Cow genome map
| Conread name: | rdbla0103_m21.y1 |
| Conread position: | 2-161 |
| Cow position: | chr6:44771289-44771452 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 2-163 |
| Cow position: | chr6:3936165-3935993 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 2-171 |
| Cow position: | chr6:35266024-35265855 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 15 |
| Conread position: | 2-177 |
| Cow position: | chr6:35126653-35126468 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 32, 96 |
| Conread position: | 3-164 |
| Cow position: | chr6:4666042-4665874 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 13-169 |
| Cow position: | chr6:28008977-28008816 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 21 |
| Conread position: | 13-179 |
| Cow position: | chr6:47547529-47547696 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 81, 47 |
| Conread position: | 13-185 |
| Cow position: | chr6:6244265-6244090 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 77 |
| Conread position: | 15-172 |
| Cow position: | chr6:24260330-24260168 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 152 |
| Conread position: | 16-159 |
| Cow position: | chr6:44389766-44389620 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 46 |
| Conread position: | 16-166 |
| Cow position: | chr6:5678558-5678403 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 8 |
| Conread position: | 17-193 |
| Cow position: | chr6:29078210-29078394 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 18-191 |
| Cow position: | chr6:35697936-35697756 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 19-129 |
| Cow position: | chr6:35832035-35832146 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 19-166 |
| Cow position: | chr6:1940007-1939853 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 105, 77 |
| Conread position: | 19-166 |
| Cow position: | chr6:50502077-50502226 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 75, 124 |
| Conread position: | 19-167 |
| Cow position: | chr6:45692185-45692032 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 100 |
| Conread position: | 19-172 |
| Cow position: | chr6:31687707-31687551 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 77, 45 |
| Conread position: | 19-193 |
| Cow position: | chr6:14280142-14280319 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 77, 156 |
| Conread position: | 19-194 |
| Cow position: | chr6:14162136-14161956 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 75, 155 |
| Conread position: | 20-166 |
| Cow position: | chr6:3017951-3018103 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 24-165 |
| Cow position: | chr6:55398284-55398431 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 33-162 |
| Cow position: | chr6:13092578-13092443 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 33-166 |
| Cow position: | chr6:24337575-24337436 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 37-164 |
| Cow position: | chr6:30287046-30287179 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
Show alignments to all cow chromosomes.