Cow genome map

Conread name: rcut36_b11.y1

Conread position: 3-255
Cow position:
Alignm length: 259
Alignm identity: 188
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 62, 97

Conread position: 3-261
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 57, 210

Conread position: 4-227
Cow position:
Alignm length: 229
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 211

Conread position: 4-243
Cow position:
Alignm length: 249
Alignm identity: 186
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 22, 29

Conread position: 4-252
Cow position:
Alignm length: 256
Alignm identity: 180
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 58, 32

Conread position: 4-257
Cow position:
Alignm length: 260
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 58, 27

Conread position: 4-261
Cow position:
Alignm length: 267
Alignm identity: 188
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 58, 27

Conread position: 6-255
Cow position:
Alignm length: 256
Alignm identity: 184
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 65, 15

Conread position: 7-216
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 53, 17

Conread position: 7-239
Cow position:
Alignm length: 240
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 53, 16

Conread position: 7-239
Cow position:
Alignm length: 238
Alignm identity: 178
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 67, 16

Conread position: 7-241
Cow position:
Alignm length: 242
Alignm identity: 183
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 14

Conread position: 7-242
Cow position:
Alignm length: 243
Alignm identity: 188
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 53, 16

Conread position: 7-243
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 53, 14

Conread position: 7-243
Cow position:
Alignm length: 243
Alignm identity: 178
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 53, 14

Conread position: 7-243
Cow position:
Alignm length: 260
Alignm identity: 191
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 53, 16

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 185
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 53, 16

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 184
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 53, 16

Conread position: 7-243
Cow position:
Alignm length: 245
Alignm identity: 189
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 53, 16

Conread position: 7-243
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 16

Conread position: 7-243
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 53, 14

Conread position: 7-243
Cow position:
Alignm length: 238
Alignm identity: 181
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 101, 14

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 53, 14

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 182
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 14

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 189
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 52, 16

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 175
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 16

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 184
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 53, 16

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 184
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 53, 16

Conread position: 7-243
Cow position:
Alignm length: 238
Alignm identity: 180
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 101, 14

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 185
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 53, 16

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 185
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 53, 14

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 182
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 14

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 182
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 14

Conread position: 7-243
Cow position:
Alignm length: 244
Alignm identity: 185
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 55, 14

Conread position: 7-255
Cow position:
Alignm length: 256
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 16

Conread position: 7-255
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 53, 16

Conread position: 7-255
Cow position:
Alignm length: 256
Alignm identity: 190
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 55, 14

Conread position: 7-255
Cow position:
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 16

Conread position: 7-255
Cow position:
Alignm length: 252
Alignm identity: 184
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 16, 205

Conread position: 7-255
Cow position:
Alignm length: 261
Alignm identity: 188
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 53, 14

Conread position: 7-255
Cow position:
Alignm length: 256
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 53, 16

Conread position: 7-255
Cow position:
Alignm length: 257
Alignm identity: 195
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 55, 14

Conread position: 7-255
Cow position:
Alignm length: 256
Alignm identity: 190
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 53, 16

Conread position: 7-255
Cow position:
Alignm length: 256
Alignm identity: 194
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 53, 16

Conread position: 7-255
Cow position:
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 16

Conread position: 7-255
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 53, 26

Conread position: 7-258
Cow position:
Alignm length: 262
Alignm identity: 196
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 53, 16

Conread position: 7-258
Cow position:
Alignm length: 262
Alignm identity: 196
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 53, 16

Conread position: 7-258
Cow position:
Alignm length: 261
Alignm identity: 197
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 53, 14

Conread position: 7-259
Cow position:
Alignm length: 257
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 68

Conread position: 7-259
Cow position:
Alignm length: 262
Alignm identity: 199
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 54, 16

Conread position: 7-259
Cow position:
Alignm length: 258
Alignm identity: 187
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 15, 45

Conread position: 7-259
Cow position:
Alignm length: 262
Alignm identity: 195
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 52, 14

Conread position: 7-259
Cow position:
Alignm length: 255
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 235, 16

Conread position: 7-261
Cow position:
Alignm length: 263
Alignm identity: 195
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 53, 16

Conread position: 7-261
Cow position:
Alignm length: 258
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 31

Conread position: 7-264
Cow position:
Alignm length: 262
Alignm identity: 192
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 53, 14

Conread position: 7-264
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 53, 14

Conread position: 7-264
Cow position:
Alignm length: 267
Alignm identity: 200
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 53, 16

Conread position: 8-242
Cow position:
Alignm length: 242
Alignm identity: 181
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 52, 13

Conread position: 8-243
Cow position:
Alignm length: 243
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 15

Conread position: 8-255
Cow position:
Alignm length: 249
Alignm identity: 183
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 101, 23

Conread position: 8-261
Cow position:
Alignm length: 263
Alignm identity: 196
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 54, 15

Conread position: 9-181
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 100, 0

Conread position: 9-243
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 53, 14

Conread position: 9-255
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 100, 33

Conread position: 9-258
Cow position:
Alignm length: 253
Alignm identity: 193
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 101, 62

Conread position: 9-258
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 52, 12

Conread position: 9-261
Cow position:
Alignm length: 267
Alignm identity: 187
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 53, 24

Conread position: 9-261
Cow position:
Alignm length: 259
Alignm identity: 193
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 18, 35

Conread position: 9-261
Cow position:
Alignm length: 264
Alignm identity: 195
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 24

Conread position: 9-261
Cow position:
Alignm length: 262
Alignm identity: 194
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 53, 22

Conread position: 9-261
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 72, 25

Conread position: 9-261
Cow position:
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 24

Conread position: 9-261
Cow position:
Alignm length: 262
Alignm identity: 199
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 53, 24

Conread position: 9-261
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 236, 92

Conread position: 9-261
Cow position:
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 14

Conread position: 9-262
Cow position:
Alignm length: 263
Alignm identity: 190
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 24

Conread position: 9-262
Cow position:
Alignm length: 263
Alignm identity: 191
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 53, 27

Conread position: 10-243
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 204

Conread position: 10-243
Cow position:
Alignm length: 237
Alignm identity: 168
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 12, 79

Conread position: 10-243
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 34, 200

Conread position: 10-243
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 12, 201

Conread position: 10-243
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 21

Conread position: 10-243
Cow position:
Alignm length: 238
Alignm identity: 171
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 12, 42

Conread position: 10-243
Cow position:
Alignm length: 236
Alignm identity: 169
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 12, 201

Conread position: 10-243
Cow position:
Alignm length: 236
Alignm identity: 174
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 12, 201

Conread position: 10-255
Cow position:
Alignm length: 248
Alignm identity: 182
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 27, 201

Conread position: 10-255
Cow position:
Alignm length: 249
Alignm identity: 180
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 35, 51

Conread position: 10-259
Cow position:
Alignm length: 256
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 26

Conread position: 10-259
Cow position:
Alignm length: 254
Alignm identity: 179
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 27, 207

Conread position: 10-259
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 84

Conread position: 10-259
Cow position:
Alignm length: 253
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 26

Conread position: 10-261
Cow position:
Alignm length: 258
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 21

Conread position: 10-261
Cow position:
Alignm length: 261
Alignm identity: 195
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 50, 23

Conread position: 10-261
Cow position:
Alignm length: 261
Alignm identity: 190
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 52, 180

Conread position: 10-264
Cow position:
Alignm length: 263
Alignm identity: 183
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 53, 21

Conread position: 11-201
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 11-252
Cow position:
Alignm length: 255
Alignm identity: 186
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 51, 19

Conread position: 11-252
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 20

Conread position: 11-261
Cow position:
Alignm length: 260
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 20

Conread position: 11-261
Cow position:
Alignm length: 261
Alignm identity: 191
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 51, 20

Conread position: 11-261
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 26, 174

Conread position: 11-261
Cow position:
Alignm length: 260
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 20

Conread position: 12-242
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 11, 20

Conread position: 12-243
Cow position:
Alignm length: 240
Alignm identity: 186
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 48, 21

Conread position: 12-252
Cow position:
Alignm length: 243
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 17

Conread position: 12-260
Cow position:
Alignm length: 261
Alignm identity: 188
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 42, 22

Conread position: 12-261
Cow position:
Alignm length: 259
Alignm identity: 182
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 50, 19

Conread position: 12-264
Cow position:
Alignm length: 261
Alignm identity: 190
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 50, 9

Conread position: 13-233
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 23

Conread position: 13-261
Cow position:
Alignm length: 255
Alignm identity: 186
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 13, 23

Conread position: 14-228
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 22

Conread position: 14-239
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 41

Conread position: 16-243
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 19, 73

Conread position: 16-255
Cow position:
Alignm length: 248
Alignm identity: 182
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 44, 15

Conread position: 16-259
Cow position:
Alignm length: 250
Alignm identity: 184
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 41, 53

Conread position: 16-261
Cow position:
Alignm length: 256
Alignm identity: 193
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 7, 16

Conread position: 20-255
Cow position:
Alignm length: 243
Alignm identity: 179
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 40, 11

Conread position: 20-259
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 40, 11

Conread position: 23-255
Cow position:
Alignm length: 236
Alignm identity: 174
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 39, 8

Conread position: 23-256
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 37, 8

Conread position: 23-259
Cow position:
Alignm length: 246
Alignm identity: 188
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 32, 13

Conread position: 24-170
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 84, 24

Conread position: 25-255
Cow position:
Alignm length: 238
Alignm identity: 160
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 9, 123

Conread position: 26-252
Cow position:
Alignm length: 235
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 192

Conread position: 36-237
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 25, 102

Conread position: 36-239
Cow position:
Alignm length: 207
Alignm identity: 161
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 27, 77

Conread position: 36-250
Cow position:
Alignm length: 225
Alignm identity: 178
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 28, 72

Conread position: 36-261
Cow position:
Alignm length: 233
Alignm identity: 179
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 26, 70

Conread position: 36-261
Cow position:
Alignm length: 237
Alignm identity: 174
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 24, 171

Conread position: 36-264
Cow position:
Alignm length: 236
Alignm identity: 181
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 26, 153

Conread position: 36-264
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 178

Conread position: 43-218
Cow position:
Alignm length: 177
Alignm identity: 140
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 68, 17

Conread position: 43-240
Cow position:
Alignm length: 199
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 17

Conread position: 43-255
Cow position:
Alignm length: 214
Alignm identity: 162
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 65, 7

Conread position: 51-255
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 160

Conread position: 63-255
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 46, 153

Conread position: 69-252
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 41, 142

Conread position: 70-259
Cow position:
Alignm length: 193
Alignm identity: 147
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 38, 140

Conread position: 79-264
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 32, 133

Conread position: 81-262
Cow position:
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 74

Conread position: 83-259
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 133

Conread position: 93-252
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 123

Conread position: 95-258
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 13, 115

Conread position: 101-259
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 9, 114

Show alignments to all cow chromosomes.