Cow genome map
| Conread name: | rdbla0108_g21.y1 |
| Conread position: | 1-284 |
| Cow position: | chr22:12399620-12399338 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 1-284 |
| Cow position: | chr22:12431852-12431570 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 72, 83 |
| Conread position: | 1-285 |
| Cow position: | chr22:12385190-12384907 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 149, 113 |
| Conread position: | 1-286 |
| Cow position: | chr22:12431264-12430980 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 74, 84 |
| Conread position: | 1-286 |
| Cow position: | chr22:12476081-12475797 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 1-289 |
| Cow position: | chr22:12399200-12398913 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 147, 113 |
| Conread position: | 1-290 |
| Cow position: | chr22:12385444-12385154 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 36, 86 |
| Conread position: | 1-292 |
| Cow position: | chr22:12431180-12430890 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 1-295 |
| Cow position: | chr22:12432104-12431811 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 245, 114 |
| Conread position: | 1-295 |
| Cow position: | chr22:12475661-12475368 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 173, 114 |
| Conread position: | 1-295 |
| Cow position: | chr22:12476165-12475872 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 168, 114 |
| Conread position: | 1-295 |
| Cow position: | chr22:12476333-12476040 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 147, 114 |
| Conread position: | 1-295 |
| Cow position: | chr22:12498926-12499219 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 147, 114 |
| Conread position: | 1-295 |
| Cow position: | chr22:12499598-12499891 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 166, 113 |
| Conread position: | 3-290 |
| Cow position: | chr22:12399282-12398996 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 159, 111 |
| Conread position: | 3-292 |
| Cow position: | chr22:12399786-12399498 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 3-295 |
| Cow position: | chr22:11641084-11641375 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 91 |
| Conread position: | 3-295 |
| Cow position: | chr22:12458382-12458091 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 5-286 |
| Cow position: | chr22:12458212-12457932 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 68, 78 |
| Conread position: | 5-292 |
| Cow position: | chr22:12385524-12385236 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 79, 65 |
| Conread position: | 6-295 |
| Cow position: | chr22:14468036-14468324 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 7-277 |
| Cow position: | chr22:46654411-46654680 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 56, 86 |
| Conread position: | 8-200 |
| Cow position: | chr22:12475486-12475295 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 154, 106 |
| Conread position: | 8-290 |
| Cow position: | chr22:12399445-12399164 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 62, 75 |
| Conread position: | 8-295 |
| Cow position: | chr22:12431341-12431055 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 63, 74 |
| Conread position: | 9-192 |
| Cow position: | chr22:11666763-11666945 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 85, 68 |
| Conread position: | 9-236 |
| Cow position: | chr22:12476241-12476015 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 99, 112 |
| Conread position: | 9-236 |
| Cow position: | chr22:12499018-12499245 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 218, 105 |
| Conread position: | 9-286 |
| Cow position: | chr22:11641174-11641452 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 75 |
| Conread position: | 9-286 |
| Cow position: | chr22:12458460-12458185 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 106, 113 |
| Conread position: | 9-295 |
| Cow position: | chr22:12418795-12418510 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 248, 105 |
| Conread position: | 15-226 |
| Cow position: | chr22:12458118-12457908 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 59, 70 |
| Conread position: | 15-277 |
| Cow position: | chr22:12399018-12398757 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 69 |
| Conread position: | 15-284 |
| Cow position: | chr22:12458622-12458354 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 162, 99 |
| Conread position: | 15-286 |
| Cow position: | chr22:12385684-12385412 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 15, 71 |
| Conread position: | 15-286 |
| Cow position: | chr22:12399354-12399084 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 65, 70 |
| Conread position: | 15-286 |
| Cow position: | chr22:12399690-12399420 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 67, 55 |
| Conread position: | 15-290 |
| Cow position: | chr22:12499360-12499634 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 147, 101 |
| Conread position: | 15-291 |
| Cow position: | chr22:12431670-12431394 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 248, 99 |
| Conread position: | 15-295 |
| Cow position: | chr22:12430998-12430719 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 148, 99 |
| Conread position: | 16-233 |
| Cow position: | chr22:14468130-14468346 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 16-275 |
| Cow position: | chr22:12476402-12476144 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 163, 98 |
| Conread position: | 16-284 |
| Cow position: | chr22:12498857-12499124 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 163, 98 |
| Conread position: | 16-290 |
| Cow position: | chr22:12458537-12458264 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 16-292 |
| Cow position: | chr22:12499529-12499804 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 162, 99 |
| Conread position: | 19-295 |
| Cow position: | chr22:12499280-12499555 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 64 |
| Conread position: | 21-290 |
| Cow position: | chr22:12418867-12418599 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 142, 92 |
| Conread position: | 22-286 |
| Cow position: | chr22:12431409-12431148 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 212, 12 |
| Conread position: | 28-287 |
| Cow position: | chr22:12458021-12457761 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 45, 55 |
| Conread position: | 29-295 |
| Cow position: | chr22:12431908-12431643 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 39-295 |
| Cow position: | chr22:12419017-12418762 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 224, 76 |
Show alignments to all cow chromosomes.