Cow genome map

Conread name: rdbla0112_h19.y1

Conread position: 155-314
Cow position: chr14:5677208-5677370 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 102

Conread position: 157-300
Cow position: chr14:10114817-10114955 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 158-438
Cow position: chr14:20865459-20865192 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 38, 79

Conread position: 160-438
Cow position: chr14:18979340-18979073 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 141, 15

Conread position: 160-438
Cow position: chr14:29860729-29860996 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 267, 127

Conread position: 162-300
Cow position: chr14:15040073-15039942 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 162-438
Cow position: chr14:43031650-43031926 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 135, 210

Conread position: 164-345
Cow position: chr14:9065749-9065934 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 124, 58

Conread position: 164-427
Cow position: chr14:7813711-7813455 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 128, 98

Conread position: 165-318
Cow position: chr14:16969236-16969080 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 16, 101

Conread position: 165-357
Cow position: chr14:27060320-27060505 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 133, 65

Conread position: 166-412
Cow position: chr14:39058434-39058681 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 115, 18

Conread position: 166-427
Cow position: chr14:10906588-10906829 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 82, 0

Conread position: 167-269
Cow position: chr14:17159626-17159727 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 167-294
Cow position: chr14:24626095-24625968 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 109, 39

Conread position: 167-299
Cow position: chr14:8518124-8517998 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 167-364
Cow position: chr14:6816102-6816285 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 167-366
Cow position: chr14:10692402-10692206 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 136, 38

Conread position: 167-371
Cow position: chr14:19023038-19022831 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 129, 58

Conread position: 167-374
Cow position: chr14:7648162-7647948 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 167-377
Cow position: chr14:37884541-37884337 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 167-389
Cow position: chr14:28605091-28605317 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 76, 84

Conread position: 167-416
Cow position: chr14:2189494-2189738 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 98

Conread position: 167-418
Cow position: chr14:20429433-20429687 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 40, 199

Conread position: 167-426
Cow position: chr14:47604436-47604184 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 128, 36

Conread position: 167-427
Cow position: chr14:47907906-47908159 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 20, 26

Conread position: 167-438
Cow position: chr14:26108492-26108760 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 56

Conread position: 168-423
Cow position: chr14:26448622-26448859 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 27, 0

Conread position: 170-337
Cow position: chr14:38688371-38688204 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 123, 71

Conread position: 170-438
Cow position: chr14:47551412-47551150 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 128, 41

Conread position: 171-425
Cow position: chr14:45849355-45849108 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 134

Conread position: 171-438
Cow position: chr14:11615359-11615091 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 115, 184

Conread position: 172-388
Cow position: chr14:21084204-21084425 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 35, 6

Conread position: 173-347
Cow position: chr14:26153404-26153226 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 128, 0

Conread position: 173-356
Cow position: chr14:41531798-41531612 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 114, 86

Conread position: 173-422
Cow position: chr14:8488061-8488295 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 180, 99

Conread position: 173-427
Cow position: chr14:21691411-21691159 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 106

Conread position: 173-427
Cow position: chr14:23008054-23008291 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 143, 48

Conread position: 173-427
Cow position: chr14:26493737-26493995 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 72, 56

Conread position: 173-438
Cow position: chr14:13928258-13927999 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 20, 11

Conread position: 173-438
Cow position: chr14:44861367-44861109 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 125, 93

Conread position: 174-282
Cow position: chr14:17212595-17212487 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 174-301
Cow position: chr14:29481518-29481391 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 174-340
Cow position: chr14:47693564-47693731 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 117, 91

Conread position: 174-345
Cow position: chr14:36081049-36080877 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 129, 138

Conread position: 174-347
Cow position: chr14:44031900-44032079 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 117, 0

Conread position: 174-358
Cow position: chr14:6582861-6583051 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 151

Conread position: 174-365
Cow position: chr14:47519886-47519691 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 113, 88

Conread position: 174-368
Cow position: chr14:28565342-28565534 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 127, 16

Conread position: 174-374
Cow position: chr14:43566013-43565819 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 129, 0

Conread position: 174-390
Cow position: chr14:6441773-6441992 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 113, 197

Conread position: 174-427
Cow position: chr14:27103951-27104195 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 118, 10

Conread position: 174-427
Cow position: chr14:37333566-37333804 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 58

Conread position: 174-436
Cow position: chr14:20795643-20795908 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 124, 30

Conread position: 174-438
Cow position: chr14:21017982-21018239 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 114, 7

Conread position: 174-438
Cow position: chr14:35700294-35700553 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 142, 178

Conread position: 174-438
Cow position: chr14:37679137-37678875 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 57

Conread position: 174-438
Cow position: chr14:38355055-38355312 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 113, 50

Conread position: 175-325
Cow position: chr14:47600539-47600388 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 175-372
Cow position: chr14:26960547-26960349 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 141, 27

Conread position: 175-377
Cow position: chr14:47138921-47138717 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 126, 142

Conread position: 175-438
Cow position: chr14:23107186-23107454 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 206
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 37, 18

Conread position: 176-300
Cow position: chr14:7613930-7614053 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 179-354
Cow position: chr14:20701946-20701769 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 112, 139

Conread position: 179-389
Cow position: chr14:12559606-12559395 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 119, 46

Conread position: 179-438
Cow position: chr14:6789256-6789511 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 125, 62

Conread position: 179-438
Cow position: chr14:14182203-14182475 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 209

Conread position: 180-436
Cow position: chr14:33553067-33553309 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 12, 29

Conread position: 181-372
Cow position: chr14:21369241-21369432 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 31, 46

Conread position: 181-427
Cow position: chr14:7582570-7582338 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 119, 14

Conread position: 181-427
Cow position: chr14:47973857-47974096 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 185
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 137, 122

Conread position: 184-427
Cow position: chr14:47027496-47027255 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 101, 184

Conread position: 186-339
Cow position: chr14:10935827-10935674 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 127, 76

Conread position: 187-427
Cow position: chr14:34257039-34256810 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 104, 19

Conread position: 190-438
Cow position: chr14:20045433-20045679 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 101, 25

Conread position: 191-324
Cow position: chr14:6582721-6582862 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 193-345
Cow position: chr14:37624885-37624732 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 128
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 105, 124

Conread position: 196-383
Cow position: chr14:22459969-22459786 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 134, 48

Conread position: 202-438
Cow position: chr14:3934259-3934038 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 215-418
Cow position: chr14:22657156-22657348 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 81, 26

Conread position: 217-422
Cow position: chr14:44595215-44595016 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 97, 86

Conread position: 218-427
Cow position: chr14:18449099-18448897 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 9

Conread position: 225-359
Cow position: chr14:28327206-28327069 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 69, 16

Conread position: 231-363
Cow position: chr14:31399518-31399651 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 67, 86

Conread position: 235-427
Cow position: chr14:31784895-31785081 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 31

Conread position: 247-427
Cow position: chr14:25378557-25378381 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 124

Conread position: 251-412
Cow position: chr14:12484621-12484462 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 126

Conread position: 279-427
Cow position: chr14:8518610-8518457 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 18, 92

Show alignments to all cow chromosomes.