Cow genome map


           Conread name:
           rdbla0112_h19.y1
        

               Conread position:
               155-427
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               146, 37
               

               Conread position:
               158-345
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               129, 19
               

               Conread position:
               159-426
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               112, 210
               

               Conread position:
               160-346
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               14, 44
               

               Conread position:
               160-359
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               7, 104
               

               Conread position:
               162-427
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               141, 37
               

               Conread position:
               165-438
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 9
               

               Conread position:
               166-438
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               23, 76
               

               Conread position:
               166-438
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               141, 74
               

               Conread position:
               167-271
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               84
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               167-293
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               167-386
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               127, 39
               

               Conread position:
               167-427
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               198
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               15, 91
               

               Conread position:
               167-427
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               133, 39
               

               Conread position:
               167-430
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               167-438
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               167-438
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               73, 10
               

               Conread position:
               171-421
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               127, 74
               

               Conread position:
               171-436
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               115, 133
               

               Conread position:
               171-436
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 35
               

               Conread position:
               171-438
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               132, 63
               

               Conread position:
               172-370
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               145, 63
               

               Conread position:
               172-384
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               115, 174
               

               Conread position:
               173-348
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 22
               

               Conread position:
               173-366
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               173-412
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               24, 67
               

               Conread position:
               173-438
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               131, 101
               

               Conread position:
               174-299
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               62, 97
               

               Conread position:
               174-362
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               121, 32
               

               Conread position:
               174-378
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               112, 29
               

               Conread position:
               174-387
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               129, 75
               

               Conread position:
               174-388
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               113, 161
               

               Conread position:
               174-416
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               117, 194
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               174-427
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               113, 207
               

               Conread position:
               174-438
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               203
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               115, 180
               

               Conread position:
               174-438
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               174-438
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 176
               

               Conread position:
               174-438
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               97, 51
               

               Conread position:
               175-338
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               125, 66
               

               Conread position:
               175-338
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               139, 66
               

               Conread position:
               175-417
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               58, 67
               

               Conread position:
               175-427
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               127, 15
               

               Conread position:
               175-438
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               126, 29
               

               Conread position:
               176-338
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               176-418
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               122, 5
               

               Conread position:
               179-437
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               58, 52
               

               Conread position:
               179-438
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               107, 196
               

               Conread position:
               181-422
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               110, 44
               

               Conread position:
               181-424
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               106, 76
               

               Conread position:
               182-377
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               134, 39
               

               Conread position:
               182-427
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 8
               

               Conread position:
               182-436
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               128, 24
               

               Conread position:
               182-437
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               110, 135
               

               Conread position:
               182-438
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               85, 22
               

               Conread position:
               182-438
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               82, 59
               

               Conread position:
               185-427
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               112, 56
               

               Conread position:
               187-338
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               190-427
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               126, 22
               

               Conread position:
               191-425
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               14, 189
               

               Conread position:
               192-377
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               78, 50
               

               Conread position:
               201-331
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               97, 14
               

               Conread position:
               205-381
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               54, 6
               

               Conread position:
               207-438
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               111, 15
               

               Conread position:
               211-378
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               87, 106
               

               Conread position:
               217-427
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               81, 52
               

               Conread position:
               220-391
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               78, 7
               

               Conread position:
               223-374
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               68, 95
               

               Conread position:
               225-391
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               226-384
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               75, 147
               

               Conread position:
               233-384
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               67, 76
               

               Conread position:
               233-427
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               240-427
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               58, 26
               

               Conread position:
               247-427
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               44, 124
               

               Conread position:
               249-436
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               304-418
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               63, 0
               
Show alignments to all cow chromosomes.