243
Cow position: chr8:9736926-9737167 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 17, 27

Conread position: 7-243
Cow position: chr8:14256763-14257001 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 16

Conread position: 7-243
Cow position: chr8:21250909-21251147 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 53, 16

Conread position: 7-243
Cow position: chr8:25377662-25377898 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 53, 26

Conread position: 7-243
Cow position: chr8:34349354-34349592 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 53, 16

Conread position: 7-243
Cow position: chr8:37655872-37655634 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 53, 16

Conread position: 7-252
Cow position: chr8:12804465-12804707 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 54, 16

Conread position: 7-252
Cow position: chr8:30155785-30156031 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 14

Conread position: 7-253
Cow position: chr8:1347567-1347319 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 15, 205

Conread position: 7-255
Cow position: chr8:2887436-2887685 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 14

Conread position: 7-255
Cow position: chr8:8516914-8516665 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 15, 204

Conread position: 7-255
Cow position: chr8:37932779-37933029 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 53, 16

Conread position: 7-255
Cow position: chr8:39820135-39820385 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 53, 16

Conread position: 7-255
Cow position: chr8:51068314-51068064 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 53, 16

Conread position: 7-255
Cow position: chr8:56884213-56884460 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 16

Conread position: 7-258
Cow position: chr8:50959926-50959675 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 16

Conread position: 7-261
Cow position: chr8:11824579-11824832 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 55, 14

Conread position: 7-261
Cow position: chr8:12313723-12313462 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 55, 24

Conread position: 9-252
Cow position: chr8:10741961-10741715 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 24

Conread position: 9-252
Cow position: chr8:36634825-36634579 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 53, 24

Conread position: 9-257
Cow position: chr8:3748516-3748262 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 53, 20

Conread position: 10-258
Cow position: chr8:32041079-32040826 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 50, 21

Conread position: 10-259
Cow position: chr8:21157106-21156852 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 50, 26

Conread position: 10-259
Cow position: chr8:58184907-58184676 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 141, 11

Conread position: 10-261
Cow position: chr8:45794068-45793814 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 52, 21

Conread position: 11-210
Cow position: chr8:25438230-25438437 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 51, 27

Conread position: 11-211
Cow position: chr8:17312740-17312944 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 44, 20

Conread position: 11-222
Cow position: chr8:8912168-8912382 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 51, 20

Conread position: 11-252
Cow position: chr8:30486717-30486483 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 49, 25

Conread position: 11-255
Cow position: chr8:10750038-10750280 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 29, 12

Conread position: 11-255
Cow position: chr8:14927200-14926951 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 52, 20

Conread position: 11-259
Cow position: chr8:2386872-2387128 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 46, 205

Conread position: 11-259
Cow position: chr8:41644004-41643747 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 207

Conread position: 11-261
Cow position: chr8:14590194-14589936 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 51, 20

Conread position: 11-261
Cow position: chr8:33590067-33590324 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 194
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 51, 20

Conread position: 11-261
Cow position: chr8:39194529-39194272 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 51, 20

Conread position: 11-261
Cow position: chr8:50995471-50995728 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 51, 20

Conread position: 12-206
Cow position: chr8:47490168-47490368 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 12-233
Cow position: chr8:42656301-42656081 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 43, 18

Conread position: 12-255
Cow position: chr8:4688086-4688333 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 50, 19

Conread position: 12-256
Cow position: chr8:33325736-33325988 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 192
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 48, 19

Conread position: 12-259
Cow position: chr8:45691330-45691083 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 97, 46

Conread position: 12-261
Cow position: chr8:5017865-5018119 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 11, 20

Conread position: 12-261
Cow position: chr8:7162582-7162838 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 11, 20

Conread position: 13-255
Cow position: chr8:19332262-19332506 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 50, 20

Conread position: 13-258
Cow position: chr8:24871098-24870858 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 49

Conread position: 14-243
Cow position: chr8:47068129-47067895 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 46, 17

Conread position: 14-261
Cow position: chr8:3786317-3786571 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 48, 17

Conread position: 14-261
Cow position: chr8:47660634-47660380 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 48, 17

Conread position: 15-225
Cow position: chr8:9539019-9538806 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 47, 199

Conread position: 16-259
Cow position: chr8:2235292-2235046 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 19

Conread position: 20-210
Cow position: chr8:35543392-35543586 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 20-240
Cow position: chr8:8309913-8310129 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 45

Conread position: 20-255
Cow position: chr8:3855333-3855091 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 12, 203

Conread position: 21-255
Cow position: chr8:25524086-25524325 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 41, 15

Conread position: 23-168
Cow position: chr8:44846-44695 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 8

Conread position: 23-243
Cow position: chr8:14255879-14256104 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 178
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 37, 8

Conread position: 23-259
Cow position: chr8:45145608-45145365 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 40, 13

Conread position: 36-240
Cow position: chr8:34525520-34525314 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 36-252
Cow position: chr8:9639585-9639807 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 26, 100

Conread position: 36-259
Cow position: chr8:42158309-42158079 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 28, 39

Conread position: 36-259
Cow position: chr8:47674553-47674775 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 73, 34

Conread position: 37-259
Cow position: chr8:47887556-47887783 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 177

Conread position: 38-252
Cow position: chr8:44700695-44700912 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 24, 108

Conread position: 38-259
Cow position: chr8:53428197-53428427 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 181
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 24, 77

Conread position: 39-243
Cow position: chr8:19052169-19052373 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 70, 177

Conread position: 41-207
Cow position: chr8:51666097-51665927 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 41-259
Cow position: chr8:38605460-38605238 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 21, 173

Conread position: 48-255
Cow position: chr8:1121101-1121310 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 167
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 14, 166

Conread position: 67-261
Cow position: chr8:29923606-29923409 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 160
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 43, 52

Conread position: 75-255
Cow position: chr8:1152515-1152335 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 33, 135

Conread position: 80-256
Cow position: chr8:8904313-8904139 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 161, 28

Conread position: 83-243
Cow position: chr8:24190727-24190887 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 25, 127

Conread position: 85-240
Cow position: chr8:49856566-49856411 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 128
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 25, 106

Conread position: 108-255
Cow position: chr8:40891510-40891364 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 108-259
Cow position: chr8:49295262-49295113 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 121-259
Cow position: chr8:45158726-45158587 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 124, 41

Show alignments to all cow chromosomes.