Cow genome map
| Conread name: | rdbla0103_m21.y1 |
| Conread position: | 2-164 |
| Cow position: | chr5:62580426-62580595 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 2-166 |
| Cow position: | chr5:50159666-50159837 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 2-169 |
| Cow position: | chr5:65590667-65590486 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-170 |
| Cow position: | chr5:37048491-37048665 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 79 |
| Conread position: | 4-156 |
| Cow position: | chr5:45911857-45911705 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 119 |
| Conread position: | 9-173 |
| Cow position: | chr5:19299025-19298850 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 13-172 |
| Cow position: | chr5:12581152-12581317 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 15-165 |
| Cow position: | chr5:27679361-27679205 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 15-174 |
| Cow position: | chr5:51953339-51953504 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 16-179 |
| Cow position: | chr5:23234929-23235092 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 80, 107 |
| Conread position: | 18-166 |
| Cow position: | chr5:14072119-14071964 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 49 |
| Conread position: | 18-193 |
| Cow position: | chr5:54761498-54761667 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 69 |
| Conread position: | 19-129 |
| Cow position: | chr5:31944057-31944169 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 19-167 |
| Cow position: | chr5:71279121-71279267 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 25, 76 |
| Conread position: | 19-168 |
| Cow position: | chr5:20648796-20648639 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 19-169 |
| Cow position: | chr5:9025647-9025803 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 19-169 |
| Cow position: | chr5:29029814-29029965 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 112, 57 |
| Conread position: | 19-169 |
| Cow position: | chr5:33516307-33516151 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 19-170 |
| Cow position: | chr5:27493202-27493356 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 143 |
| Conread position: | 19-172 |
| Cow position: | chr5:15705099-15704941 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 19-174 |
| Cow position: | chr5:9585282-9585123 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 38 |
| Conread position: | 19-174 |
| Cow position: | chr5:67579518-67579679 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 19-175 |
| Cow position: | chr5:56826509-56826672 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 77, 99 |
| Conread position: | 19-188 |
| Cow position: | chr5:67001905-67002082 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 19-192 |
| Cow position: | chr5:26562608-26562780 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 75, 15 |
| Conread position: | 22-166 |
| Cow position: | chr5:42587438-42587288 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 23-166 |
| Cow position: | chr5:67463683-67463832 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 23-194 |
| Cow position: | chr5:47697914-47697741 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 29-164 |
| Cow position: | chr5:57629818-57629677 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 29-166 |
| Cow position: | chr5:59640049-59640192 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 33-168 |
| Cow position: | chr5:12602375-12602513 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 92, 49 |
| Conread position: | 33-172 |
| Cow position: | chr5:12329211-12329072 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 61, 89 |
| Conread position: | 33-177 |
| Cow position: | chr5:21145747-21145597 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 39-178 |
| Cow position: | chr5:62862815-62862671 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 55, 128 |
Show alignments to all cow chromosomes.