Cow genome map
| Conread name: | rdbla0108_g21.y1 |
| Conread position: | 1-230 |
| Cow position: | chr25:33145153-33145381 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1-236 |
| Cow position: | chr25:34769481-34769247 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 79, 84 |
| Conread position: | 1-242 |
| Cow position: | chr25:36801106-36801347 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 76, 82 |
| Conread position: | 1-284 |
| Cow position: | chr25:33127941-33128223 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 254, 110 |
| Conread position: | 1-284 |
| Cow position: | chr25:33157418-33157136 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 178, 113 |
| Conread position: | 1-290 |
| Cow position: | chr25:33299206-33299494 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 142, 113 |
| Conread position: | 1-290 |
| Cow position: | chr25:36800854-36801142 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 68, 81 |
| Conread position: | 1-292 |
| Cow position: | chr25:34769817-34769527 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1-295 |
| Cow position: | chr25:33157166-33156873 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 1-295 |
| Cow position: | chr25:33298786-33299079 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 62, 81 |
| Conread position: | 1-295 |
| Cow position: | chr25:34447245-34447538 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 161, 110 |
| Conread position: | 1-295 |
| Cow position: | chr25:36800938-36801231 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 74, 83 |
| Conread position: | 1-295 |
| Cow position: | chr25:36801598-36801891 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 161, 110 |
| Conread position: | 3-290 |
| Cow position: | chr25:34770067-34769781 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 86, 76 |
| Conread position: | 3-292 |
| Cow position: | chr25:23420440-23420728 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 73, 85 |
| Conread position: | 3-292 |
| Cow position: | chr25:34769731-34769443 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 3-293 |
| Cow position: | chr25:34433497-34433784 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 162, 110 |
| Conread position: | 3-295 |
| Cow position: | chr25:33157332-33157041 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 3-295 |
| Cow position: | chr25:34769899-34769608 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 5-284 |
| Cow position: | chr25:34769645-34769367 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 174, 110 |
| Conread position: | 7-277 |
| Cow position: | chr25:33299548-33299817 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 34 |
| Conread position: | 7-282 |
| Cow position: | chr25:326984-327258 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 51, 64 |
| Conread position: | 7-295 |
| Cow position: | chr25:33299380-33299667 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 57, 76 |
| Conread position: | 8-254 |
| Cow position: | chr25:23420613-23420858 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 8-284 |
| Cow position: | chr25:34447420-34447695 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 76, 65 |
| Conread position: | 8-290 |
| Cow position: | chr25:33299045-33299326 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 57, 75 |
| Conread position: | 9-228 |
| Cow position: | chr25:33156990-33156773 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 9-290 |
| Cow position: | chr25:33298626-33298906 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 56, 75 |
| Conread position: | 9-290 |
| Cow position: | chr25:36801030-36801310 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 9-295 |
| Cow position: | chr25:33298962-33299247 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 76 |
| Conread position: | 15-286 |
| Cow position: | chr25:23420536-23420808 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 65, 70 |
| Conread position: | 15-295 |
| Cow position: | chr25:33305813-33305536 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 54, 68 |
| Conread position: | 16-281 |
| Cow position: | chr25:33305332-33305073 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 99, 14 |
| Conread position: | 16-286 |
| Cow position: | chr25:34447344-34447613 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 18-295 |
| Cow position: | chr25:23420371-23420647 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 142, 96 |
| Conread position: | 19-295 |
| Cow position: | chr25:34770135-34769860 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 70, 58 |
| Conread position: | 20-286 |
| Cow position: | chr25:33305972-33305713 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 49, 27 |
| Conread position: | 20-295 |
| Cow position: | chr25:33305161-33304891 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 120, 49 |
| Conread position: | 21-281 |
| Cow position: | chr25:33298722-33298981 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 61 |
| Conread position: | 21-290 |
| Cow position: | chr25:33127877-33128145 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 21-295 |
| Cow position: | chr25:34447181-34447454 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 90, 100 |
| Conread position: | 25-293 |
| Cow position: | chr25:346443-346711 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 205, 86 |
| Conread position: | 26-292 |
| Cow position: | chr25:36801371-36801636 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 61, 43 |
| Conread position: | 27-295 |
| Cow position: | chr25:33157476-33157209 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 36-295 |
| Cow position: | chr25:33298569-33298827 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 114, 78 |
Show alignments to all cow chromosomes.