Cow genome map
| Conread name: | rdbla0108_g21.y1 |
| Conread position: | 1-278 |
| Cow position: | chr17:22499170-22498894 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 1-283 |
| Cow position: | chr17:22590213-22589932 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 1-284 |
| Cow position: | chr17:22589541-22589259 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 61, 81 |
| Conread position: | 1-289 |
| Cow position: | chr17:22499086-22498799 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 226, 113 |
| Conread position: | 1-294 |
| Cow position: | chr17:22589625-22589333 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 84, 72 |
| Conread position: | 1-295 |
| Cow position: | chr17:22452156-22451863 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 113, 121 |
| Conread position: | 3-286 |
| Cow position: | chr17:22552541-22552259 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 3-290 |
| Cow position: | chr17:22452238-22451952 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 176, 111 |
| Conread position: | 3-292 |
| Cow position: | chr17:22589959-22589671 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 72, 87 |
| Conread position: | 3-294 |
| Cow position: | chr17:22551869-22551579 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 224, 111 |
| Conread position: | 3-295 |
| Cow position: | chr17:22552961-22552670 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 79 |
| Conread position: | 6-295 |
| Cow position: | chr17:22498913-22498625 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 63 |
| Conread position: | 8-282 |
| Cow position: | chr17:22499331-22499058 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 8-295 |
| Cow position: | chr17:22552032-22551746 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 67, 74 |
| Conread position: | 9-290 |
| Cow position: | chr17:22551947-22551667 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 9-292 |
| Cow position: | chr17:22590289-22590007 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 223, 105 |
| Conread position: | 9-295 |
| Cow position: | chr17:22552199-22551914 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 52, 73 |
| Conread position: | 9-295 |
| Cow position: | chr17:22589785-22589500 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 73 |
| Conread position: | 15-284 |
| Cow position: | chr17:22452058-22451790 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 164, 100 |
| Conread position: | 15-295 |
| Cow position: | chr17:22452310-22452031 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 164, 99 |
| Conread position: | 15-295 |
| Cow position: | chr17:22473405-22473684 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 65, 69 |
| Conread position: | 15-295 |
| Cow position: | chr17:22473489-22473768 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 100, 109 |
| Conread position: | 15-295 |
| Cow position: | chr17:22473573-22473852 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 15-295 |
| Cow position: | chr17:22552277-22551998 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 71, 62 |
| Conread position: | 19-286 |
| Cow position: | chr17:22590027-22589761 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 160, 95 |
| Conread position: | 21-280 |
| Cow position: | chr17:22551767-22551509 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 79, 48 |
| Conread position: | 21-282 |
| Cow position: | chr17:22473663-22473923 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 59, 63 |
| Conread position: | 21-295 |
| Cow position: | chr17:22499234-22498961 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 21-295 |
| Cow position: | chr17:22552103-22551830 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 42, 73 |
| Conread position: | 21-295 |
| Cow position: | chr17:22552355-22552082 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 211, 94 |
| Conread position: | 21-295 |
| Cow position: | chr17:22552607-22552334 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 64, 48 |
| Conread position: | 21-295 |
| Cow position: | chr17:22552859-22552586 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 54, 61 |
| Conread position: | 80-295 |
| Cow position: | chr17:22452413-22452199 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 82-290 |
| Cow position: | chr17:22590300-22590093 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 97, 32 |
Show alignments to all cow chromosomes.