Cow genome map


           Conread name:
           rdbla0112_h19.y1
        

               Conread position:
               133-377
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               24, 44
               

               Conread position:
               152-289
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               154-425
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               205
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               20, 89
               

               Conread position:
               157-427
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               135, 79
               

               Conread position:
               160-367
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               30, 7
               

               Conread position:
               160-427
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 41
               

               Conread position:
               160-427
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               44, 82
               

               Conread position:
               163-391
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               39, 107
               

               Conread position:
               166-293
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               166-373
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               166-422
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               166-427
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               47, 12
               

               Conread position:
               166-427
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               160, 40
               

               Conread position:
               167-293
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               167-334
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               98, 88
               

               Conread position:
               167-373
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               167-374
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               69, 37
               

               Conread position:
               167-376
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               97, 86
               

               Conread position:
               167-427
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               20, 79
               

               Conread position:
               167-427
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 39
               

               Conread position:
               167-429
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               66, 118
               

               Conread position:
               167-438
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               137, 36
               

               Conread position:
               167-438
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               115, 36
               

               Conread position:
               171-261
               

               Cow position:
               
               

               Alignm length:
               91
               

               Alignm identity:
               80
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               171-299
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               171-366
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               54, 158
               

               Conread position:
               171-383
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               115, 46
               

               Conread position:
               171-427
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               116, 34
               

               Conread position:
               171-438
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               121, 36
               

               Conread position:
               172-435
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               78, 27
               

               Conread position:
               172-438
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               68, 7
               

               Conread position:
               173-301
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               173-338
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               128, 33
               

               Conread position:
               173-367
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               173-373
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               113, 68
               

               Conread position:
               173-377
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               173-424
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               173-426
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               173-427
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               119, 210
               

               Conread position:
               173-427
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               114, 43
               

               Conread position:
               173-427
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               114, 159
               

               Conread position:
               173-427
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               101, 60
               

               Conread position:
               173-438
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               173-438
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               174-290
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               174-301
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               174-334
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               174-339
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 53
               

               Conread position:
               174-350
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               117, 72
               

               Conread position:
               174-359
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               124, 67
               

               Conread position:
               174-359
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               174-371
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               174-377
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               52, 32
               

               Conread position:
               174-381
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               174-389
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               113, 24
               

               Conread position:
               174-414
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               121, 48
               

               Conread position:
               174-415
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 0
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               199
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               47, 32
               

               Conread position:
               174-438
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               115, 213
               

               Conread position:
               174-438
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               139, 67
               

               Conread position:
               175-374
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               125, 22
               

               Conread position:
               175-420
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               73, 33
               

               Conread position:
               175-427
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               175-427
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               120, 31
               

               Conread position:
               175-438
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               129, 29
               

               Conread position:
               179-338
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               179-384
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               66, 88
               

               Conread position:
               180-403
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               121, 31
               

               Conread position:
               180-427
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               121, 189
               

               Conread position:
               180-430
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               181-355
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               105, 74
               

               Conread position:
               181-377
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               57, 147
               

               Conread position:
               181-412
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               110, 61
               

               Conread position:
               181-427
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               189
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               110, 42
               

               Conread position:
               182-329
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               131, 121
               

               Conread position:
               184-425
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               187
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               186-334
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               187-438
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               115, 66
               

               Conread position:
               190-370
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               15, 52
               

               Conread position:
               192-386
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               193-301
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               196-422
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               102, 45
               

               Conread position:
               196-438
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               93, 45
               

               Conread position:
               197-342
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               94, 44
               

               Conread position:
               197-422
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               46, 171
               

               Conread position:
               198-427
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               56, 43
               

               Conread position:
               203-377
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               95, 114
               

               Conread position:
               204-328
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               204-338
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 113
               

               Conread position:
               206-427
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               92, 59
               

               Conread position:
               208-422
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               208-427
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               93, 42
               

               Conread position:
               213-438
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               223-438
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               75, 43
               

               Conread position:
               226-430
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               27, 35
               

               Conread position:
               228-430
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               90, 38
               

               Conread position:
               233-427
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               71, 135
               

               Conread position:
               233-427
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               71, 135
               

               Conread position:
               235-427
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               62, 67
               

               Conread position:
               237-427
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               66, 51
               

               Conread position:
               246-426
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               52, 129
               
Show alignments to all cow chromosomes.