Cow genome map


           Conread name:
           rdbla0103_m21.y1
        

               Conread position:
               2-166
               

               Cow position:
               chr27:13861043-13861213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               50, 9
               

               Conread position:
               2-175
               

               Cow position:
               chr27:18546456-18546274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 91
               

               Conread position:
               15-166
               

               Cow position:
               chr27:11021277-11021126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               116, 46
               

               Conread position:
               18-166
               

               Cow position:
               chr27:17564544-17564389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               18-175
               

               Cow position:
               chr27:2246514-2246351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               19-164
               

               Cow position:
               chr27:31238473-31238624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               19-174
               

               Cow position:
               chr27:9261327-9261167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               45, 138
               

               Conread position:
               21-169
               

               Cow position:
               chr27:15211263-15211103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               24-215
               

               Cow position:
               chr27:4921951-4922146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               70, 52
               

               Conread position:
               57-204
               

               Cow position:
               chr27:18780190-18780036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               37, 0
               
Show alignments to all cow chromosomes.