Cow genome map


           Conread name:
           rdbla0112_h19.y1
        

               Conread position:
               160-359
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               156, 30
               

               Conread position:
               160-363
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               128, 63
               

               Conread position:
               160-438
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               133, 43
               

               Conread position:
               161-364
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               21, 30
               

               Conread position:
               161-426
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               142, 110
               

               Conread position:
               162-387
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               164-342
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               120, 67
               

               Conread position:
               164-427
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 77
               

               Conread position:
               164-438
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               100, 37
               

               Conread position:
               165-287
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               166-359
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               135, 39
               

               Conread position:
               166-372
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               128, 99
               

               Conread position:
               166-373
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               123, 56
               

               Conread position:
               166-438
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               51, 157
               

               Conread position:
               167-293
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               167-377
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               167-427
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               206
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               128, 215
               

               Conread position:
               167-427
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 151
               

               Conread position:
               167-431
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               67, 8
               

               Conread position:
               169-426
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               129, 37
               

               Conread position:
               171-285
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               171-427
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               120, 33
               

               Conread position:
               171-427
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               116, 160
               

               Conread position:
               171-436
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               66, 199
               

               Conread position:
               173-339
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               122, 30
               

               Conread position:
               173-365
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               156
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               173-373
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               173-380
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               115, 14
               

               Conread position:
               173-389
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               145, 31
               

               Conread position:
               173-391
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               130, 200
               

               Conread position:
               173-391
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               117, 89
               

               Conread position:
               173-424
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               130, 19
               

               Conread position:
               173-427
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               145, 33
               

               Conread position:
               173-427
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               74, 212
               

               Conread position:
               173-427
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               118, 78
               

               Conread position:
               173-431
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               61, 200
               

               Conread position:
               173-431
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               125, 74
               

               Conread position:
               173-438
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               98, 207
               

               Conread position:
               174-301
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               112, 61
               

               Conread position:
               174-325
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               117, 45
               

               Conread position:
               174-370
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               32, 45
               

               Conread position:
               174-377
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               116, 157
               

               Conread position:
               174-408
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               121, 91
               

               Conread position:
               174-412
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               115, 29
               

               Conread position:
               174-415
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               126, 178
               

               Conread position:
               174-426
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               132, 92
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               83, 27
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               142, 32
               

               Conread position:
               174-438
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               113, 67
               

               Conread position:
               175-339
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               175-427
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               112, 172
               

               Conread position:
               175-427
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               72, 31
               

               Conread position:
               175-438
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               121, 61
               

               Conread position:
               176-382
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               116, 62
               

               Conread position:
               179-373
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               122, 28
               

               Conread position:
               180-324
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 67
               

               Conread position:
               181-426
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               182-299
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               184-431
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               116, 92
               

               Conread position:
               186-425
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 19
               

               Conread position:
               187-386
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               111, 62
               

               Conread position:
               192-438
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               109, 164
               

               Conread position:
               194-438
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               97, 145
               

               Conread position:
               197-384
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               92, 120
               

               Conread position:
               197-424
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               98, 44
               

               Conread position:
               197-438
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               95, 136
               

               Conread position:
               198-334
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               94, 17
               

               Conread position:
               200-364
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               201-420
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               86, 149
               

               Conread position:
               207-431
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               84, 158
               

               Conread position:
               210-373
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               83, 97
               

               Conread position:
               211-427
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               76, 20
               

               Conread position:
               211-438
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               90, 140
               

               Conread position:
               212-438
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               75, 67
               

               Conread position:
               217-377
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               233-427
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               68, 99
               

               Conread position:
               243-425
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               58, 136
               

               Conread position:
               244-426
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               52, 146
               

               Conread position:
               249-438
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               44, 76
               

               Conread position:
               253-436
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               64, 50
               

               Conread position:
               253-438
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               35, 70
               
Show alignments to all cow chromosomes.