Cow genome map


           Conread name:
           rdbla0103_m21.y1
        

               Conread position:
               2-166
               

               Cow position:
               chr29:682116-681944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               2-174
               

               Cow position:
               chr29:16360047-16360225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 15
               

               Conread position:
               13-184
               

               Cow position:
               chr29:35037171-35037345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               12, 78
               

               Conread position:
               18-177
               

               Cow position:
               chr29:18361247-18361083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               76, 156
               

               Conread position:
               19-165
               

               Cow position:
               chr29:40091676-40091524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               19-170
               

               Cow position:
               chr29:7738249-7738092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               20-162
               

               Cow position:
               chr29:8906969-8907117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               20-177
               

               Cow position:
               chr29:1711487-1711648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               33-177
               

               Cow position:
               chr29:849541-849692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               35-170
               

               Cow position:
               chr29:18338086-18337949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               91, 129
               

               Conread position:
               39-166
               

               Cow position:
               chr29:12193636-12193758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               93, 25
               
Show alignments to all cow chromosomes.