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Cow genome map

           
Conread name:
           
rdbla0108_g21.y1
        

               
Conread position:
               
1-191
               

               
Cow position:
               
chr18:42827714-42827903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 75
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr18:50084096-50084299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr18:14453062-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 68
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr18:53586101-53585879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
165, 113
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr18:55075146-55075375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
134, 110
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr18:14453794-14453559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 83
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr18:50099369-50099605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 82
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr18:40306731-40306968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr18:49032316-49032077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr18:56434858-56435124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 102
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr18:56329121-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
79, 84
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr18:40306311-40306591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
229, 113
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr18:42792030-42792312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
178, 114
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr18:42792534-42792816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr18:43168102-43168384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
74, 83
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr18:49032988-49032706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
88, 76
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr18:50083844-50084126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
142, 113
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr18:50295414-50295696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
155, 113
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr18:53560488-53560770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
155, 113
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr18:53498702-53498986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
110, 172
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr18:50246555-50246839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
229, 113
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr18:53635314-53635029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
279, 113
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr18:56128851-56129136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
177, 113
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:40074997-40075282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
83, 73
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:42791106-42791391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
256, 113
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:1418312-1418600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:42792282-42792570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 87
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:42827462-42827750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 84
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:49033240-49032952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
77, 84
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:56330129-56329841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
147, 114
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr18:50271855-50272144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
83, 74
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:40075081-40075371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:43093192-43092902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 84
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:50271771-50272061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
74, 84
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:51789667-51789377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
164, 113
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:51812826-51812536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
164, 113
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:53559900-53560190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
60, 84
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:53586353-53586063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:54966925-54967215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
155, 113
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:55066632-55066342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:55067052-55066762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
70, 82
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:56433774-56434066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
118, 166
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:56493902-56494192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
93, 76
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr18:50100041-50100332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 72
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr18:41198221-41198513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
161, 113
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:1417976-1418269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
109, 120
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:1418144-1418437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
33, 26
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:14453314-14453021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
93, 88
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:33064376-33064083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
93, 76
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:40324574-40324281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
79, 83
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:41197549-41197842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:41197801-41198094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:41198305-41198598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
161, 113
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:41949122-41948829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:42792198-42792491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
83, 74
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:43093444-43093151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
84, 74
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:43168186-43168479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
64, 83
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:44184408-44184115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
239, 115
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:50030927-50030632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
114, 121
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:50058893-50058600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
237, 113
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:50059229-50058936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
178, 114
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:50059481-50059188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 84
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:50083424-50083717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
62, 68
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:50083676-50083969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
171, 113
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:50098949-50099242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:50246387-50246680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 76
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:50246471-50246764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
74, 84
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:50271603-50271896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 68
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:50848561-50848854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
74, 84
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:53560152-53560445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 76
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:53560236-53560529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:53560320-53560613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
168, 113
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:53572036-53572317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:53586605-53586312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
72, 82
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:53586857-53586564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 82
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:54967093-54967386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 76
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:54979618-54979911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
93, 76
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:56329205-56328912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:56433945-56434228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:56434028-56434312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr18:56494154-56494447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr18:40085961-40085669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
167, 112
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr18:52448176-52448404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
159, 153
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chr18:33064542-33064309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 64
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chr18:56247341-56247111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
153, 111
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr18:41949288-41949055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
161, 111
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr18:43048584-43048350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
159, 112
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr18:43119759-43119525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr18:50099203-50099439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 66
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr18:40075335-40075615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr18:41197719-41197999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
153, 111
               

               
Conread position:
               
3-286
               

               
Cow position:
               
chr18:41197887-41198171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
74, 81
               

               
Conread position:
               
3-286
               

               
Cow position:
               
chr18:42792620-42792904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
227, 111
               

               
Conread position:
               
3-286
               

               
Cow position:
               
chr18:42959660-42959377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
253, 112
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr18:22634534-22634818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr18:40324320-40324034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
76, 83
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr18:56329623-56329337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
3-292
               

               
Cow position:
               
chr18:41948616-41948327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
190, 111
               

               
Conread position:
               
3-292
               

               
Cow position:
               
chr18:49022622-49022910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 62
               

               
Conread position:
               
3-292
               

               
Cow position:
               
chr18:50848731-50849019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
70, 79
               

               
Conread position:
               
3-292
               

               
Cow position:
               
chr18:53509634-53509922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
198, 112
               

               
Conread position:
               
3-292
               

               
Cow position:
               
chr18:56434609-56434896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr18:55008703-55008992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr18:54979704-54979994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 74
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr18:33064794-33064503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
176, 111
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr18:33092962-33092671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr18:40086538-40086247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
244, 123
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr18:40306901-40307192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
250, 113
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr18:42791444-42791735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
70, 79
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr18:42837456-42837165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
77, 82
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr18:42837876-42837585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr18:43022423-43022132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr18:43120095-43119804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr18:43175212-43174921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr18:43175464-43175173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
170, 123
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr18:49032818-49032527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr18:55018024-55018315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 74
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr18:55066798-55066507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
60, 80
               

               
Conread position:
               
4-191
               

               
Cow position:
               
chr18:42743984-42743798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
4-236
               

               
Cow position:
               
chr18:40324151-40323920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
223, 110
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr18:44154138-44153906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr18:42960070-42959791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
78, 66
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr18:40075420-40075701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
198, 111
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr18:42744656-42744375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr18:53498621-53498903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
56, 63
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:41949203-41948918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
158, 110
               

               
Conread position:
               
4-292
               

               
Cow position:
               
chr18:53498114-53498407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
89, 83
               

               
Conread position:
               
4-292
               

               
Cow position:
               
chr18:53559819-53560106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
80, 73
               

               
Conread position:
               
4-292
               

               
Cow position:
               
chr18:54993553-54993840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 90
               

               
Conread position:
               
4-292
               

               
Cow position:
               
chr18:55523537-55523824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
71, 90
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr18:54968267-54968555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
80, 69
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr18:54993805-54994090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
175, 110
               

               
Conread position:
               
4-295
               

               
Cow position:
               
chr18:42744320-42744030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
90, 85
               

               
Conread position:
               
4-295
               

               
Cow position:
               
chr18:42837539-42837249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
4-295
               

               
Cow position:
               
chr18:42984911-42984621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
160, 111
               

               
Conread position:
               
4-295
               

               
Cow position:
               
chr18:44184321-44184031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
165, 110
               

               
Conread position:
               
4-295
               

               
Cow position:
               
chr18:44398210-44397920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
4-295
               

               
Cow position:
               
chr18:44398294-44398004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
161, 110
               

               
Conread position:
               
4-295
               

               
Cow position:
               
chr18:53586518-53586228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 85
               

               
Conread position:
               
4-295
               

               
Cow position:
               
chr18:54967849-54968137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
4-295
               

               
Cow position:
               
chr18:54980209-54980499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 90
               

               
Conread position:
               
4-295
               

               
Cow position:
               
chr18:56433693-56433986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
175, 110
               

               
Conread position:
               
5-200
               

               
Cow position:
               
chr18:44397705-44397511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 88
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr18:42674587-42674391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
188, 109
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr18:41948782-41948550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
5-238
               

               
Cow position:
               
chr18:42984742-42984510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr18:44397789-44397532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
83, 68
               

               
Conread position:
               
5-277
               

               
Cow position:
               
chr18:43119841-43119570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr18:40307071-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
139, 109
               

               
Conread position:
               
5-284
               

               
Cow position:
               
chr18:42674839-42674561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
77, 68
               

               
Conread position:
               
5-284
               

               
Cow position:
               
chr18:49032648-49032370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
84, 70
               

               
Conread position:
               
5-284
               

               
Cow position:
               
chr18:52427863-52428141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
222, 110
               

               
Conread position:
               
5-284
               

               
Cow position:
               
chr18:52428451-52428729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
5-284
               

               
Cow position:
               
chr18:52433632-52433910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
5-285
               

               
Cow position:
               
chr18:42744067-42743788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
5-286
               

               
Cow position:
               
chr18:40324822-40324542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
75, 80
               

               
Conread position:
               
5-286
               

               
Cow position:
               
chr18:42674755-42674475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
245, 109
               

               
Conread position:
               
5-286
               

               
Cow position:
               
chr18:42790942-42791222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
173, 109
               

               
Conread position:
               
5-291
               

               
Cow position:
               
chr18:43048666-43048380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
281, 110
               

               
Conread position:
               
5-291
               

               
Cow position:
               
chr18:50083343-50083629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
5, 110
               

               
Conread position:
               
5-292
               

               
Cow position:
               
chr18:44398125-44397839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
75, 79
               

               
Conread position:
               
5-292
               

               
Cow position:
               
chr18:52433212-52433498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
5-292
               

               
Cow position:
               
chr18:52447422-52447708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
152, 109
               

               
Conread position:
               
5-292
               

               
Cow position:
               
chr18:53526090-53526376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
196, 110
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr18:42675175-42674887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
81, 72
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr18:40306567-40306856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
101, 72
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr18:40324738-40324449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 80
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr18:42675007-42674718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr18:42837706-42837417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
241, 110
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr18:42837790-42837501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr18:42985162-42984873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
165, 110
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr18:42985246-42984957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
248, 108
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr18:42985498-42985209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
248, 109
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr18:43175126-43174837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
168, 110
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr18:44184908-44184619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
160, 110
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr18:44397873-44397584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr18:52448010-52448300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 68
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr18:53636066-53635777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
140, 109
               

               
Conread position:
               
6-275
               

               
Cow position:
               
chr18:41948697-41948429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
6-292
               

               
Cow position:
               
chr18:51839246-51838961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
238, 114
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr18:54980463-54980746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
66, 77
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr18:44253659-44253429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
170, 107
               

               
Conread position:
               
7-284
               

               
Cow position:
               
chr18:40086450-40086176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
7-284
               

               
Cow position:
               
chr18:51368454-51368178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
7-289
               

               
Cow position:
               
chr18:42985412-42985131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
168, 107
               

               
Conread position:
               
7-292
               

               
Cow position:
               
chr18:50848483-50848767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
56, 77
               

               
Conread position:
               
7-295
               

               
Cow position:
               
chr18:22634704-22634991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
65, 84
               

               
Conread position:
               
7-295
               

               
Cow position:
               
chr18:40306989-40307276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
56, 81
               

               
Conread position:
               
7-295
               

               
Cow position:
               
chr18:43119923-43119636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
107, 114
               

               
Conread position:
               
7-295
               

               
Cow position:
               
chr18:53560074-53560361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 79
               

               
Conread position:
               
8-230
               

               
Cow position:
               
chr18:50021576-50021357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 76
               

               
Conread position:
               
8-236
               

               
Cow position:
               
chr18:41198144-41198372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
154, 106
               

               
Conread position:
               
8-237
               

               
Cow position:
               
chr18:53509891-53510122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
144, 93
               

               
Conread position:
               
8-238
               

               
Cow position:
               
chr18:43022250-43022021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
8-248
               

               
Cow position:
               
chr18:44253574-44253336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 114
               

               
Conread position:
               
8-275
               

               
Cow position:
               
chr18:43022586-43022320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
8-282
               

               
Cow position:
               
chr18:42791281-42791554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
77, 69
               

               
Conread position:
               
8-284
               

               
Cow position:
               
chr18:33064621-33064346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
67, 78
               

               
Conread position:
               
8-284
               

               
Cow position:
               
chr18:44154218-44153944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
240, 107
               

               
Conread position:
               
8-284
               

               
Cow position:
               
chr18:50848820-50849095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
8-286
               

               
Cow position:
               
chr18:42791701-42791978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 77
               

               
Conread position:
               
8-287
               

               
Cow position:
               
chr18:42791029-42791307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
67, 78
               

               
Conread position:
               
8-287
               

               
Cow position:
               
chr18:44253335-44253058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
77, 64
               

               
Conread position:
               
8-289
               

               
Cow position:
               
chr18:56434446-56434726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
65, 79
               

               
Conread position:
               
8-290
               

               
Cow position:
               
chr18:50295253-50295534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
55, 75
               

               
Conread position:
               
8-291
               

               
Cow position:
               
chr18:43174955-43174673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
67, 82
               

               
Conread position:
               
8-291
               

               
Cow position:
               
chr18:53509387-53509669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
225, 106
               

               
Conread position:
               
8-292
               

               
Cow position:
               
chr18:50059306-50059023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
67, 74
               

               
Conread position:
               
8-292
               

               
Cow position:
               
chr18:51368117-51367834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
8-293
               

               
Cow position:
               
chr18:54967184-54967468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
8-294
               

               
Cow position:
               
chr18:53498541-53498827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
179, 106
               

               
Conread position:
               
8-294
               

               
Cow position:
               
chr18:55523961-55524246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
76, 63
               

               
Conread position:
               
8-295
               

               
Cow position:
               
chr18:1418235-1418521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 65
               

               
Conread position:
               
8-295
               

               
Cow position:
               
chr18:44184233-44183947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
142, 107
               

               
Conread position:
               
8-295
               

               
Cow position:
               
chr18:44184485-44184199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
170, 107
               

               
Conread position:
               
8-295
               

               
Cow position:
               
chr18:44239990-44240276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
8-295
               

               
Cow position:
               
chr18:44240242-44240528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
236, 107
               

               
Conread position:
               
8-295
               

               
Cow position:
               
chr18:44397954-44397668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
157, 106
               

               
Conread position:
               
8-295
               

               
Cow position:
               
chr18:50246226-50246512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
149, 106
               

               
Conread position:
               
8-295
               

               
Cow position:
               
chr18:50848400-50848686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
69, 76
               

               
Conread position:
               
8-295
               

               
Cow position:
               
chr18:53525841-53526127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
8-295
               

               
Cow position:
               
chr18:54992801-54993087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 83
               

               
Conread position:
               
8-295
               

               
Cow position:
               
chr18:55008792-55009078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
8-295
               

               
Cow position:
               
chr18:55018113-55018399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 83
               

               
Conread position:
               
8-295
               

               
Cow position:
               
chr18:56329702-56329416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
9-236
               

               
Cow position:
               
chr18:53498035-53498261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
9-236
               

               
Cow position:
               
chr18:54967437-54967664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
218, 105
               

               
Conread position:
               
9-290
               

               
Cow position:
               
chr18:56329785-56329505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
71, 76
               

               
Conread position:
               
9-291
               

               
Cow position:
               
chr18:55523374-55523655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
208, 105
               

               
Conread position:
               
9-292
               

               
Cow position:
               
chr18:50058969-50058687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
9-292
               

               
Cow position:
               
chr18:51812314-51812032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
105, 119
               

               
Conread position:
               
9-292
               

               
Cow position:
               
chr18:53587017-53586735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
62, 74
               

               
Conread position:
               
9-292
               

               
Cow position:
               
chr18:55008459-55008739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
147, 97
               

               
Conread position:
               
9-292
               

               
Cow position:
               
chr18:55017778-55018060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
253, 100
               

               
Conread position:
               
9-294
               

               
Cow position:
               
chr18:55018534-55018819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 105
               

               
Conread position:
               
9-294
               

               
Cow position:
               
chr18:55523458-55523742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr18:41948946-41948661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
230, 106
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr18:42827554-42827839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 73
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr18:50048905-50048620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr18:53498377-53498659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
54, 89
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr18:53509304-53509589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
54, 93
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr18:53509556-53509841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
76, 68
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr18:53525758-53526043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
54, 93
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr18:53526010-53526295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
76, 68
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr18:53559740-53560025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
169, 105
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr18:53586681-53586396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
77, 68
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr18:53586765-53586480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr18:54967605-54967887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr18:55523710-55523995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr18:55523794-55524079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
221, 105
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr18:55524046-55524331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 76
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr18:56493994-56494279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
11, 5
               

               
Conread position:
               
15-216
               

               
Cow position:
               
chr18:55018708-55018907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
22, 73
               

               
Conread position:
               
15-238
               

               
Cow position:
               
chr18:43022495-43022273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
15-238
               

               
Cow position:
               
chr18:44239829-44240051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
100, 112
               

               
Conread position:
               
15-267
               

               
Cow position:
               
chr18:53571967-53572207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
15-275
               

               
Cow position:
               
chr18:22634964-22635223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 79
               

               
Conread position:
               
15-275
               

               
Cow position:
               
chr18:43093094-43092835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
65, 69
               

               
Conread position:
               
15-278
               

               
Cow position:
               
chr18:49023054-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
15-278
               

               
Cow position:
               
chr18:56248171-56247909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
163, 99
               

               
Conread position:
               
15-281
               

               
Cow position:
               
chr18:42837612-42837347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
15-284
               

               
Cow position:
               
chr18:50058711-50058445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
164, 99
               

               
Conread position:
               
15-284
               

               
Cow position:
               
chr18:50099047-50099315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 70
               

               
Conread position:
               
15-284
               

               
Cow position:
               
chr18:51812728-51812460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
15-284
               

               
Cow position:
               
chr18:56247411-56247145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 38
               

               
Conread position:
               
15-285
               

               
Cow position:
               
chr18:42837360-42837091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
15-286
               

               
Cow position:
               
chr18:42674661-42674391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
148, 99
               

               
Conread position:
               
15-286
               

               
Cow position:
               
chr18:42791204-42791474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
48, 68
               

               
Conread position:
               
15-286
               

               
Cow position:
               
chr18:53509730-53509998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
15-287
               

               
Cow position:
               
chr18:14453948-14453679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
84, 64
               

               
Conread position:
               
15-289
               

               
Cow position:
               
chr18:53526184-53526455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
15-290
               

               
Cow position:
               
chr18:42744141-42743867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
147, 100
               

               
Conread position:
               
15-290
               

               
Cow position:
               
chr18:51367607-51367333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
212, 87
               

               
Conread position:
               
15-291
               

               
Cow position:
               
chr18:54980304-54980578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 79
               

               
Conread position:
               
15-291
               

               
Cow position:
               
chr18:54993648-54993922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 79
               

               
Conread position:
               
15-292
               

               
Cow position:
               
chr18:22634628-22634904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 99
               

               
Conread position:
               
15-292
               

               
Cow position:
               
chr18:33092866-33092590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
15-292
               

               
Cow position:
               
chr18:51751927-51751651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
147, 99
               

               
Conread position:
               
15-292
               

               
Cow position:
               
chr18:51752179-51751903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
50, 73
               

               
Conread position:
               
15-292
               

               
Cow position:
               
chr18:51789569-51789293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
15-292
               

               
Cow position:
               
chr18:51812560-51812284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
215, 99
               

               
Conread position:
               
15-292
               

               
Cow position:
               
chr18:52447684-52447960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
142, 99
               

               
Conread position:
               
15-292
               

               
Cow position:
               
chr18:52447936-52448212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
73, 60
               

               
Conread position:
               
15-292
               

               
Cow position:
               
chr18:53498465-53498740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
212, 74
               

               
Conread position:
               
15-292
               

               
Cow position:
               
chr18:54967944-54968218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
15-292
               

               
Cow position:
               
chr18:54968026-54968302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 79
               

               
Conread position:
               
15-292
               

               
Cow position:
               
chr18:54979968-54980244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 67
               

               
Conread position:
               
15-292
               

               
Cow position:
               
chr18:54980136-54980412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 79
               

               
Conread position:
               
15-292
               

               
Cow position:
               
chr18:56434201-56434477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 99
               

               
Conread position:
               
15-292
               

               
Cow position:
               
chr18:56434369-56434645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 99
               

               
Conread position:
               
15-293
               

               
Cow position:
               
chr18:56434788-56435056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
64, 56
               

               
Conread position:
               
15-294
               

               
Cow position:
               
chr18:33064698-33064420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 73
               

               
Conread position:
               
15-294
               

               
Cow position:
               
chr18:54979884-54980162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:14453216-14452937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
45, 50
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:41198067-41198346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 70
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:42675249-42674970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:42675333-42675054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
147, 99
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:42744477-42744198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:42827392-42827671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 71
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:43048740-43048461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:43120335-43120056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:44184646-44184367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 109
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:44239745-44240024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
178, 100
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:44240417-44240696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
50, 70
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:44398453-44398172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
6, 16
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:49022886-49023165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
151, 99
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:53509225-53509505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
7, 65
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:53525679-53525959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
7, 65
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:53635384-53635105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
128, 99
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:54967275-54967554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:54967359-54967638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
58, 77
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:54967776-54968053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:54968110-54968389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:54968194-54968473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
238, 99
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:54979800-54980079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:54992976-54993255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:54993144-54993423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 79
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:54993312-54993591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:55008381-55008658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
141, 99
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:55008967-55009246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:55017868-55018147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
162, 108
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:55018204-55018483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 99
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:55018456-55018736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 79
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:56247573-56247302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
15-295
               

               
Cow position:
               
chr18:56434117-56434396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
16-283
               

               
Cow position:
               
chr18:52428630-52428896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
16-284
               

               
Cow position:
               
chr18:52433307-52433574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
236, 99
               

               
Conread position:
               
16-289
               

               
Cow position:
               
chr18:42791961-42792233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
163, 98
               

               
Conread position:
               
16-292
               

               
Cow position:
               
chr18:14454031-14453756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 66
               

               
Conread position:
               
16-292
               

               
Cow position:
               
chr18:33064025-33063749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
16-292
               

               
Cow position:
               
chr18:50099552-50099827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
44, 63
               

               
Conread position:
               
16-292
               

               
Cow position:
               
chr18:52428042-52428317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
16-293
               

               
Cow position:
               
chr18:50021907-50021628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
16-295
               

               
Cow position:
               
chr18:43022998-43022720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
16-295
               

               
Cow position:
               
chr18:44253818-44253540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
193, 99
               

               
Conread position:
               
16-295
               

               
Cow position:
               
chr18:50022162-50021881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 66
               

               
Conread position:
               
16-295
               

               
Cow position:
               
chr18:54966856-54967134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
161, 98
               

               
Conread position:
               
16-295
               

               
Cow position:
               
chr18:55017704-55017979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
140, 71
               

               
Conread position:
               
17-292
               

               
Cow position:
               
chr18:22634798-22635072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 14
               

               
Conread position:
               
17-292
               

               
Cow position:
               
chr18:54979466-54979740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
139, 97
               

               
Conread position:
               
17-295
               

               
Cow position:
               
chr18:54992726-54993003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
18-293
               

               
Cow position:
               
chr18:55009054-55009328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
55, 69
               

               
Conread position:
               
18-295
               

               
Cow position:
               
chr18:40086105-40085837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
18-295
               

               
Cow position:
               
chr18:54980055-54980331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
18-295
               

               
Cow position:
               
chr18:54993399-54993675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
18-295
               

               
Cow position:
               
chr18:55018375-55018651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 76
               

               
Conread position:
               
19-238
               

               
Cow position:
               
chr18:56494256-56494474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chr18:42984812-42984548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
221, 96
               

               
Conread position:
               
19-286
               

               
Cow position:
               
chr18:44253731-44253463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
143, 96
               

               
Conread position:
               
19-290
               

               
Cow position:
               
chr18:41198491-41198763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
61, 66
               

               
Conread position:
               
19-290
               

               
Cow position:
               
chr18:54967696-54967966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chr18:40074850-40075118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
19-291
               

               
Cow position:
               
chr18:44154291-44154019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
264, 95
               

               
Conread position:
               
19-292
               

               
Cow position:
               
chr18:43093594-43093322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
56, 64
               

               
Conread position:
               
19-292
               

               
Cow position:
               
chr18:50271537-50271809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
66, 47
               

               
Conread position:
               
19-293
               

               
Cow position:
               
chr18:33064106-33063832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
54, 82
               

               
Conread position:
               
19-294
               

               
Cow position:
               
chr18:40306245-40306519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
138, 96
               

               
Conread position:
               
19-294
               

               
Cow position:
               
chr18:54993064-54993338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr18:40075267-40075542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
72, 58
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr18:41198407-41198682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
208, 95
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr18:42791880-42792155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
54, 63
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr18:42792468-42792743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
160, 95
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr18:43022743-43022468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
234, 94
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr18:43093258-43092983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 64
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr18:43094002-43093727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
56, 64
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr18:43174860-43174585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
204, 96
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr18:44240085-44240360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
96, 105
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr18:44253240-44252966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr18:56434289-56434564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
160, 95
               

               
Conread position:
               
20-236
               

               
Cow position:
               
chr18:50030738-50030520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
127, 95
               

               
Conread position:
               
20-275
               

               
Cow position:
               
chr18:40324639-40324385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
20-284
               

               
Cow position:
               
chr18:50099472-50099735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
207, 94
               

               
Conread position:
               
20-284
               

               
Cow position:
               
chr18:52428130-52428393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
207, 95
               

               
Conread position:
               
20-286
               

               
Cow position:
               
chr18:42791545-42791810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
66, 43
               

               
Conread position:
               
20-286
               

               
Cow position:
               
chr18:50058790-50058525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
55, 63
               

               
Conread position:
               
20-289
               

               
Cow position:
               
chr18:50048642-50048374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
55, 63
               

               
Conread position:
               
20-291
               

               
Cow position:
               
chr18:52012449-52012179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
159, 56
               

               
Conread position:
               
20-292
               

               
Cow position:
               
chr18:52428382-52428653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
20-292
               

               
Cow position:
               
chr18:52433563-52433834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
20-292
               

               
Cow position:
               
chr18:53497965-53498233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
20-292
               

               
Cow position:
               
chr18:53560423-53560694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
65, 57
               

               
Conread position:
               
20-292
               

               
Cow position:
               
chr18:56316378-56316650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
182, 95
               

               
Conread position:
               
20-295
               

               
Cow position:
               
chr18:50022071-50021797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
53, 64
               

               
Conread position:
               
20-295
               

               
Cow position:
               
chr18:50083947-50084221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
130, 106
               

               
Conread position:
               
20-295
               

               
Cow position:
               
chr18:50099892-50100166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
152, 94
               

               
Conread position:
               
20-295
               

               
Cow position:
               
chr18:50099976-50100250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
207, 94
               

               
Conread position:
               
21-277
               

               
Cow position:
               
chr18:49032380-49032125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
59, 64
               

               
Conread position:
               
21-282
               

               
Cow position:
               
chr18:14453126-14452866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
59, 64
               

               
Conread position:
               
21-284
               

               
Cow position:
               
chr18:43168038-43168300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
21-289
               

               
Cow position:
               
chr18:42827650-42827918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
54, 62
               

               
Conread position:
               
21-291
               

               
Cow position:
               
chr18:22634886-22635155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 93
               

               
Conread position:
               
21-291
               

               
Cow position:
               
chr18:50059545-50059275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
265, 93
               

               
Conread position:
               
21-291
               

               
Cow position:
               
chr18:52012197-52011928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
21-292
               

               
Cow position:
               
chr18:50099809-50100079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 64
               

               
Conread position:
               
21-292
               

               
Cow position:
               
chr18:55067116-55066846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
21-292
               

               
Cow position:
               
chr18:56128787-56129057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
122, 93
               

               
Conread position:
               
21-295
               

               
Cow position:
               
chr18:40074933-40075206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
21-295
               

               
Cow position:
               
chr18:40306667-40306940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 65
               

               
Conread position:
               
21-295
               

               
Cow position:
               
chr18:49033052-49032779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
21-295
               

               
Cow position:
               
chr18:50271707-50271980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 62
               

               
Conread position:
               
21-295
               

               
Cow position:
               
chr18:53635462-53635189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
21-295
               

               
Cow position:
               
chr18:55008637-55008910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 56
               

               
Conread position:
               
21-295
               

               
Cow position:
               
chr18:55066696-55066423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
21-295
               

               
Cow position:
               
chr18:56128703-56128976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
21-295
               

               
Cow position:
               
chr18:56329437-56329164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
228, 90
               

               
Conread position:
               
22-292
               

               
Cow position:
               
chr18:56493839-56494108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 91
               

               
Conread position:
               
26-284
               

               
Cow position:
               
chr18:43167961-43168216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
27-295
               

               
Cow position:
               
chr18:42985054-42984789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
27-295
               

               
Cow position:
               
chr18:56247480-56247218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
135, 18
               

               
Conread position:
               
28-284
               

               
Cow position:
               
chr18:42960296-42960043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
35, 7
               

               
Conread position:
               
28-295
               

               
Cow position:
               
chr18:43023068-43022804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
136, 7
               

               
Conread position:
               
29-295
               

               
Cow position:
               
chr18:56330185-56329920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 56
               

               
Conread position:
               
36-290
               

               
Cow position:
               
chr18:50083291-50083544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
193, 78
               

               
Conread position:
               
36-295
               

               
Cow position:
               
chr18:56247806-56247546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
39-295
               

               
Cow position:
               
chr18:40324872-40324617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
47, 34
               

               
Conread position:
               
40-286
               

               
Cow position:
               
chr18:56248225-56247985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
139, 47
               

               
Conread position:
               
41-292
               

               
Cow position:
               
chr18:41949334-41949084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
208, 85
               

               
Conread position:
               
41-295
               

               
Cow position:
               
chr18:50021711-50021458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
51-291
               

               
Cow position:
               
chr18:55075112-55075352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
128, 63
               

               
Conread position:
               
52-295
               

               
Cow position:
               
chr18:54979417-54979659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
65-292
               

               
Cow position:
               
chr18:52012487-52012263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
199, 40
               

               
Conread position:
               
92-295
               

               
Cow position:
               
chr18:22634539-22634739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
126-295
               

               
Cow position:
               
chr18:41949334-41949165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.