Cow genome map
| Conread name: | rdbla0108_g21.y1 |
| Conread position: | 1-286 |
| Cow position: | chr19:14940214-14940498 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 88, 74 |
| Conread position: | 1-290 |
| Cow position: | chr19:23613406-23613694 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 194, 113 |
| Conread position: | 1-291 |
| Cow position: | chr19:14940550-14940839 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 87, 74 |
| Conread position: | 1-291 |
| Cow position: | chr19:23649696-23649986 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 141, 113 |
| Conread position: | 1-292 |
| Cow position: | chr19:14948325-14948035 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1-292 |
| Cow position: | chr19:23649444-23649734 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 179, 113 |
| Conread position: | 1-293 |
| Cow position: | chr19:14959184-14958898 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 285, 75 |
| Conread position: | 1-295 |
| Cow position: | chr19:20678261-20678554 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 183, 113 |
| Conread position: | 3-236 |
| Cow position: | chr19:23596924-23597154 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 227, 109 |
| Conread position: | 3-284 |
| Cow position: | chr19:14959593-14959313 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 174, 111 |
| Conread position: | 3-284 |
| Cow position: | chr19:14960247-14959969 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 176, 94 |
| Conread position: | 3-295 |
| Cow position: | chr19:14940300-14940591 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 227, 111 |
| Conread position: | 3-295 |
| Cow position: | chr19:14940468-14940759 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 3-295 |
| Cow position: | chr19:14959675-14959386 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 225, 24 |
| Conread position: | 3-295 |
| Cow position: | chr19:14960331-14960042 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 159, 109 |
| Conread position: | 4-249 |
| Cow position: | chr19:20678177-20678429 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 6, 83 |
| Conread position: | 4-292 |
| Cow position: | chr19:43570247-43569960 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 72, 84 |
| Conread position: | 4-295 |
| Cow position: | chr19:14940721-14941011 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 140, 110 |
| Conread position: | 8-230 |
| Cow position: | chr19:20677680-20677901 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 53, 77 |
| Conread position: | 8-240 |
| Cow position: | chr19:23614169-23614400 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 72, 76 |
| Conread position: | 8-284 |
| Cow position: | chr19:23597346-23597621 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 167, 106 |
| Conread position: | 8-284 |
| Cow position: | chr19:23614085-23614360 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 77, 65 |
| Conread position: | 8-293 |
| Cow position: | chr19:43569991-43569708 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 65, 85 |
| Conread position: | 8-294 |
| Cow position: | chr19:23614421-23614706 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 65, 75 |
| Conread position: | 8-295 |
| Cow position: | chr19:43570075-43569789 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 9-276 |
| Cow position: | chr19:14940810-14941076 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 170, 105 |
| Conread position: | 9-287 |
| Cow position: | chr19:14940138-14940415 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 156, 105 |
| Conread position: | 9-293 |
| Cow position: | chr19:23613666-23613950 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 277, 105 |
| Conread position: | 9-295 |
| Cow position: | chr19:23650124-23650409 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 15-238 |
| Cow position: | chr19:23613588-23613810 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 15-286 |
| Cow position: | chr19:23614008-23614280 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 265, 99 |
| Conread position: | 15-290 |
| Cow position: | chr19:14960069-14959797 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 163, 99 |
| Conread position: | 15-292 |
| Cow position: | chr19:14960153-14959876 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 271, 99 |
| Conread position: | 15-295 |
| Cow position: | chr19:14940060-14940339 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 55, 72 |
| Conread position: | 15-295 |
| Cow position: | chr19:20678359-20678638 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 19-281 |
| Cow position: | chr19:23650218-23650479 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 66 |
| Conread position: | 19-284 |
| Cow position: | chr19:23613508-23613772 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 54, 66 |
| Conread position: | 19-295 |
| Cow position: | chr19:20677607-20677882 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 61, 66 |
| Conread position: | 19-295 |
| Cow position: | chr19:23597105-23597380 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 211, 106 |
| Conread position: | 20-286 |
| Cow position: | chr19:14915955-14916220 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 65, 20 |
| Conread position: | 20-295 |
| Cow position: | chr19:23613761-23614035 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 55, 63 |
| Conread position: | 21-284 |
| Cow position: | chr19:23597191-23597453 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 59, 64 |
| Conread position: | 21-284 |
| Cow position: | chr19:23649632-23649894 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 59, 64 |
| Conread position: | 21-284 |
| Cow position: | chr19:23649800-23650062 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 36, 49 |
| Conread position: | 21-286 |
| Cow position: | chr19:23613846-23614110 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 67, 61 |
| Conread position: | 21-286 |
| Cow position: | chr19:23614854-23615118 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 158, 94 |
| Conread position: | 21-286 |
| Cow position: | chr19:23649548-23649812 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 21-290 |
| Cow position: | chr19:23650052-23650320 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 21-292 |
| Cow position: | chr19:20635387-20635117 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 55, 64 |
| Conread position: | 21-295 |
| Cow position: | chr19:20678029-20678302 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 63 |
| Conread position: | 27-292 |
| Cow position: | chr19:14939988-14940252 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 175, 87 |
| Conread position: | 29-286 |
| Cow position: | chr19:23613350-23613608 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 40 |
| Conread position: | 39-295 |
| Cow position: | chr19:14960379-14960126 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 140, 75 |
Show alignments to all cow chromosomes.