Cow genome map

Conread name: rdbla0112_h19.y1

Conread position: 157-427
Cow position: chr16:45693337-45693075 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 49

Conread position: 158-427
Cow position: chr16:11085186-11085454 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 8, 66

Conread position: 159-345
Cow position: chr16:29095051-29094874 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 87, 137

Conread position: 159-438
Cow position: chr16:26134179-26134452 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 8, 49

Conread position: 160-353
Cow position: chr16:31490507-31490313 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 8, 107

Conread position: 160-436
Cow position: chr16:30639517-30639254 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 6, 154

Conread position: 161-345
Cow position: chr16:30930069-30929882 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 162-438
Cow position: chr16:27014090-27013813 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 127, 61

Conread position: 164-328
Cow position: chr16:47116258-47116088 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 165-367
Cow position: chr16:49321141-49320944 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 166-321
Cow position: chr16:20664473-20664323 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 166-392
Cow position: chr16:3259814-3260031 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 40

Conread position: 166-393
Cow position: chr16:47909157-47909389 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 106, 207

Conread position: 166-438
Cow position: chr16:54426346-54426077 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 79, 39

Conread position: 167-293
Cow position: chr16:4708717-4708843 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 167-293
Cow position: chr16:49122082-49122207 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 167-327
Cow position: chr16:34384882-34384723 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 10

Conread position: 167-359
Cow position: chr16:18692964-18693163 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 95

Conread position: 167-387
Cow position: chr16:228313-228536 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 124, 55

Conread position: 167-427
Cow position: chr16:16946348-16946610 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 205

Conread position: 167-427
Cow position: chr16:31419635-31419373 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 19, 217

Conread position: 167-438
Cow position: chr16:18427364-18427101 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 131, 40

Conread position: 171-285
Cow position: chr16:46770804-46770918 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 171-293
Cow position: chr16:10331800-10331678 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 171-377
Cow position: chr16:2618807-2619010 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 145, 132

Conread position: 171-427
Cow position: chr16:10857443-10857695 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 95, 180

Conread position: 171-427
Cow position: chr16:18557083-18557335 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 131, 204

Conread position: 171-438
Cow position: chr16:11008527-11008259 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 66, 52

Conread position: 171-438
Cow position: chr16:38621135-38620873 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 27, 36

Conread position: 171-438
Cow position: chr16:51069735-51070003 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 121, 55

Conread position: 172-345
Cow position: chr16:50114367-50114187 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 173-299
Cow position: chr16:11772071-11772197 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 173-333
Cow position: chr16:10406401-10406559 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 117

Conread position: 173-342
Cow position: chr16:43762326-43762495 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 33

Conread position: 173-350
Cow position: chr16:9510696-9510874 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 125, 144

Conread position: 173-425
Cow position: chr16:11662211-11661965 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 197

Conread position: 173-427
Cow position: chr16:1440605-1440366 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 114, 68

Conread position: 173-427
Cow position: chr16:16524192-16524430 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 91, 0

Conread position: 174-339
Cow position: chr16:10611456-10611615 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 124, 32

Conread position: 174-371
Cow position: chr16:20260649-20260449 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 114, 33

Conread position: 174-374
Cow position: chr16:16055884-16056087 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 126, 51

Conread position: 174-377
Cow position: chr16:8704433-8704237 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 95, 90

Conread position: 174-384
Cow position: chr16:33121781-33121574 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 161, 0

Conread position: 174-385
Cow position: chr16:8315016-8315232 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 79

Conread position: 174-389
Cow position: chr16:51652844-51652634 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 112, 130

Conread position: 174-420
Cow position: chr16:19002914-19003154 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 126, 145

Conread position: 174-423
Cow position: chr16:13660057-13660302 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 112, 150

Conread position: 174-427
Cow position: chr16:53267900-53267652 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 71, 49

Conread position: 174-427
Cow position: chr16:56445245-56445485 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 116, 41

Conread position: 174-436
Cow position: chr16:52577635-52577374 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 126, 203

Conread position: 174-438
Cow position: chr16:23066832-23066576 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 115, 139

Conread position: 175-311
Cow position: chr16:31222712-31222573 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 116, 85

Conread position: 175-391
Cow position: chr16:44540-44327 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 155, 89

Conread position: 175-427
Cow position: chr16:27723406-27723141 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 61, 94

Conread position: 175-427
Cow position: chr16:47368926-47368688 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 131, 28

Conread position: 175-430
Cow position: chr16:3628971-3628737 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 188
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 93, 120

Conread position: 175-431
Cow position: chr16:44580900-44581150 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 112, 28

Conread position: 176-419
Cow position: chr16:28454125-28454354 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 121, 39

Conread position: 179-338
Cow position: chr16:56283117-56282955 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 112, 68

Conread position: 179-417
Cow position: chr16:16546240-16546011 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 112, 22

Conread position: 179-438
Cow position: chr16:26155970-26156221 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 108, 93

Conread position: 181-293
Cow position: chr16:52565589-52565478 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 181-340
Cow position: chr16:25464220-25464066 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 120, 27

Conread position: 181-427
Cow position: chr16:42312554-42312314 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 194
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 72, 61

Conread position: 182-346
Cow position: chr16:5580484-5580314 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 182-380
Cow position: chr16:28827008-28827211 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 105, 196

Conread position: 182-384
Cow position: chr16:15938362-15938566 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 92, 80

Conread position: 182-420
Cow position: chr16:43082072-43082299 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 116, 24

Conread position: 182-436
Cow position: chr16:689872-689623 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 105, 33

Conread position: 183-340
Cow position: chr16:9407710-9407868 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 120, 0

Conread position: 183-384
Cow position: chr16:41711841-41711639 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 35, 186

Conread position: 183-415
Cow position: chr16:44898593-44898810 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 120, 31

Conread position: 183-438
Cow position: chr16:36930150-36930404 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 106, 65

Conread position: 184-438
Cow position: chr16:12072802-12072556 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 118, 99

Conread position: 190-427
Cow position: chr16:32837387-32837619 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 128, 113

Conread position: 192-348
Cow position: chr16:44693025-44693185 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 110, 0

Conread position: 192-361
Cow position: chr16:39156275-39156454 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 67, 76

Conread position: 192-438
Cow position: chr16:21462185-21461945 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 75

Conread position: 193-438
Cow position: chr16:44722877-44723111 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 96, 56

Conread position: 198-343
Cow position: chr16:23978280-23978430 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 122
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 99, 0

Conread position: 198-372
Cow position: chr16:15320330-15320505 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 94, 118

Conread position: 198-384
Cow position: chr16:55586457-55586642 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 141, 0

Conread position: 198-427
Cow position: chr16:4499577-4499364 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 94, 27

Conread position: 199-382
Cow position: chr16:5511959-5511772 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 105, 161

Conread position: 200-425
Cow position: chr16:51281634-51281401 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 84, 62

Conread position: 200-427
Cow position: chr16:22872229-22872443 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 201-376
Cow position: chr16:28266882-28267053 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 97, 14

Conread position: 201-427
Cow position: chr16:10303600-10303819 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 165, 0

Conread position: 202-392
Cow position: chr16:23163426-23163621 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 94, 0

Conread position: 202-438
Cow position: chr16:37719308-37719073 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 88, 39

Conread position: 204-360
Cow position: chr16:47192305-47192146 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 208-385
Cow position: chr16:19977107-19976932 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 89, 110

Conread position: 213-382
Cow position: chr16:5333456-5333622 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 90, 28

Conread position: 217-385
Cow position: chr16:9445094-9444919 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 69, 115

Conread position: 217-438
Cow position: chr16:52222197-52222412 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 86, 20

Conread position: 227-391
Cow position: chr16:56104789-56104956 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 8, 19

Conread position: 234-427
Cow position: chr16:42257565-42257378 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 69, 85

Conread position: 242-436
Cow position: chr16:4979912-4979719 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 36, 131

Conread position: 248-427
Cow position: chr16:34210301-34210480 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 68

Conread position: 251-424
Cow position: chr16:11153091-11153259 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 67

Conread position: 253-427
Cow position: chr16:41608706-41608541 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 290-436
Cow position: chr16:17606354-17606208 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 104, 137

Conread position: 296-438
Cow position: chr16:13792608-13792746 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 123, 83

Conread position: 313-438
Cow position: chr16:13027706-13027588 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 114, 59

Show alignments to all cow chromosomes.