Cow genome map


           Conread name:
           rdbla0112_h19.y1
        

               Conread position:
               160-430
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 209
               

               Conread position:
               161-422
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               128, 35
               

               Conread position:
               164-427
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               134, 53
               

               Conread position:
               166-438
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               125, 215
               

               Conread position:
               167-342
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               134, 67
               

               Conread position:
               167-370
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               9, 107
               

               Conread position:
               167-387
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               117, 74
               

               Conread position:
               167-387
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               167-436
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               119, 63
               

               Conread position:
               167-438
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               98, 63
               

               Conread position:
               171-380
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               121, 46
               

               Conread position:
               171-414
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               120, 33
               

               Conread position:
               171-427
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               10, 176
               

               Conread position:
               173-329
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               173-364
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 69
               

               Conread position:
               173-391
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               125, 97
               

               Conread position:
               173-416
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 193
               

               Conread position:
               173-419
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               84, 92
               

               Conread position:
               173-426
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               113, 73
               

               Conread position:
               173-427
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               116, 93
               

               Conread position:
               173-427
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               114, 68
               

               Conread position:
               173-430
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               145, 11
               

               Conread position:
               173-438
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               43, 47
               

               Conread position:
               173-438
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               47, 78
               

               Conread position:
               174-299
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               174-349
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               174-357
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               174-370
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               117, 32
               

               Conread position:
               174-377
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               130, 38
               

               Conread position:
               174-377
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               130, 38
               

               Conread position:
               174-380
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               20, 30
               

               Conread position:
               174-381
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               118, 27
               

               Conread position:
               174-385
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               112, 67
               

               Conread position:
               174-426
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               108, 211
               

               Conread position:
               174-436
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               253, 91
               

               Conread position:
               174-438
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 32
               

               Conread position:
               174-438
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               118, 47
               

               Conread position:
               175-325
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               122, 31
               

               Conread position:
               175-343
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               71, 31
               

               Conread position:
               175-359
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               128, 15
               

               Conread position:
               175-367
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               108, 137
               

               Conread position:
               175-374
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               29, 91
               

               Conread position:
               175-389
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               176-346
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               125, 59
               

               Conread position:
               176-384
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               71, 21
               

               Conread position:
               176-427
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               125, 19
               

               Conread position:
               176-438
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               118, 204
               

               Conread position:
               178-384
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               179-427
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               124, 27
               

               Conread position:
               181-315
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               181-358
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               83, 74
               

               Conread position:
               181-387
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               19, 48
               

               Conread position:
               181-391
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               121, 190
               

               Conread position:
               181-438
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               106, 9
               

               Conread position:
               182-427
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               182-427
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               110, 24
               

               Conread position:
               183-357
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               109, 42
               

               Conread position:
               184-384
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               192-384
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               192-427
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               50, 14
               

               Conread position:
               193-426
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               98, 116
               

               Conread position:
               197-357
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               104, 122
               

               Conread position:
               200-380
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               98, 117
               

               Conread position:
               201-371
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               201-434
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               45, 117
               

               Conread position:
               214-422
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               73, 166
               

               Conread position:
               223-345
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               67, 93
               

               Conread position:
               256-437
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 60
               
Show alignments to all cow chromosomes.