Cow genome map
| Conread name: | rdbla0103_m21.y1 |
| Conread position: | 2-168 |
| Cow position: | chrX:503105-502934 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 97, 20 |
| Conread position: | 2-168 |
| Cow position: | chrX:9910308-9910130 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 2-178 |
| Cow position: | chrX:25453626-25453809 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 32, 174 |
| Conread position: | 13-187 |
| Cow position: | chrX:4590414-4590595 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 138 |
| Conread position: | 15-165 |
| Cow position: | chrX:35552813-35552964 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 109 |
| Conread position: | 16-175 |
| Cow position: | chrX:11675541-11675712 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 16-180 |
| Cow position: | chrX:37980856-37981023 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 105, 18 |
| Conread position: | 18-166 |
| Cow position: | chrX:25653557-25653711 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 18-186 |
| Cow position: | chrX:13403271-13403103 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 113, 43 |
| Conread position: | 19-159 |
| Cow position: | chrX:4625387-4625532 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 19-161 |
| Cow position: | chrX:27458257-27458117 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 74, 41 |
| Conread position: | 19-162 |
| Cow position: | chrX:37236478-37236624 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 73, 26 |
| Conread position: | 19-167 |
| Cow position: | chrX:16817121-16817268 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 110, 75 |
| Conread position: | 19-170 |
| Cow position: | chrX:20505179-20505335 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 19-174 |
| Cow position: | chrX:5956863-5956705 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 19-174 |
| Cow position: | chrX:18518509-18518672 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 19-175 |
| Cow position: | chrX:19391800-19391639 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 35, 91 |
| Conread position: | 19-192 |
| Cow position: | chrX:24286533-24286705 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 107, 70 |
| Conread position: | 19-197 |
| Cow position: | chrX:11983066-11983243 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 140, 77 |
| Conread position: | 19-201 |
| Cow position: | chrX:4440327-4440514 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 41 |
| Conread position: | 20-159 |
| Cow position: | chrX:1427749-1427893 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 74, 87 |
| Conread position: | 23-166 |
| Cow position: | chrX:6672259-6672405 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 73, 23 |
| Conread position: | 24-165 |
| Cow position: | chrX:6472189-6472335 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 68, 48 |
| Conread position: | 24-192 |
| Cow position: | chrX:18699881-18699704 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 33-165 |
| Cow position: | chrX:1330311-1330173 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 35-166 |
| Cow position: | chrX:40353801-40353934 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.